DN621115

Overview
NameDN621115
Unique NameDN621115
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length785
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6021 contig Csv1_Contig6021:1..785. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of DN621115 vs. ExPASy Swiss-Prot
Match: NOG1_ENCCU (Nucleolar GTP-binding protein 1 OS=Encephalitozoon cuniculi GN=NOG1 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.803e-11
Identity = 56/198 (28.28%), Postives = 88/198 (44.44%), Query Frame = 3 
Query:  195 GAFQKLPMVMPSVDI-LSSALKKAKRVSATKGISNIAKRERNKAAKQLDALMKELAVPLRDYVANFPNRKCLHPYERSLTELTLGDGNYEKVLKNVDALRKKVVSAGKEHASLCAKSLSKREAEERLSEGLQRLEEVFNREGKAVDDLLNIAKTLRAMPVVDLETPTLCLVGAPNVRKSSLVRVISTGKPEVCNYPFT 785
            G    +P+ M  +DI LS   K+   V   +   NI K  R    +++     E A  L   + +FP  + +HP+   L  +     +Y+  L +V+A +  +    KE   L   + S    ++     L R+     + GK ++ L  +   +  +P +DL   TL + G PNV KSS VR IS    EV  YPFT
Sbjct:    6 GYITPVPLNMELIDISLSKTQKRTPTVIHPQ--YNIVKI-RMFYMRKVKHAGNEFASRLGTILTDFPRIEDIHPFYGDLINVLYDRDHYKLALGHVNAAKNGIEKVSKEFVKLLKFADSLYRCKQLKRAALGRMASAAKKLGKTLEYLEEVRMHMSRLPSIDLSGRTLLVCGFPNVGKSSFVRKISRADVEVQPYPFT 200
The following BLAST results are available for this feature:
BLAST of DN621115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
NOG1_ENCCU7.803e-1128.28Nucleolar GTP-binding protein 1 OS=Encephalitozoon... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_06E07_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621115 ID=DN621115; Name=DN621115; organism=Citrus sinensis; type=EST; length=785bp
GTTTAAGCCATTTACAGCTATGGCAAATTCCTCGCCCTAAAATTCATCTT
CGAAAATCTCGATCGTCACCAGGCTTATACGCGTCTCCATCAATAACAGA
ATATCGGAGCTCGTGCTTTTGTAGTCAACAAGCGCAGGCCGCCGCCCGCG
GAGTTTTGCAGAACAAGCCGATGGTGAAGGAAATTGAAAGTGTTGGTGCA
TTTCAAAAATTACCTATGGTGATGCCATCTGTTGATATTTTGTCCTCGGC
TTTAAAGAAGGCCAAAAGAGTCTCAGCAACCAAAGGCATTTCCAATATCG
CCAAGCGAGAGAGGAACAAAGCTGCTAAGCAACTTGATGCGCTGATGAAA
GAATTGGCAGTTCCATTGAGAGACTATGTTGCAAATTTTCCTAATAGAAA
ATGTTTGCACCCTTATGAACGGTCTCTTACTGAGCTGACACTTGGGGATG
GAAACTATGAAAAGGTTTTGAAAAATGTGGATGCTCTGAGAAAGAAGGTT
GTATCAGCTGGAAAAGAGCATGCTTCTCTCTGTGCAAAGTCTTTGTCAAA
AAGAGAAGCGGAGGAAAGGTTGAGTGAGGGTTTACAGAGACTCGAGGAAG
TATTTAACCGTGAAGGAAAAGCTGTTGATGATTTATTGAACATTGCCAAG
ACTTTGCGGGCAATGCCTGTTGTTGATCTTGAAACACCTACTCTCTGTCT
CGTTGGAGCTCCTAATGTGAGGAAGTCATCCTTGGTTCGTGTAATCTCCA
CTGGAAAGCCTGAGGTCTGCAACTACCCATTTACC
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