DN621102
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN621102 vs. ExPASy Swiss-Prot
Match: UCRI1_TOBAC (Cytochrome b-c1 complex subunit Rieske-1, mitochondrial (Fragment) OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 6.496e-36 Identity = 73/89 (82.02%), Postives = 81/89 (91.01%), Query Frame = 1 Query: 235 RAFSSESLTPRNEESLVPGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILNFVLSMSASKDVLA 501 R FSS S++P ++ LVP +P TVAA+KNPTSKIVYDE+NHERYPPGDPSKRAFAYFVLTGGRFVYASL+RLLIL FVLSMSASKDVLA Sbjct: 44 RGFSSNSVSPAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLMRLLILKFVLSMSASKDVLA 132
BLAST of DN621102 vs. ExPASy Swiss-Prot
Match: UCRI5_TOBAC (Cytochrome b-c1 complex subunit Rieske-5, mitochondrial OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 3.224e-35 Identity = 74/98 (75.51%), Postives = 83/98 (84.69%), Query Frame = 1 Query: 208 LGPQFQLPCRAFSSESLTPRNEESLVPGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILNFVLSMSASKDVLA 501 L QF R FSS S++P ++ LV +PATVAA+KNP+SKIVYD+ NHERYPPGDPSKRAFAYFVLTGGRFVYASL+RLLIL FVLSMSASKDVLA Sbjct: 45 LASQFLDQFRGFSSNSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLA 142
BLAST of DN621102 vs. ExPASy Swiss-Prot
Match: UCRI3_TOBAC (Cytochrome b-c1 complex subunit Rieske-3, mitochondrial OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 3.224e-35 Identity = 74/98 (75.51%), Postives = 83/98 (84.69%), Query Frame = 1 Query: 208 LGPQFQLPCRAFSSESLTPRNEESLVPGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILNFVLSMSASKDVLA 501 L QF R FSS S++P ++ LV +PATVAA+KNP+SKIVYD+ NHERYPPGDPSKRAFAYFVLTGGRFVYASL+RLLIL FVLSMSASKDVLA Sbjct: 45 LASQFLDQFRGFSSNSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLA 142
BLAST of DN621102 vs. ExPASy Swiss-Prot
Match: UCRI2_TOBAC (Cytochrome b-c1 complex subunit Rieske-2, mitochondrial OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 4.210e-35 Identity = 72/89 (80.90%), Postives = 80/89 (89.89%), Query Frame = 1 Query: 235 RAFSSESLTPRNEESLVPGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILNFVLSMSASKDVLA 501 R FSS S++ ++ LVP +P TVAA+KNPTSKIVYDE+NHERYPPGDPSKRAFAYFVLTGGRFVYASL+RLLIL FVLSMSASKDVLA Sbjct: 58 RGFSSNSVSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLA 146
BLAST of DN621102 vs. ExPASy Swiss-Prot
Match: UCRI4_TOBAC (Cytochrome b-c1 complex subunit Rieske-4, mitochondrial OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 1.600e-34 Identity = 71/87 (81.61%), Postives = 79/87 (90.80%), Query Frame = 1 Query: 241 FSSESLTPRNEESLVPGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILNFVLSMSASKDVLA 501 FSS S++ ++ LVP +P TVAA+KNPTSKIVYDE+NHERYPPGDPSKRAFAYFVLTGGRFVYASL+RLLIL FVLSMSASKDVLA Sbjct: 24 FSSNSVSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLA 110
BLAST of DN621102 vs. ExPASy Swiss-Prot
Match: UCRI_MAIZE (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Zea mays PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 6.080e-34 Identity = 70/95 (73.68%), Postives = 83/95 (87.37%), Query Frame = 1 Query: 220 FQLPCRAFSS-ESLTPRNEESLVPGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILNFVLSMSASKDVLA 501 F + R FSS E++ PRN+++ + +PATVAAVKNP K+VYDEYNHERYPPGDPSKRAFAYFVL+GGRF+YASL+RLL+L FVLSMSASKDVLA Sbjct: 53 FFVASRGFSSTETVVPRNQDAGLADLPATVAAVKNPNPKVVYDEYNHERYPPGDPSKRAFAYFVLSGGRFIYASLLRLLVLKFVLSMSASKDVLA 147
BLAST of DN621102 vs. ExPASy Swiss-Prot
Match: UCRI_SOLTU (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Solanum tuberosum GN=FES1 PE=1 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.037e-33 Identity = 70/89 (78.65%), Postives = 79/89 (88.76%), Query Frame = 1 Query: 235 RAFSSESLTPRNEESLVPGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILNFVLSMSASKDVLA 501 R FSS S++P ++ LV +PATVAA+KNP+SKIVYD+ NHERYPPGDPSKRAFAYFVLTGGRFVYAS +RLLIL FVLSMSASKDVLA Sbjct: 51 RGFSSNSVSPAHQLGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTGGRFVYASSVRLLILKFVLSMSASKDVLA 139 The following BLAST results are available for this feature:
BLAST of DN621102 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DN621102 ID=DN621102; Name=DN621102; organism=Citrus sinensis; type=EST; length=502bpback to top |