DN621100
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN621100 vs. ExPASy Swiss-Prot
Match: LE14B_PRUAR (LEC14B homolog OS=Prunus armeniaca PE=2 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.074e-42 Identity = 77/111 (69.37%), Postives = 89/111 (80.18%), Query Frame = -1 Query: 199 KHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPGNGEAAPPLNKKRIRRRQ 531 KHP DQS+ATY+GH VLRTLIRC+ SP YSTGQKYIYTGS D CVY+YDLV+G QVA L +H PVRDCSWHP PMLVSSSWDG + RWEFPG+ + P L + R RR++ Sbjct: 363 KHPNDQSLATYRGHGVLRTLIRCYLSPAYSTGQKYIYTGSSDHCVYIYDLVTGAQVARLNHHEGPVRDCSWHPLYPMLVSSSWDGTIARWEFPGD-DQVPTLERPRARRKE 472
BLAST of DN621100 vs. ExPASy Swiss-Prot
Match: LE14B_LITER (LEC14B protein OS=Lithospermum erythrorhizon PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 7.698e-41 Identity = 75/109 (68.81%), Postives = 92/109 (84.40%), Query Frame = -1 Query: 205 KHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPGNGEAAPPLNKKRIRR 531 KHP D S ATYKGHSVL TLIRC+FSP YSTGQKYIYTGSHD+ VY+YDLV+G+QV+ L+YH + VRDCSWHP+ PMLVSSS+DG++V+WE+ GN EA N +R++R Sbjct: 365 KHPSDLSGATYKGHSVLCTLIRCYFSPDYSTGQKYIYTGSHDANVYIYDLVTGDQVSTLQYHKATVRDCSWHPNYPMLVSSSFDGEIVKWEYRGNDEAPVQGNNQRLQR 473
BLAST of DN621100 vs. ExPASy Swiss-Prot
Match: DCA11_PONAB (DDB1- and CUL4-associated factor 11 OS=Pongo abelii GN=DCAF11 PE=2 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 8.550e-24 Identity = 50/92 (54.35%), Postives = 65/92 (70.65%), Query Frame = -1 Query: 256 KHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEF 531 K P D S+ TY+GH VL TLIRC FSP++STGQ++IY+G V VYDL+SG V L H + VRD SWHP + +VSSSWDG++ W++ Sbjct: 421 KLPGDSSLMTYRGHGVLHTLIRCRFSPIHSTGQQFIYSGCSTGKVVVYDLLSGHIVKKLTNHKACVRDVSWHPFEEKIVSSSWDGNLRLWQY 512
BLAST of DN621100 vs. ExPASy Swiss-Prot
Match: DCA11_HUMAN (DDB1- and CUL4-associated factor 11 OS=Homo sapiens GN=DCAF11 PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 8.550e-24 Identity = 50/92 (54.35%), Postives = 65/92 (70.65%), Query Frame = -1 Query: 256 KHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEF 531 K P D S+ TY+GH VL TLIRC FSP++STGQ++IY+G V VYDL+SG V L H + VRD SWHP + +VSSSWDG++ W++ Sbjct: 421 KLPGDSSLMTYRGHGVLHTLIRCRFSPIHSTGQQFIYSGCSTGKVVVYDLLSGHIVKKLTNHKACVRDVSWHPFEEKIVSSSWDGNLRLWQY 512
BLAST of DN621100 vs. ExPASy Swiss-Prot
Match: DCA11_BOVIN (DDB1- and CUL4-associated factor 11 OS=Bos taurus GN=DCAF11 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.458e-23 Identity = 50/92 (54.35%), Postives = 64/92 (69.57%), Query Frame = -1 Query: 256 KHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEF 531 K P D S+ TY+GH VL TLIRC FSP +STGQ++IY+G V VYDL+SG V L H + VRD SWHP + +VSSSWDG++ W++ Sbjct: 421 KLPGDSSLMTYRGHGVLHTLIRCRFSPTHSTGQQFIYSGCSTGKVVVYDLLSGHVVKKLTTHKACVRDVSWHPFEEKIVSSSWDGNLRLWQY 512
BLAST of DN621100 vs. ExPASy Swiss-Prot
Match: DCA11_MOUSE (DDB1- and CUL4-associated factor 11 OS=Mus musculus GN=Dcaf11 PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.905e-23 Identity = 50/92 (54.35%), Postives = 64/92 (69.57%), Query Frame = -1 Query: 256 KHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEF 531 K P D S+ TY+GH VL TLIRC FSP +STGQ++IY+G V VYDL+SG V L H + VRD SWHP + +VSSSWDG++ W++ Sbjct: 421 KLPGDSSLMTYRGHGVLHTLIRCRFSPAHSTGQQFIYSGCSTGKVVVYDLLSGHIVKKLTNHKACVRDVSWHPFEEKIVSSSWDGNLRLWQY 512
BLAST of DN621100 vs. ExPASy Swiss-Prot
Match: DCA11_RAT (DDB1- and CUL4-associated factor 11 OS=Rattus norvegicus GN=Dcaf11 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.488e-23 Identity = 50/92 (54.35%), Postives = 63/92 (68.48%), Query Frame = -1 Query: 256 KHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEF 531 K P D S+ TY+GH VL TLIRC FSP +STGQ++IY+G V VYDL+SG V L H + VRD SWHP + +VSSSWDG + W++ Sbjct: 421 KLPGDSSLMTYRGHGVLHTLIRCRFSPAHSTGQQFIYSGCSTGKVVVYDLLSGHIVKKLTNHKACVRDVSWHPFEEKIVSSSWDGSLRLWQY 512
BLAST of DN621100 vs. ExPASy Swiss-Prot
Match: DCA11_CAEEL (DDB1- and CUL4-associated factor 11 homolog OS=Caenorhabditis elegans GN=wdr-23 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.669e-19 Identity = 50/98 (51.02%), Postives = 64/98 (65.31%), Query Frame = -1 Query: 232 DQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDG--DVVRWEFPGNGEAAP 519 D SV T +GHSVL TL+R +FSP STG++YIYTG V VYD++SG LK HT+ VR+C WHP++ +VSS+WDG V W+ G AP Sbjct: 427 DTSVMTLRGHSVLHTLVRANFSPE-STGRRYIYTGCARGEVVVYDIMSGTVSRRLKGHTAVVRECDWHPTENEIVSSAWDGVTTVWTWDERQEGVIAP 523
BLAST of DN621100 vs. ExPASy Swiss-Prot
Match: DCA11_CAEBR (DDB1- and CUL4-associated factor 11 homolog OS=Caenorhabditis briggsae GN=wdr-23 PE=3 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 9.156e-18 Identity = 46/98 (46.94%), Postives = 61/98 (62.24%), Query Frame = -1 Query: 232 DQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDG--DVVRWEFPGNGEAAP 519 D SV T +GHSVL TL+R FSP +TG+++IYTG + VYD+V+G LK H + VR+C WHP + +VS+SWDG V W+ G AP Sbjct: 406 DTSVMTLRGHSVLHTLVRAKFSPE-NTGRRFIYTGCARGEIVVYDIVTGTVSRRLKGHQAVVRECDWHPQENEIVSTSWDGVTTVWTWDERAEGVIAP 502 The following BLAST results are available for this feature:
BLAST of DN621100 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DN621100 ID=DN621100; Name=DN621100; organism=Citrus sinensis; type=EST; length=531bpback to top |