DN621099

Overview
NameDN621099
Unique NameDN621099
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length717
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621099 vs. ExPASy Swiss-Prot
Match: PR1B4_ARATH (PRA1 family protein B4 OS=Arabidopsis thaliana GN=PRA1B4 PE=1 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 7.028e-53
Identity = 100/138 (72.46%), Postives = 119/138 (86.23%), Query Frame = -2
Query:  303 ESFSEATLRIRKNYSYFRVNYLTXXXXXXAFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAHGAFRVPEDLFLDEQEPSASTGFLSFIGG 716
            ES S+A +RIRKNYSYF+VNYLT       FSL+T+PFSL+ L+ LLASW+FLYLFRP+DQP+V+FGRTFS+RETLG LI+ SIFV FLT VGS+L+SA+M+G  LICAHGAFR PEDLFLDEQEP A+TGFLSF+GG
Sbjct:   70 ESISDAAVRIRKNYSYFKVNYLTVATAIVGFSLVTHPFSLVFLLCLLASWLFLYLFRPTDQPIVLFGRTFSDRETLGCLILFSIFVIFLTDVGSVLVSAMMIGVALICAHGAFRAPEDLFLDEQEP-AATGFLSFLGG 206          
BLAST of DN621099 vs. ExPASy Swiss-Prot
Match: PR1B3_ARATH (PRA1 family protein B3 OS=Arabidopsis thaliana GN=PRA1B3 PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.735e-46
Identity = 91/138 (65.94%), Postives = 114/138 (82.61%), Query Frame = -2
Query:  303 ESFSEATLRIRKNYSYFRVNYLTXXXXXXAFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAHGAFRVPEDLFLDEQEPSASTGFLSFIGG 716
            ES ++A  RIR+N  YF+VNY+T      A SL+++PFSLL+L+ L  +WIFLYLFRPSDQPLVV GRTFS+RETLGVL++L+I V FLTSVGS+L SA+M+G G++C HGAFRVPEDLFLD+QEP A+TG LSF+ G
Sbjct:   63 ESLTDAYSRIRRNLPYFKVNYVTIVSLVLALSLLSHPFSLLVLLCLFCAWIFLYLFRPSDQPLVVLGRTFSDRETLGVLVILTIVVVFLTSVGSLLTSALMIGFGIVCLHGAFRVPEDLFLDDQEP-ANTGLLSFLSG 199          
BLAST of DN621099 vs. ExPASy Swiss-Prot
Match: PR1B1_ARATH (PRA1 family protein B1 OS=Arabidopsis thaliana GN=PRA1B1 PE=1 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 4.566e-44
Identity = 87/138 (63.04%), Postives = 110/138 (79.71%), Query Frame = -2
Query:  303 ESFSEATLRIRKNYSYFRVNYLTXXXXXXAFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAHGAFRVPEDLFLDEQEPSASTGFLSFIGG 716
            ES ++A  RIRKN +YF+VNY+       AFSL ++P SLL+L+GLL  W+FLYLFRPSDQPLVVFGRTFS+RETL  L++ +I V F+TSVGS+L SA+M+G  ++C HGAF VP+DLFLDEQEP A+ G LSF+GG
Sbjct:   60 ESLTDALSRIRKNLAYFKVNYVAIVSLVLAFSLFSHPLSLLVLIGLLGGWMFLYLFRPSDQPLVVFGRTFSDRETLLALVLSTIVVVFMTSVGSLLTSALMIGVAIVCVHGAFVVPDDLFLDEQEP-ANAGLLSFLGG 196          
BLAST of DN621099 vs. ExPASy Swiss-Prot
Match: PR1B5_ARATH (PRA1 family protein B5 OS=Arabidopsis thaliana GN=PRA1B5 PE=1 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.960e-43
Identity = 88/137 (64.23%), Postives = 108/137 (78.83%), Query Frame = -2
Query:  306 ESFSEATLRIRKNYSYFRVNYLTXXXXXXAFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAHGAFRVPEDLFLDEQEPSASTGFLSFIG 716
            +S SEA  R RKN SYFRVNY+        FSL+ +PFSL++L+ L ASW+FLYLFRPSD+PL++FGR+FSE ETLG LI+ +I V F TSVGS+LISA+M+G   IC HGAFR P+DLFLDEQ+ +AS GFLSFIG
Sbjct:   70 DSLSEAGTRFRKNSSYFRVNYVCIVALILGFSLLAHPFSLILLLCLAASWLFLYLFRPSDRPLILFGRSFSEYETLGGLILSTIAVIFFTSVGSVLISALMIGIATICVHGAFRAPDDLFLDEQDHAAS-GFLSFIG 205          
BLAST of DN621099 vs. ExPASy Swiss-Prot
Match: PR1B2_ARATH (PRA1 family protein B2 OS=Arabidopsis thaliana GN=PRA1B2 PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.171e-41
Identity = 83/137 (60.58%), Postives = 109/137 (79.56%), Query Frame = -2
Query:  306 ESFSEATLRIRKNYSYFRVNYLTXXXXXXAFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAHGAFRVPEDLFLDEQEPSASTGFLSFIG 716
            +S +++  RIRKN +YF+VNY        AFSL+++PFSLL+L+ LL SW+FLYLFR SDQPLV+FGR+FS+RETL  L++ +I V F+TSVGS+L SA+ +G  ++C HGAFRVP+DLFLDEQEP A+ G LSFIG
Sbjct:   62 DSLTDSFSRIRKNLAYFKVNYSAIVSLVLAFSLLSHPFSLLVLLSLLGSWMFLYLFRSSDQPLVLFGRSFSDRETLLGLVLTTIVVVFMTSVGSLLTSALTIGIAIVCLHGAFRVPDDLFLDEQEP-ANAGLLSFIG 197          
BLAST of DN621099 vs. ExPASy Swiss-Prot
Match: PR1B6_ARATH (PRA1 family protein B6 OS=Arabidopsis thaliana GN=PRA1B6 PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.427e-37
Identity = 77/134 (57.46%), Postives = 98/134 (73.13%), Query Frame = -2
Query:  312 SFSEATLRIRKNYSYFRVNYLTXXXXXXAFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAHGAFRVPEDLFLDEQEPSASTGFLSF 713
            S SEAT R+RKN+SYFR NY+T      A SL+T+PF+L +L  L ASW+FLY FRP+DQPLV+ GRTFS+ ETLG+L + ++ V F+TSVGS+L+S + VG   +  HGAFR PEDLFL+EQE   S  F  F
Sbjct:   61 SLSEATSRVRKNFSYFRANYITLVAILLAASLLTHPFALFLLASLAASWLFLYFFRPADQPLVIGGRTFSDLETLGILCLSTVVVMFMTSVGSLLMSTLAVGIMGVAIHGAFRAPEDLFLEEQEAIGSGLFAFF 194          
BLAST of DN621099 vs. ExPASy Swiss-Prot
Match: PR1F1_ARATH (PRA1 family protein F1 OS=Arabidopsis thaliana GN=PRA1F1 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.341e-18
Identity = 49/119 (41.18%), Postives = 68/119 (57.14%), Query Frame = -2
Query:  336 RIRKNYSYFRVNYLTXXXXXXAFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAHGAFRVPEDLFLDEQEPS 692
            RIR N  YF+ NY          SLI NPFSLL+L+ LL +W+FLY  R  D+PL VF R    R  L ++ V+++ + FLT     +  A++ GA  + +H A R  EDLF  ++E S
Sbjct:   60 RIRANTVYFQTNYTIVVLFSVFLSLIWNPFSLLVLLALLGAWLFLYFLR--DEPLTVFDREIDHRIVLIIMSVITLSILFLTDAKLNIAVAIVAGALAVLSHAAVRKTEDLFQTDEETS 176          
BLAST of DN621099 vs. ExPASy Swiss-Prot
Match: PR1F3_ARATH (PRA1 family protein F3 OS=Arabidopsis thaliana GN=PRA1F3 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.252e-17
Identity = 50/131 (38.17%), Postives = 74/131 (56.49%), Query Frame = -2
Query:  315 SEATLRIRKNYSYFRVNYLTXXXXXXAFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAHGAFRVPEDLFLDEQEPSASTGFLS 707
            S+A  RI+ N +YFR+NY         FSLI +P SL++   L+  WIFLY  R  D+P+ +F     +R  L VL VL++ +  LT+    ++ A++ GA L+  H   R  EDLFLDE+  +  T  L+
Sbjct:   55 SDAFTRIKTNLAYFRMNYAIVVLIVIFFSLIWHPTSLIVFTVLVVVWIFLYFLR--DEPIKLFRFQIDDRTVLIVLSVLTVVLLLLTNATFNIVGALVTGAVLVLIHSVVRKTEDLFLDEEAATTETSGLT 183          
BLAST of DN621099 vs. ExPASy Swiss-Prot
Match: PR1F4_ARATH (PRA1 family protein F4 OS=Arabidopsis thaliana GN=PRA1F4 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.758e-17
Identity = 51/131 (38.93%), Postives = 72/131 (54.96%), Query Frame = -2
Query:  315 SEATLRIRKNYSYFRVNYLTXXXXXXAFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAHGAFRVPEDLFLDEQEPSASTGFLS 707
            S+   RI+ N +YFR NY         FSLI +P SL++  GL+  WIFLY  R  D PL VF     +R  L  L V++I +  LT+    +++A+M GA L+  H   R  +DLFLDE+  +  T  L+
Sbjct:   55 SDVFSRIKTNLAYFRSNYAIVILNVIFFSLIWHPTSLIVFTGLVFLWIFLYFLR--DVPLKVFRFQIDDRAVLIGLSVITIVLLLLTNATFNIVAALMAGAVLVLIHAVIRKTDDLFLDEEAATTETSGLT 183          
BLAST of DN621099 vs. ExPASy Swiss-Prot
Match: PR1F2_ARATH (PRA1 family protein F2 OS=Arabidopsis thaliana GN=PRA1F2 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.384e-16
Identity = 50/135 (37.04%), Postives = 76/135 (56.30%), Query Frame = -2
Query:  312 FSEATLRIRKNYSYFRVNYLTXXXXXXAFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAHGAFRVPEDLFLDEQEPSA--STGFLSF 710
            F +A  RI+ N  YFR NY          SL+ +P SL++L  L+  WIFLY  R  D+PLVVFG    +R  L  L VL++ +  LT   S ++ +++  A L+  H A R  ++LFLDE+  +   ++G +S+
Sbjct:   54 FFDAISRIKTNLGYFRANYAIGVLFILFLSLLYHPTSLIVLSILVVFWIFLYFLR--DEPLVVFGYQIDDRTVLIGLSVLTVVMLLLTHATSNILGSLLTAAVLVLIHAAVRRSDNLFLDEEAAAVTEASGLMSY 186          
The following BLAST results are available for this feature:
BLAST of DN621099 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
PR1B4_ARATH7.028e-5372.46PRA1 family protein B4 OS=Arabidopsis thaliana GN=... [more]
PR1B3_ARATH3.735e-4665.94PRA1 family protein B3 OS=Arabidopsis thaliana GN=... [more]
PR1B1_ARATH4.566e-4463.04PRA1 family protein B1 OS=Arabidopsis thaliana GN=... [more]
PR1B5_ARATH2.960e-4364.23PRA1 family protein B5 OS=Arabidopsis thaliana GN=... [more]
PR1B2_ARATH6.171e-4160.58PRA1 family protein B2 OS=Arabidopsis thaliana GN=... [more]
PR1B6_ARATH2.427e-3757.46PRA1 family protein B6 OS=Arabidopsis thaliana GN=... [more]
PR1F1_ARATH7.341e-1841.18PRA1 family protein F1 OS=Arabidopsis thaliana GN=... [more]
PR1F3_ARATH1.252e-1738.17PRA1 family protein F3 OS=Arabidopsis thaliana GN=... [more]
PR1F4_ARATH4.758e-1738.93PRA1 family protein F4 OS=Arabidopsis thaliana GN=... [more]
PR1F2_ARATH1.384e-1637.04PRA1 family protein F2 OS=Arabidopsis thaliana GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06D23_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006D23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621099 ID=DN621099; Name=DN621099; organism=Citrus sinensis; type=EST; length=717bp
TTTTTTGAGATAAATCTCTCTTCATATATCATCAACTATTGTATAAAGAA
AACACGATATTACAATATGTATCATGTTAATTGCACTTTTAACAAAAAGA
AATTAATAGATCCATACAAGTTTCATTGATATCCACGAAGTATATTTCCA
AAAATGTCCAAATTGAAATTTATTTCGGCTTTCAACAGCCCCCCCCAAAA
AAAAACAAAAAACTAGAAATCATTCAATTAGCAAATCAAACCGCTACCTC
AAACGCGTGCGGAAACGGCCGGTGCAGCGGTGGCGGCGGCATTCGAGGCG
GCGCCACCGATGAAGGACAAGAATCCGGTGCTGGCAGAAGGCTCTTGTTC
GTCCAAGAACAGATCTTCAGGAACCCTAAACGCACCGTGAGCACAAATCA
GACCAGCCCCCACCATCACAGCCGAGATCAAGATCGATCCGACACTGGTG
AGGAAAAAGACGAAGATGCTCAAAACGATCAAGACACCAAGCGTCTCGCG
CTCGCTGAACGTGCGGCCGAATACGACGAGCGGCTGATCGGAGGGGCGGA
AGAGGTAGAGGAAGATCCAGGAGGCAAGGAGTCCGACGAGCATGAGGAGA
GAGAAAGGATTGGTGATGAGAGAGAAAGCAACGACGACAGCGACGACCGT
GAGGTAATTGACTCGGAAATAGGAGTAGTTCTTGCGGATGCGGAGGGTGG
CTTCGGAGAACGACTCC
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