DN621090

Overview
NameDN621090
Unique NameDN621090
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length620
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig642 contig Csv1_Contig642:15..634. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSI (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. indica GN=ADHIII PE=3 SV=1)

HSP 1 Score: 291.582 bits (745), Expect = 2.166e-78
Identity = 136/146 (93.15%), Postives = 139/146 (95.21%), Query Frame = 2
Query:  182 AMSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            A ST+GQVITCKAAVAWE NK + IEDVQVAPPQAGEVR+KILFTALCHTD YTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVR ATG GVMMNDRKSRFSINGKPIYHFMG
Sbjct:    2 ASSTQGQVITCKAAVAWEANKPMTIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATGVGVMMNDRKSRFSINGKPIYHFMG 147          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADHX_ARATH (Alcohol dehydrogenase class-3 OS=Arabidopsis thaliana GN=ADH2 PE=1 SV=2)

HSP 1 Score: 290.812 bits (743), Expect = 3.695e-78
Identity = 135/145 (93.10%), Postives = 141/145 (97.24%), Query Frame = 2
Query:  185 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            M+T+GQVITCKAAVA+EPNK LVIEDVQVAPPQAGEVRIKIL+TALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQ GDHVIPCYQAECRECKFCKSGKTNLCGKVR ATG G+MMNDRKSRFS+NGKPIYHFMG
Sbjct:    1 MATQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMG 145          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSJ (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. japonica GN=Os02g0815500 PE=2 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 4.826e-78
Identity = 135/146 (92.47%), Postives = 139/146 (95.21%), Query Frame = 2
Query:  182 AMSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            A ST+GQVITCKAAVAWE N+ + IEDVQVAPPQAGEVR+KILFTALCHTD YTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVR ATG GVMMNDRKSRFSINGKPIYHFMG
Sbjct:    2 ASSTQGQVITCKAAVAWEANRPMTIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATGVGVMMNDRKSRFSINGKPIYHFMG 147          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADHX_MAIZE (Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH PE=2 SV=1)

HSP 1 Score: 286.574 bits (732), Expect = 6.968e-77
Identity = 133/146 (91.10%), Postives = 139/146 (95.21%), Query Frame = 2
Query:  182 AMSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            A  T+GQVITCKAAVA+EPNK LVIEDVQVAPPQAGEVR+KILFTALCHTD YTWSGKDPEGLFPCILGHEAAGIVESVGEGVT+VQPGDHVIPCYQAEC+ECKFCKSGKTNLCGKVR ATG GVMMND KSRFS+NGKPIYHFMG
Sbjct:    2 ASPTQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTDVQPGDHVIPCYQAECKECKFCKSGKTNLCGKVRSATGVGVMMNDMKSRFSVNGKPIYHFMG 147          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADHX_PEA (Alcohol dehydrogenase class-3 OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 9.746e-71
Identity = 125/144 (86.81%), Postives = 132/144 (91.67%), Query Frame = 2
Query:  188 STEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            +T+GQVITCKAAVAWEPNK L IEDV+VAPPQA EVRI+ILFTALCHTDAYT  GKDPEGLFPCILGHEAAGIVESVGEGVT+V+PGDHVIP YQAEC ECKFCKS KTNLCGKVR ATG GVMM DRKSRFS+ GKPIYHFMG
Sbjct:    1 ATQGQVITCKAAVAWEPNKPLTIEDVEVAPPQANEVRIQILFTALCHTDAYTLGGKDPEGLFPCILGHEAAGIVESVGEGVTDVKPGDHVIPSYQAECGECKFCKSPKTNLCGKVRAATGVGVMMADRKSRFSVKGKPIYHFMG 144          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADHX_DICDI (Alcohol dehydrogenase class-3 OS=Dictyostelium discoideum GN=adh5 PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 2.849e-54
Identity = 100/145 (68.97%), Postives = 112/145 (77.24%), Query Frame = 2
Query:  185 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            MSTEG+VITCKAAVAWE  K LVIED++V PPQ GEVRIKIL+T +CHTD+YT SG DPEG+FPCILGHE  GIVES+GEGVT V+ GDHVIP Y  EC  CKFC S KTNLC K+R   G G  M D  +RF   GK I+HFMG
Sbjct:    1 MSTEGKVITCKAAVAWEAKKPLVIEDIEVQPPQKGEVRIKILYTGVCHTDSYTLSGSDPEGIFPCILGHEGGGIVESIGEGVTSVKVGDHVIPLYIPECGTCKFCTSNKTNLCSKIRITQGKG-QMPDGTTRFKCKGKEIFHFMG 144          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADH1_ORYSJ (Alcohol dehydrogenase 1 OS=Oryza sativa subsp. japonica GN=ADH1 PE=2 SV=2)

HSP 1 Score: 203.756 bits (517), Expect = 5.940e-52
Identity = 95/145 (65.52%), Postives = 113/145 (77.93%), Query Frame = 2
Query:  185 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            M+T G+VI CKAAVAWE  K LVIE+V+VAPPQA EVR+KILFT+LCHTD Y W  K    +FP I GHEA GIVESVGEGVT++ PGDHV+P +  EC+EC  CKS ++N+C  +R  T  GVM+ D KSRFSINGKPIYHF+G
Sbjct:    1 MATAGKVIKCKAAVAWEAAKPLVIEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQTPVFPRIFGHEAGGIVESVGEGVTDLAPGDHVLPVFTGECKECAHCKSAESNMCDLLRINTDRGVMIGDGKSRFSINGKPIYHFVG 145          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADH1_ORYSI (Alcohol dehydrogenase 1 OS=Oryza sativa subsp. indica GN=ADH1 PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 5.940e-52
Identity = 95/145 (65.52%), Postives = 113/145 (77.93%), Query Frame = 2
Query:  185 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            M+T G+VI CKAAVAWE  K LVIE+V+VAPPQA EVR+KILFT+LCHTD Y W  K    +FP I GHEA GIVESVGEGVT++ PGDHV+P +  EC+EC  CKS ++N+C  +R  T  GVM+ D KSRFSINGKPIYHF+G
Sbjct:    1 MATAGKVIKCKAAVAWEAAKPLVIEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQTPVFPRIFGHEAGGIVESVGEGVTDLAPGDHVLPVFTGECKECAHCKSAESNMCDLLRINTDRGVMIGDGKSRFSINGKPIYHFVG 145          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADHX_DROME (Alcohol dehydrogenase class-3 OS=Drosophila melanogaster GN=Fdh PE=1 SV=3)

HSP 1 Score: 202.601 bits (514), Expect = 1.323e-51
Identity = 98/144 (68.06%), Postives = 113/144 (78.47%), Query Frame = 2
Query:  188 STEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            +TEG+VITCKAAVAWE  K LVIED++VAPP+A EVRIKI  T +CHTDA+T SG DPEGLFP +LGHE AGIVESVGEGVT  + GDHVI  Y  +C ECKFCKSGKTNLC K+R   GAGV M +  SR S  G+ ++HFMG
Sbjct:    3 ATEGKVITCKAAVAWEAKKPLVIEDIEVAPPKAHEVRIKITATGVCHTDAFTLSGADPEGLFPVVLGHEGAGIVESVGEGVTNFKAGDHVIALYIPQCNECKFCKSGKTNLCQKIRLTQGAGV-MPEGTSRLSCKGQQLFHFMG 145          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADH2_SOLTU (Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=ADH2 PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.323e-51
Identity = 94/144 (65.28%), Postives = 113/144 (78.47%), Query Frame = 2
Query:  188 STEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            +T GQVI CKAAVAWE  K LV+E+V VAPPQ  EVR+KIL+T+LCHTD Y W  K    +FP ILGHEAAGIVESVGEGVTE+ PGDHV+P +  EC++C  CKS ++N+C  +R  T  GVM+ND +SRFSINGKPIYHF+G
Sbjct:    3 TTTGQVIRCKAAVAWEAGKPLVMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAKGQNPVFPRILGHEAAGIVESVGEGVTELAPGDHVLPVFTGECKDCAHCKSEESNMCSLLRINTDRGVMINDGQSRFSINGKPIYHFVG 146          
The following BLAST results are available for this feature:
BLAST of DN621090 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 138
Match NameE-valueIdentityDescription
ADHX_ORYSI2.166e-7893.15Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_ARATH3.695e-7893.10Alcohol dehydrogenase class-3 OS=Arabidopsis thali... [more]
ADHX_ORYSJ4.826e-7892.47Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_MAIZE6.968e-7791.10Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH P... [more]
ADHX_PEA9.746e-7186.81Alcohol dehydrogenase class-3 OS=Pisum sativum PE=... [more]
ADHX_DICDI2.849e-5468.97Alcohol dehydrogenase class-3 OS=Dictyostelium dis... [more]
ADH1_ORYSJ5.940e-5265.52Alcohol dehydrogenase 1 OS=Oryza sativa subsp. jap... [more]
ADH1_ORYSI5.940e-5265.52Alcohol dehydrogenase 1 OS=Oryza sativa subsp. ind... [more]
ADHX_DROME1.323e-5168.06Alcohol dehydrogenase class-3 OS=Drosophila melano... [more]
ADH2_SOLTU1.323e-5165.28Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=AD... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_06D18_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006D18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621090 ID=DN621090; Name=DN621090; organism=Citrus sinensis; type=EST; length=620bp
TTTTTTTTTTTGGTGTGTTTGGTAGAATCAATAATAGAGGGAGCTACTTT
AGAAAAATCTCACCTCTGTTGCCGGCAGCCACTCTCAGATCGTGTCACGT
CCCTTTTGAATAATAATATCTATCTGCATCTACTCGTTTCTTTTTGTGGT
CTGTTTTTCATTCTCATTTTCATTGTCAGCAGCCATGTCTACTGAAGGTC
AAGTCATCACATGCAAAGCGGCGGTGGCCTGGGAACCCAACAAGGCATTG
GTGATTGAGGATGTGCAGGTTGCTCCGCCTCAGGCTGGCGAGGTCCGAAT
CAAGATTCTCTTCACTGCTCTCTGCCACACTGATGCTTACACCTGGAGCG
GCAAGGATCCTGAAGGTCTCTTCCCCTGTATCCTAGGTCATGAGGCTGCT
GGGATTGTGGAGAGTGTTGGTGAAGGTGTGACCGAGGTTCAACCAGGTGA
TCATGTCATCCCTTGTTACCAGGCAGAATGCCGAGAGTGCAAGTTTTGCA
AGTCTGGAAAGACTAACCTCTGTGGTAAGGTTAGGGGTGCCACTGGTGCT
GGTGTCATGATGAATGACCGCAAGAGCCGTTTCTCGATAAATGGAAAGCC
TATCTATCACTTCATGGGAA
back to top