FC922054

Overview
NameFC922054
Unique NameFC922054
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: ISAM1_ARATH (Iron-sulfur assembly protein IscA-like 1, mitochondrial OS=Arabidopsis thaliana GN=At2g16710 PE=2 SV=2)

HSP 1 Score: 216.468 bits (550), Expect = 1.233e-55
Identity = 101/124 (81.45%), Postives = 116/124 (93.55%), Query Frame = 3
Query:   72 ASFLAQAAEKIGPAVRRQAVTLTDSAASRVRHLLQQRQRPYLKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESFMTT 443
            +  LA AA ++GPA+R+Q +TLTD AASRV HLLQQRQ+P+L+LGVKARGCNGLSYTLNYADE+ KFDELVE+KGV+IL++PKALMHVIGTKMDFVDDKLRSEFVFINPNS+GQCGCGESFMTT
Sbjct:    4 SQILAAAAARVGPALRKQVLTLTDEAASRVHHLLQQRQKPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEEKGVRILVEPKALMHVIGTKMDFVDDKLRSEFVFINPNSQGQCGCGESFMTT 127          
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: ISAM3_ARATH (Iron-sulfur assembly protein IscA-like 3, mitochondrial OS=Arabidopsis thaliana GN=At2g36260 PE=3 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 1.729e-41
Identity = 77/110 (70.00%), Postives = 99/110 (90.00%), Query Frame = 3
Query:  114 VRRQAVTLTDSAASRVRHLLQQRQRPYLKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESFMTT 443
            +R+Q + L+D+AA+R+R LLQ +Q+P+L+L V+A+GCNGLSY LNYA E+ KFDE+VE+KGVKIL+DPKA+MHVIGT+MDFVDDKLRSEFVF+NPN+  +CGCGESF TT
Sbjct:    1 MRKQVLALSDTAAARIRQLLQHQQKPFLRLAVEAKGCNGLSYVLNYAQEKGKFDEVVEEKGVKILVDPKAVMHVIGTEMDFVDDKLRSEFVFVNPNAT-KCGCGESFTTT 109          
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: ISA1_YEAST (Iron sulfur assembly protein 1 OS=Saccharomyces cerevisiae GN=ISA1 PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 8.329e-28
Identity = 58/107 (54.21%), Postives = 77/107 (71.96%), Query Frame = 3
Query:  117 RRQAVTLTDSAASRVRHLLQQRQRPYLKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESFM 437
            R+  +TL+  A   +R LL Q +   +++  + RGC+GL+Y L Y  E  KFDE+VE  GVKI+ID KAL  +IG++MD++DDKL S+FVF NPNSKG CGCGESFM
Sbjct:  143 RKALITLSPKAIKHLRALLAQPEPKLIRVSARNRGCSGLTYDLQYITEPGKFDEVVEQDGVKIVIDSKALFSIIGSEMDWIDDKLASKFVFKNPNSKGTCGCGESFM 249          
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: Y484_RICPR (Uncharacterized protein RP484 OS=Rickettsia prowazekii GN=RP484 PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.134e-27
Identity = 51/107 (47.66%), Postives = 83/107 (77.57%), Query Frame = 3
Query:  120 RQAVTLTDSAASRVRHLLQQRQRPY--LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 434
            +  ++LTD+AA +V+ L+++R +P   +++G+K+ GC G +Y + YAD + +FDE+VE+KGV+ILIDPK LM+++G++MD+V+   +S+F F NPN K  CGCG+SF
Sbjct:    2 KNVISLTDAAAKQVKLLIEKRAKPTFGIRVGIKSGGCAGQTYYVEYADNKNQFDEVVEEKGVRILIDPKTLMYILGSEMDYVETNFKSQFTFTNPNEKANCGCGKSF 108          
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: ISCA1_DICDI (Iron-sulfur cluster assembly 1 homolog, mitochondrial OS=Dictyostelium discoideum GN=isca1 PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.203e-26
Identity = 54/118 (45.76%), Postives = 86/118 (72.88%), Query Frame = 3
Query:   99 KIGPAVRRQAVTLTDSAASRVRHLLQQRQRPY---LKLGVKARGCNGLSYTLNYADERAKFDE-LVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESFMT 440
            K+G   ++   ++TDSA  RV+ ++  ++      L+LG+K RGC+G+SYTL++A ++ KFDE +V DK + I++D KAL+ VIGT+MD++++ ++ EF+FINPN+   CGCGESF T
Sbjct:    8 KLGKPSKKAIFSMTDSALKRVKEIMNDKKIDNCIGLRLGIKERGCSGMSYTLDFATQKNKFDETVVADKDINIIVDSKALLSVIGTEMDYIEEPIKKEFIFINPNATNTCGCGESFTT 125          
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: ISCA1_MACFA (Iron-sulfur cluster assembly 1 homolog, mitochondrial OS=Macaca fascicularis GN=ISCA1 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.969e-26
Identity = 60/122 (49.18%), Postives = 84/122 (68.85%), Query Frame = 3
Query:   72 ASFLAQAAEKIGPAVRRQAVTLTDSAASRVRHLLQQR-QRPYLKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 434
            A+  A +  K+ P   R A+TLT SA ++++ LL+ + +   +K+GV+ RGCNGLSYTL Y   +   DE V   GV++ I+ KA + ++GT+MD+V+DKL SEFVF NPN KG CGCGESF
Sbjct:    8 ATVRAVSKRKLQPT--RAALTLTPSAVNKIKQLLKDKPEHVGVKVGVRTRGCNGLSYTLEYTKTKGDSDEEVIQDGVRVFIEKKAQLTLLGTEMDYVEDKLSSEFVFNNPNIKGTCGCGESF 127          
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: ISCA1_HUMAN (Iron-sulfur cluster assembly 1 homolog, mitochondrial OS=Homo sapiens GN=ISCA1 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.969e-26
Identity = 60/122 (49.18%), Postives = 84/122 (68.85%), Query Frame = 3
Query:   72 ASFLAQAAEKIGPAVRRQAVTLTDSAASRVRHLLQQR-QRPYLKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 434
            A+  A +  K+ P   R A+TLT SA ++++ LL+ + +   +K+GV+ RGCNGLSYTL Y   +   DE V   GV++ I+ KA + ++GT+MD+V+DKL SEFVF NPN KG CGCGESF
Sbjct:    8 ATVRAVSKRKLQPT--RAALTLTPSAVNKIKQLLKDKPEHVGVKVGVRTRGCNGLSYTLEYTKTKGDSDEEVIQDGVRVFIEKKAQLTLLGTEMDYVEDKLSSEFVFNNPNIKGTCGCGESF 127          
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: ISCA1_CHICK (Iron-sulfur cluster assembly 1 homolog, mitochondrial OS=Gallus gallus GN=ISCA1 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.969e-26
Identity = 60/124 (48.39%), Postives = 81/124 (65.32%), Query Frame = 3
Query:   66 SMASFLAQAAEKIGPAVRRQAVTLTDSAASRVRHLLQ-QRQRPYLKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 434
            S+     +A  K      R A+TLT SA  +++ LL+ Q +   +K+GV+ RGCNGLSYTL Y   +   DE V   GV++ I+ KA + ++GT+MD+V+DKL SEFVF NPN KG CGCGESF
Sbjct:    4 SVVRATVRAVSKRKIQATRAALTLTPSAVQKIKQLLKDQPEHVGVKVGVRTRGCNGLSYTLEYTKSKGDSDEEVVQDGVRVFIEKKAQLTLLGTEMDYVEDKLSSEFVFNNPNIKGTCGCGESF 127          
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: ISCA1_BOVIN (Iron-sulfur cluster assembly 1 homolog, mitochondrial OS=Bos taurus GN=ISCA1 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.969e-26
Identity = 60/122 (49.18%), Postives = 84/122 (68.85%), Query Frame = 3
Query:   72 ASFLAQAAEKIGPAVRRQAVTLTDSAASRVRHLLQQR-QRPYLKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 434
            A+  A +  K+ P   R A+TLT SA ++++ LL+ + +   +K+GV+ RGCNGLSYTL Y   +   DE V   GV++ I+ KA + ++GT+MD+V+DKL SEFVF NPN KG CGCGESF
Sbjct:    8 ATVRAVSKRKLQPT--RAALTLTPSAVNKIKQLLKDKPEHVGVKVGVRTRGCNGLSYTLEYTKTKGDSDEEVIQDGVRVFIEKKAQLTLLGTEMDYVEDKLSSEFVFNNPNIKGTCGCGESF 127          
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: ISCA1_RAT (Iron-sulfur cluster assembly 1 homolog, mitochondrial OS=Rattus norvegicus GN=Isca1 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.796e-26
Identity = 60/122 (49.18%), Postives = 84/122 (68.85%), Query Frame = 3
Query:   72 ASFLAQAAEKIGPAVRRQAVTLTDSAASRVRHLLQQR-QRPYLKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 434
            A+  A +  K+ P   R A+TLT SA ++++ LL+ + +   LK+GV+ RGCNGLSY+L Y   +   DE V   GV++ I+ KA + ++GT+MD+V+DKL SEFVF NPN KG CGCGESF
Sbjct:    8 ATVRAVSKRKLQPT--RAALTLTPSAVNKIKQLLKDKPEHVGLKVGVRTRGCNGLSYSLEYTKTKGDADEEVIQDGVRVFIEKKAQLTLLGTEMDYVEDKLSSEFVFNNPNIKGTCGCGESF 127          
The following BLAST results are available for this feature:
BLAST of FC922054 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 330
Match NameE-valueIdentityDescription
ISAM1_ARATH1.233e-5581.45Iron-sulfur assembly protein IscA-like 1, mitochon... [more]
ISAM3_ARATH1.729e-4170.00Iron-sulfur assembly protein IscA-like 3, mitochon... [more]
ISA1_YEAST8.329e-2854.21Iron sulfur assembly protein 1 OS=Saccharomyces ce... [more]
Y484_RICPR4.134e-2747.66Uncharacterized protein RP484 OS=Rickettsia prowaz... [more]
ISCA1_DICDI1.203e-2645.76Iron-sulfur cluster assembly 1 homolog, mitochondr... [more]
ISCA1_MACFA5.969e-2649.18Iron-sulfur cluster assembly 1 homolog, mitochondr... [more]
ISCA1_HUMAN5.969e-2649.18Iron-sulfur cluster assembly 1 homolog, mitochondr... [more]
ISCA1_CHICK5.969e-2648.39Iron-sulfur cluster assembly 1 homolog, mitochondr... [more]
ISCA1_BOVIN5.969e-2649.18Iron-sulfur cluster assembly 1 homolog, mitochondr... [more]
ISCA1_RAT7.796e-2649.18Iron-sulfur cluster assembly 1 homolog, mitochondr... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1DA06RM1 SLH Citrus sinensis cDNA clone KN0AAM1DA06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC922054 ID=FC922054; Name=FC922054; organism=Citrus sinensis; type=EST; length=740bp
AATTTTCTTTTTTTGAAAAAAAAGGAAATTAAATAGAAAAAGATTGCGTG
ACATTTTGGATATGATCGATGGCTTCGTTTCTGGCGCAAGCCGCTGAGAA
AATCGGACCGGCCGTTAGGCGGCAGGCCGTGACGTTAACAGACTCCGCCG
CATCTAGAGTACGTCACCTCCTCCAGCAACGCCAGCGACCTTACCTCAAG
CTCGGCGTCAAGGCCCGTGGCTGCAACGGCTTGTCCTACACCCTCAATTA
CGCCGATGAGAGAGCTAAGTTTGATGAGTTGGTTGAGGATAAGGGTGTGA
AGATACTGATTGATCCAAAAGCTCTCATGCACGTTATTGGGACCAAAATG
GATTTTGTAGATGATAAGCTCAGGTCTGAGTTTGTATTCATTAATCCAAA
CTCTAAAGGGCAGTGTGGTTGTGGTGAATCCTTTATGACAACCAGCAGTA
GTGGAGCGTCTAAGCAGGGTGGAAGCTAGGGATTCTTACAAACTAATAGT
ACATGAAGAATGAACGTAGATGATTCTTTTCCCTGGCTGGCCAAGCATTA
CGCACTTGTCTGAAGGTTGTGAATGAAAGGTAGACATCCTCGGTGAGCTT
TAATGGCAGTTGGAGCAACAGGGGCTTTACTAATTCACGTCCTGGGAATC
ATTGCTGTTTTGCCGTCTACAAACAAATTTGTAAAACTATTGTAGCATTT
TTTTTCCTGGTTTTGACAAAAATACCTTTGTAACCTGATT
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