DN621050
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN621050 vs. ExPASy Swiss-Prot
Match: GGPP1_ARATH (Geranylgeranyl pyrophosphate synthetase 1, chloroplastic OS=Arabidopsis thaliana GN=GGPS1 PE=2 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 4.034e-21 Identity = 47/72 (65.28%), Postives = 60/72 (83.33%), Query Frame = 3 Query: 225 YMTS*SKKVHKALDEALPMQHPEKIHDAMRYSLLAGGKRIRHVLCIASCELVRGDESLMMPMACALEMTHTM 440 Y+ + ++ V+KALD A+P++ P KIH+AMRYSLLAGGKR+R VLCIA+CELV G+ES MP ACA+EM HTM Sbjct: 79 YIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESTAMPAACAVEMIHTM 150
BLAST of DN621050 vs. ExPASy Swiss-Prot
Match: GGPPS_SINAL (Geranylgeranyl pyrophosphate synthetase, chloroplastic/chromoplastic OS=Sinapis alba GN=GGPS1 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 6.882e-21 Identity = 47/72 (65.28%), Postives = 58/72 (80.56%), Query Frame = 3 Query: 225 YMTS*SKKVHKALDEALPMQHPEKIHDAMRYSLLAGGKRIRHVLCIASCELVRGDESLMMPMACALEMTHTM 440 Y+ + V+KALD A+P++ P KIH+AMRYSLLAGGKR+R VLCIA+CELV G+ESL MP CA+EM HTM Sbjct: 75 YIIRKADSVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESLAMPARCAVEMIHTM 146
BLAST of DN621050 vs. ExPASy Swiss-Prot
Match: GGPP2_ARATH (Geranylgeranyl pyrophosphate synthetase 2 OS=Arabidopsis thaliana GN=GGPP2 PE=2 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 3.415e-20 Identity = 44/74 (59.46%), Postives = 59/74 (79.73%), Query Frame = 3 Query: 219 EEYMTS*SKKVHKALDEALPMQHPEKIHDAMRYSLLAGGKRIRHVLCIASCELVRGDESLMMPMACALEMTHTM 440 + YM S ++ V+KAL+EA+P+ P KIH+AMRY++LA GKR+R +LC+ASCELV G E+ MP ACA+EM HTM Sbjct: 86 DPYMMSKAESVNKALEEAIPVGEPLKIHEAMRYAILAAGKRVRPILCLASCELVGGQENAAMPAACAVEMIHTM 159
BLAST of DN621050 vs. ExPASy Swiss-Prot
Match: GGPPS_HEVBR (Geranylgeranyl pyrophosphate synthetase, chloroplastic OS=Hevea brasiliensis GN=GGPS PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 4.461e-20 Identity = 42/74 (56.76%), Postives = 58/74 (78.38%), Query Frame = 3 Query: 219 EEYMTS*SKKVHKALDEALPMQHPEKIHDAMRYSLLAGGKRIRHVLCIASCELVRGDESLMMPMACALEMTHTM 440 + YM +++AL+ A+P+Q P KIH++MRYSLLAGGKR+R LC+A+CELV G++S+ MP ACA+EM HTM Sbjct: 80 KSYMLQKGNSINQALEAAIPLQEPAKIHESMRYSLLAGGKRVRPALCLAACELVGGNDSMAMPAACAVEMIHTM 153
BLAST of DN621050 vs. ExPASy Swiss-Prot
Match: GGPPS_CATRO (Geranylgeranyl pyrophosphate synthetase, chloroplastic OS=Catharanthus roseus GN=GGPS1 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.099e-18 Identity = 43/72 (59.72%), Postives = 57/72 (79.17%), Query Frame = 3 Query: 225 YMTS*SKKVHKALDEALPMQHPEKIHDAMRYSLLAGGKRIRHVLCIASCELVRGDESLMMPMACALEMTHTM 440 YM + V+KAL++A+ ++ P KIH++MRYSLLAGGKR+R +LCIA+CEL G ES+ MP ACA+EM HTM Sbjct: 69 YMIGKANSVNKALEDAVLVREPLKIHESMRYSLLAGGKRVRPMLCIAACELFGGTESVAMPSACAVEMIHTM 140
BLAST of DN621050 vs. ExPASy Swiss-Prot
Match: GGPP4_ARATH (Geranylgeranyl pyrophosphate synthetase 4 OS=Arabidopsis thaliana GN=GGPP4 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.435e-18 Identity = 41/72 (56.94%), Postives = 57/72 (79.17%), Query Frame = 3 Query: 225 YMTS*SKKVHKALDEALPMQHPEKIHDAMRYSLLAGGKRIRHVLCIASCELVRGDESLMMPMACALEMTHTM 440 YM S ++ +++ALDEA+P+ P IH AMRY++LAGGKR+R +LC+A+CELV G+E L + ACA+EM HTM Sbjct: 84 YMISKAETINRALDEAIPLIEPLNIHKAMRYAILAGGKRVRPILCLAACELVGGEERLAIQAACAVEMIHTM 155
BLAST of DN621050 vs. ExPASy Swiss-Prot
Match: GGPPS_CAPAN (Geranylgeranyl pyrophosphate synthetase, chloroplastic OS=Capsicum annuum GN=GGPS1 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 9.301e-18 Identity = 42/72 (58.33%), Postives = 56/72 (77.78%), Query Frame = 3 Query: 225 YMTS*SKKVHKALDEALPMQHPEKIHDAMRYSLLAGGKRIRHVLCIASCELVRGDESLMMPMACALEMTHTM 440 Y+T + V+KALDEA+ ++ P IH+AMRYSLLAGGKR+R +LC+A+CELV G++ M ACA+EM HTM Sbjct: 81 YVTEKAISVNKALDEAIIVKEPHVIHEAMRYSLLAGGKRVRPMLCLAACELVGGNQENAMAAACAVEMIHTM 152
BLAST of DN621050 vs. ExPASy Swiss-Prot
Match: GGPP3_ARATH (Geranylgeranyl pyrophosphate synthetase 3, chloroplastic OS=Arabidopsis thaliana GN=GGPP3 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 5.104e-16 Identity = 39/71 (54.93%), Postives = 53/71 (74.65%), Query Frame = 3 Query: 225 YMTS*SKKVHKALDEALPMQHPEKIHDAMRYSLLAGGKRIRHVLCIASCELVRGDESLMMPMACALEMTHT 437 YM ++ V+ ALD ++P++ P + +A+RYSLLAGGKR+R +LCIA CELV GDE+ M ACA+EM HT Sbjct: 69 YMIRKAESVNAALDVSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHT 139
BLAST of DN621050 vs. ExPASy Swiss-Prot
Match: GGPP6_ARATH (Geranylgeranyl pyrophosphate synthetase 6, mitochondrial OS=Arabidopsis thaliana GN=GGPP6 PE=2 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 2.144e-14 Identity = 38/83 (45.78%), Postives = 54/83 (65.06%), Query Frame = 3 Query: 210 SSIEEYMTS*SKKVHKALDEALPM--------QHPEKIHDAMRYSLLAGGKRIRHVLCIASCELVRGDESLMMPMACALEMTH 434 S YM + +K ++KALD ++P+ + ++H AMRY+LL GGKR+R +LC+ +CELV G ES MP ACA+EM H Sbjct: 30 SEFISYMKNKAKSINKALDNSIPLCNNFVPLWEPVLEVHKAMRYTLLPGGKRVRPMLCLVACELVGGQESTAMPAACAVEMIH 112
BLAST of DN621050 vs. ExPASy Swiss-Prot
Match: CRTE_CYAPA (Geranylgeranyl pyrophosphate synthetase homolog OS=Cyanophora paradoxa GN=crtE PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.657e-14 Identity = 36/72 (50.00%), Postives = 50/72 (69.44%), Query Frame = 3 Query: 225 YMTS*SKKVHKALDEALPMQHPEKIHDAMRYSLLAGGKRIRHVLCIASCELVRGDESLMMPMACALEMTHTM 440 Y+ + V L++++P +P I+D++RYSL AGGKRIR +LC+ASCEL G + +P ACALEM HTM Sbjct: 13 YLYERKEIVEDTLNKSIPRGNPTFIYDSIRYSLSAGGKRIRPILCLASCELAGGTMEMALPTACALEMIHTM 84 The following BLAST results are available for this feature:
BLAST of DN621050 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >DN621050 ID=DN621050; Name=DN621050; organism=Citrus sinensis; type=EST; length=440bpback to top |