DN621041
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621041 vs. ExPASy Swiss-Prot
Match: AFB3_ARATH (Protein AUXIN SIGNALING F-BOX 3 OS=Arabidopsis thaliana GN=AFB3 PE=1 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.363e-56 Identity = 111/152 (73.03%), Postives = 126/152 (82.89%), Query Frame = -3 Query: 262 AIVQSCKXXXXXXXXXXLTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLRKLEIRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDD---QMEFSLDDRQKVGKMYLYRTLVGPRKDAPDFV 708 AIVQ+CK LTDQVFLYIGMYAEQLEMLSIAFAG++DKGMLYVLNGCKK+RKLEIRDSPFGN ALL DVG+YETMRSLWMSSCEVTLGGC+ LA+ PRLNVEIINE++ + D+R+KV K+YLYRT+VG RKDAP +V Sbjct: 423 AIVQACKGLRRLSVSGLLTDQVFLYIGMYAEQLEMLSIAFAGDTDKGMLYVLNGCKKMRKLEIRDSPFGNAALLADVGRYETMRSLWMSSCEVTLGGCKRLAQNSPRLNVEIINENENNGMEQNEEDEREKVDKLYLYRTVVGTRKDAPPYV 574
BLAST of DN621041 vs. ExPASy Swiss-Prot
Match: AFB2_ARATH (Protein AUXIN SIGNALING F-BOX 2 OS=Arabidopsis thaliana GN=AFB2 PE=1 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 1.968e-55 Identity = 111/155 (71.61%), Postives = 124/155 (80.00%), Query Frame = -3 Query: 253 AIVQSCKXXXXXXXXXXLTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLRKLEIRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDD---QMEFSLDDRQKVGKMYLYRTLVGPRKDAPDFVWTL 708 AIV++CK LTDQVFLYIGMYA QLEMLSIAFAG++DKGMLYVLNGCKK++KLEIRDSPFG+TALL DV KYETMRSLWMSSCEVTL GC+ LA+K P LNVEIINE+D E + RQKV K+YLYRT+VG R DAP FVW L Sbjct: 421 AIVKACKSLRRLSLSGLLTDQVFLYIGMYANQLEMLSIAFAGDTDKGMLYVLNGCKKMKKLEIRDSPFGDTALLADVSKYETMRSLWMSSCEVTLSGCKRLAEKAPWLNVEIINENDNNRMEENGHEGRQKVDKLYLYRTVVGTRMDAPPFVWIL 575
BLAST of DN621041 vs. ExPASy Swiss-Prot
Match: TIR1B_ORYSJ (Transport inhibitor response 1-like protein Os04g0395600 OS=Oryza sativa subsp. japonica GN=Os04g0395600 PE=2 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.046e-48 Identity = 99/152 (65.13%), Postives = 116/152 (76.32%), Query Frame = -3 Query: 262 AIVQSCKXXXXXXXXXXLTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLRKLEIRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDD---QMEFSLDDRQKVGKMYLYRTLVGPRKDAPDFV 708 AIV+ CK LTD+VF+YIG YA+QLEMLSIAFAG+SDKGM++V+NGCK LRKLEIRDSPFG+ ALL + +YETMRSLWMSSC VTL GCQ LA KMP LNVE+INE D +ME + D KV K+Y+YRT G R DAP+FV Sbjct: 421 AIVRECKGLQRLSISGLLTDKVFMYIGKYAKQLEMLSIAFAGDSDKGMMHVMNGCKNLRKLEIRDSPFGDAALLGNFARYETMRSLWMSSCNVTLKGCQVLASKMPMLNVEVINERDGSNEMEENHGDLPKVEKLYVYRTTAGARDDAPNFV 572
BLAST of DN621041 vs. ExPASy Swiss-Prot
Match: TIRC_ORYSJ (Transport inhibitor response 1-like protein Os11g0515500 OS=Oryza sativa subsp. japonica GN=Os11g0515500 PE=2 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.670e-46 Identity = 92/153 (60.13%), Postives = 116/153 (75.82%), Query Frame = -3 Query: 256 AIVQSCKXXXXXXXXXXLTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLRKLEIRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDDQME--FSLDDRQKVGKMYLYRTLVGPRKDAPDFVWT 708 AIVQSCK LTD VFLYIGMYAE+LEMLS+AFAG++D GM YVLNGCK L+KLEIRDSPFG++ALL + +YE MRSLW+SSC VTLGGC++LA M LN+E++N + + +D +KV K+Y+YRT+ GPR DAP+F+ T Sbjct: 415 AIVQSCKGLRRLCLSGLLTDTVFLYIGMYAERLEMLSVAFAGDTDDGMTYVLNGCKNLKKLEIRDSPFGDSALLAGMHQYEAMRSLWLSSCNVTLGGCKSLAASMANLNIEVMNRAASINEADNANDAKKVKKLYIYRTVAGPRGDAPEFIST 567
BLAST of DN621041 vs. ExPASy Swiss-Prot
Match: TIR1_ARATH (Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidopsis thaliana GN=TIR1 PE=1 SV=2) HSP 1 Score: 165.622 bits (418), Expect = 2.336e-40 Identity = 83/152 (54.61%), Postives = 108/152 (71.05%), Query Frame = -3 Query: 253 AIVQSCKXXXXXXXXXXLTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLRKLEIRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDDQMEFSLDDRQKVGKMYLYRTLVGPRKDAPDFVWTL 708 AIV+ CK LTD+VF YIG YA+++EMLS+AFAG+SD GM +VL+GC LRKLEIRD PFG+ ALL + K ETMRSLWMSSC V+ G C+ L +KMP+LNVE+I+E + S + V ++++YRT+ GPR D P FVW + Sbjct: 426 AIVEHCKDLRRLSLSGLLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGAPD-SRPESCPVERVFIYRTVAGPRFDMPGFVWNM 576
BLAST of DN621041 vs. ExPASy Swiss-Prot
Match: TIR1A_ORYSJ (Transport inhibitor response 1-like protein Os05g0150500 OS=Oryza sativa subsp. japonica GN=Os05g0150500 PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.674e-38 Identity = 83/144 (57.64%), Postives = 104/144 (72.22%), Query Frame = -3 Query: 283 AIVQSCKXXXXXXXXXXLTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLRKLEIRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDDQM--EFSLDDRQKVGKMYLYRTLVGPR 708 AIV+SC+ LTD VF IG +A++LEMLSIAFAGNSD G+ Y+L+GCK L+KLEIRD PFG+ LL + K ETMRSLWMSSC +TLG C+ LA+KMPRL+VEI+N+ + SL D V K+Y+YRT+ GPR Sbjct: 437 AIVESCRGLRRLSISGLLTDLVFKSIGAHADRLEMLSIAFAGNSDLGLHYILSGCKSLKKLEIRDCPFGDKPLLANAAKLETMRSLWMSSCLLTLGACRQLARKMPRLSVEIMNDPGRSCPLDSLPDETPVEKLYVYRTIAGPR 580
BLAST of DN621041 vs. ExPASy Swiss-Prot
Match: GRH1_ARATH (GRR1-like protein 1 OS=Arabidopsis thaliana GN=GRH1 PE=1 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.855e-38 Identity = 78/152 (51.32%), Postives = 107/152 (70.39%), Query Frame = -3 Query: 253 AIVQSCKXXXXXXXXXXLTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLRKLEIRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDDQMEFSLDDRQKVGKMYLYRTLVGPRKDAPDFVWTL 708 AI + C+ L+D+ F YIG +A+++ MLSIAFAG+SD + ++L+GC+ L+KLEIRD PFG+TALL K ETMRSLWMSSC V+ G C+ L++KMPRLNVE+I D+ S + V ++Y+YRT+ GPR D P+FVWT+ Sbjct: 422 AIAEGCRDLRRLSVSGLLSDKAFKYIGKHAKKVRMLSIAFAGDSDLMLHHLLSGCESLKKLEIRDCPFGDTALLEHAAKLETMRSLWMSSCFVSFGACKLLSQKMPRLNVEVI--DEHPPESRPESSPVERIYIYRTVAGPRMDTPEFVWTI 571
BLAST of DN621041 vs. ExPASy Swiss-Prot
Match: FBX14_ARATH (F-box protein FBX14 OS=Arabidopsis thaliana GN=FBX14 PE=1 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.612e-33 Identity = 71/152 (46.71%), Postives = 96/152 (63.16%), Query Frame = -3 Query: 253 AIVQSCKXXXXXXXXXXLTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLRKLEIRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDDQMEFSLDDRQKVGKMYLYRTLVGPRKDAPDFVWTL 708 AIV++CK LTD+ F YIG Y + + LS+AFAGNSDK + YVL GC KL+KLEIRDSPFG+ L + + +Y MR +W+SSC ++ GGC+ ++ +P + VE+ D + V +YLYR+L GPRKDAP FV L Sbjct: 472 AIVKNCKKLTRLAVSGLLTDEAFSYIGEYGKLIRTLSVAFAGNSDKALRYVLEGCPKLQKLEIRDSPFGDVGLRSGMHRYSNMRFVWLSSCLISRGGCRGVSHALPNVVVEVFGADGDDDEDTVTGDYVETLYLYRSLDGPRKDAPKFVTIL 623
BLAST of DN621041 vs. ExPASy Swiss-Prot
Match: TIR1L_ARATH (Transport inhibitor response 1-like protein OS=Arabidopsis thaliana GN=At5g49980 PE=1 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.161e-33 Identity = 72/152 (47.37%), Postives = 99/152 (65.13%), Query Frame = -3 Query: 253 AIVQSCKXXXXXXXXXXLTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLRKLEIRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDDQMEFSLDDRQKVGKMYLYRTLVGPRKDAPDFVWTL 708 AIV++CK LTDQ F Y+G Y + + LS+AFAG+SD + +VL GC +L+KLEIRDSPFG+ AL + + +Y MR +WMS+C ++ G C+ +A+ MP L VE+I DD D+R V +Y+YR+L GPR DAP FV L Sbjct: 472 AIVKNCKKLTRLAVSGLLTDQAFRYMGEYGKLVRTLSVAFAGDSDMALRHVLEGCPRLQKLEIRDSPFGDVALRSGMHRYYNMRFVWMSACSLSKGCCKDIARAMPNLVVEVIGSDDDD----DNRDYVETLYMYRSLDGPRNDAPKFVTIL 619 The following BLAST results are available for this feature:
BLAST of DN621041 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DN621041 ID=DN621041; Name=DN621041; organism=Citrus sinensis; type=EST; length=710bpback to top |