DN621037
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN621037 vs. ExPASy Swiss-Prot
Match: CSN5B_ARATH (COP9 signalosome complex subunit 5b OS=Arabidopsis thaliana GN=CSN5B PE=1 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 1.279e-32 Identity = 76/103 (73.79%), Postives = 84/103 (81.55%), Query Frame = -3 Query: 291 SFSPLLGNGEYVAGQILDLAEKLEQAENQLFHSRYGPLI-APPPRRKEEDSQLAKITRDSGKITVEQVHGLMSQVIKDILFNFVRQSPKTHAEPFDPEPMIES 596 S SPLLGNG+YVAGQI DLAEKLEQAE+QL +SRYG + A RRKE++ QLAKITRDS KITVEQVHGLMSQVIKDILFN RQS K+ + DPEPMI S Sbjct: 255 SSSPLLGNGDYVAGQISDLAEKLEQAESQLANSRYGGIAPAGHQRRKEDEPQLAKITRDSAKITVEQVHGLMSQVIKDILFNSARQSKKSADDSSDPEPMITS 357
BLAST of DN621037 vs. ExPASy Swiss-Prot
Match: CSN5A_ARATH (COP9 signalosome complex subunit 5a OS=Arabidopsis thaliana GN=CSN5A PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 3.259e-28 Identity = 69/102 (67.65%), Postives = 80/102 (78.43%), Query Frame = -3 Query: 297 SFSPLLGNGEYVAGQILDLAEKLEQAENQLFHSRYGPLIAPPPRRKEED-SQLAKITRDSGKITVEQVHGLMSQVIKDILFNFVRQS-PKTHAEPFDPEPMI 596 S SPLLGNG+YVAGQI DLAEKLEQAE+ L SR+G ++ +K+ED SQL KITRDS KITVEQVHGLMSQVIKD LFN +RQS K+ + DP+PMI Sbjct: 255 SSSPLLGNGDYVAGQISDLAEKLEQAESHLVQSRFGGVVPSSLHKKKEDESQLTKITRDSAKITVEQVHGLMSQVIKDELFNSMRQSNNKSPTDSSDPDPMI 356
BLAST of DN621037 vs. ExPASy Swiss-Prot
Match: CSN5_DICDI (COP9 signalosome complex subunit 5 OS=Dictyostelium discoideum GN=csn5 PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.862e-16 Identity = 43/81 (53.09%), Postives = 59/81 (72.84%), Query Frame = -3 Query: 354 SFSPLLGNGEYVAGQILDLAEKLEQAENQLFHSRYGPLIAPPPRRKEEDSQLAKITRDSGKITVEQVHGLMSQVIKDILFN 596 S SP+ N +Y+ GQI DL+EKLEQAE QL HSR L +K+E+S L+K+++DS K+T+EQV G+MSQV K+ +FN Sbjct: 250 SSSPIFSNRDYITGQINDLSEKLEQAETQLSHSRSSIL-----DKKKEESLLSKVSKDSSKVTIEQVQGIMSQVFKNSIFN 325
BLAST of DN621037 vs. ExPASy Swiss-Prot
Match: CSN5_DANRE (COP9 signalosome complex subunit 5 OS=Danio rerio GN=cops5 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 9.206e-15 Identity = 44/86 (51.16%), Postives = 56/86 (65.12%), Query Frame = -3 Query: 339 SFSPLLGNGEYVAGQILDLAEKLEQAENQLFHSRYGPLIAPPPRRKEEDSQLAKITRDSGKITVEQVHGLMSQVIKDILFNFVRQS 596 S S LL N +Y GQ+ DL+EKLEQAE QL + ++ ++ + +LAK TRDS K T+E +HGLMSQVIKD LFN V S Sbjct: 249 SSSSLLTNADYTTGQVFDLSEKLEQAEAQLGRGSF--MLGLDTHDRKSEDKLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQVNTS 332
BLAST of DN621037 vs. ExPASy Swiss-Prot
Match: CSN5_XENLA (COP9 signalosome complex subunit 5 OS=Xenopus laevis GN=cops5 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.678e-14 Identity = 42/81 (51.85%), Postives = 54/81 (66.67%), Query Frame = -3 Query: 354 SFSPLLGNGEYVAGQILDLAEKLEQAENQLFHSRYGPLIAPPPRRKEEDSQLAKITRDSGKITVEQVHGLMSQVIKDILFN 596 S S LL N EY GQ+ DL+EKLEQ+E QL + ++ ++ + +LAK TRDS K T+E +HGLMSQVIKD LFN Sbjct: 249 SSSSLLTNAEYTTGQVFDLSEKLEQSEAQLGRGSF--MLGLESHDRKSEDKLAKATRDSCKTTIEAIHGLMSQVIKDKLFN 327
BLAST of DN621037 vs. ExPASy Swiss-Prot
Match: CSN5_HUMAN (COP9 signalosome complex subunit 5 OS=Homo sapiens GN=COPS5 PE=1 SV=4) HSP 1 Score: 77.7962 bits (190), Expect = 4.569e-14 Identity = 42/86 (48.84%), Postives = 56/86 (65.12%), Query Frame = -3 Query: 339 SFSPLLGNGEYVAGQILDLAEKLEQAENQLFHSRYGPLIAPPPRRKEEDSQLAKITRDSGKITVEQVHGLMSQVIKDILFNFVRQS 596 S S LL N +Y GQ+ DL+EKLEQ+E QL + ++ ++ + +LAK TRDS K T+E +HGLMSQVIKD LFN + S Sbjct: 251 SSSSLLTNADYTTGQVFDLSEKLEQSEAQLGRGSF--MLGLETHDRKSEDKLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQINIS 334
BLAST of DN621037 vs. ExPASy Swiss-Prot
Match: CSN5_XENTR (COP9 signalosome complex subunit 5 OS=Xenopus tropicalis GN=cops5 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.967e-14 Identity = 41/81 (50.62%), Postives = 54/81 (66.67%), Query Frame = -3 Query: 354 SFSPLLGNGEYVAGQILDLAEKLEQAENQLFHSRYGPLIAPPPRRKEEDSQLAKITRDSGKITVEQVHGLMSQVIKDILFN 596 S S LL N +Y GQ+ DL+EKLEQ+E QL + ++ ++ + +LAK TRDS K T+E +HGLMSQVIKD LFN Sbjct: 251 SSSSLLTNADYTTGQVFDLSEKLEQSEAQLGRGSF--MLGLETHDRKSEDKLAKATRDSCKTTIEAIHGLMSQVIKDKLFN 329
BLAST of DN621037 vs. ExPASy Swiss-Prot
Match: CSN5_MOUSE (COP9 signalosome complex subunit 5 OS=Mus musculus GN=Cops5 PE=1 SV=3) HSP 1 Score: 77.411 bits (189), Expect = 5.967e-14 Identity = 41/81 (50.62%), Postives = 54/81 (66.67%), Query Frame = -3 Query: 354 SFSPLLGNGEYVAGQILDLAEKLEQAENQLFHSRYGPLIAPPPRRKEEDSQLAKITRDSGKITVEQVHGLMSQVIKDILFN 596 S S LL N +Y GQ+ DL+EKLEQ+E QL + ++ ++ + +LAK TRDS K T+E +HGLMSQVIKD LFN Sbjct: 251 SSSSLLTNADYTTGQVFDLSEKLEQSEAQLGRGSF--MLGLETHDRKSEDKLAKATRDSCKTTIEAIHGLMSQVIKDKLFN 329
BLAST of DN621037 vs. ExPASy Swiss-Prot
Match: CSN5_DROME (COP9 signalosome complex subunit 5 OS=Drosophila melanogaster GN=CSN5 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 9.527e-12 Identity = 38/81 (46.91%), Postives = 50/81 (61.73%), Query Frame = -3 Query: 348 SPLLGNGEYVAGQILDLAEKLEQAENQLFHSRYGPLIAPPPRRKEEDSQLAKITRDSGKITVEQVHGLMSQVIKDILFNFV 590 S LL N EY GQI+DL+EKLEQ+EN L K + +L+K TRD + T+E +HGLM+Q++KD LFN V Sbjct: 250 SGLLTNTEYTTGQIMDLSEKLEQSENFLGRGT-------DVNEKRSEDKLSKATRDCSRSTIELIHGLMAQIVKDKLFNKV 323 The following BLAST results are available for this feature:
BLAST of DN621037 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DN621037 ID=DN621037; Name=DN621037; organism=Citrus sinensis; type=EST; length=598bpback to top |