DN621028

Overview
NameDN621028
Unique NameDN621028
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length628
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621028 vs. ExPASy Swiss-Prot
Match: FTSH1_ORYSJ (Cell division protease ftsH homolog 1, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH1 PE=2 SV=1)

HSP 1 Score: 335.109 bits (858), Expect = 1.763e-91
Identity = 172/179 (96.09%), Postives = 176/179 (98.32%), Query Frame = -2
Query:   91 YDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAELFVA 627
            YDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFG+ENVTTGASNDFMQVSRVARQMVERFGFSKKIG VAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVE AY+RA QIITTHIDILHKLAQLL+EKETVDGEEFMSLFIDG+AELFVA
Sbjct:  508 YDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGQENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVEKAYSRATQIITTHIDILHKLAQLLMEKETVDGEEFMSLFIDGQAELFVA 686          
BLAST of DN621028 vs. ExPASy Swiss-Prot
Match: FTSH1_ARATH (Cell division protease ftsH homolog 1, chloroplastic OS=Arabidopsis thaliana GN=FTSH1 PE=1 SV=2)

HSP 1 Score: 329.717 bits (844), Expect = 7.406e-90
Identity = 165/179 (92.18%), Postives = 175/179 (97.77%), Query Frame = -2
Query:   91 YDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAELFVA 627
            YDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFG+ENVTTGASNDFMQVSRVARQM+ERFGFSKKIG VA+GGPGGNPF+GQQMSSQKDYSMATAD+VDAEVRELVE AY RA +IITTHIDILHKLAQLLIEKETVDGEEFMSLFIDG+AEL+++
Sbjct:  538 YDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQMIERFGFSKKIGQVAVGGPGGNPFMGQQMSSQKDYSMATADIVDAEVRELVEKAYKRATEIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGQAELYIS 716          
BLAST of DN621028 vs. ExPASy Swiss-Prot
Match: FTSH5_ARATH (Cell division protease ftsH homolog 5, chloroplastic OS=Arabidopsis thaliana GN=FTSH5 PE=1 SV=1)

HSP 1 Score: 326.25 bits (835), Expect = 8.189e-89
Identity = 167/179 (93.30%), Postives = 173/179 (96.65%), Query Frame = -2
Query:   91 YDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAELFVA 627
            YDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFG+ENVTTGASNDFMQVSRVARQMVERFGFSKKIG VA+GG GGNPFLGQ MSSQKDYSMATADVVDAEVRELVE AY RAK+IITT IDILHKLAQLLIEKETVDGEEFMSLFIDG+AEL+V+
Sbjct:  526 YDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAVGGAGGNPFLGQSMSSQKDYSMATADVVDAEVRELVEKAYVRAKEIITTQIDILHKLAQLLIEKETVDGEEFMSLFIDGQAELYVS 704          
BLAST of DN621028 vs. ExPASy Swiss-Prot
Match: FTSH_TOBAC (Cell division protease ftsH homolog, chloroplastic OS=Nicotiana tabacum GN=FTSH PE=2 SV=2)

HSP 1 Score: 322.013 bits (824), Expect = 1.544e-87
Identity = 165/179 (92.18%), Postives = 172/179 (96.09%), Query Frame = -2
Query:   91 YDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAELFVA 627
            YDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALG RVAEEVIFG++NVTTGASNDFMQVSRVARQMVER GFSKKIG VAIGG GGNPFLGQQMS+QKDYSMATADVVDAEVRELVE AY RA +IITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAEL+++
Sbjct:  529 YDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGERVAEEVIFGQDNVTTGASNDFMQVSRVARQMVERLGFSKKIGQVAIGGGGGNPFLGQQMSTQKDYSMATADVVDAEVRELVERAYERATEIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAELYIS 707          
BLAST of DN621028 vs. ExPASy Swiss-Prot
Match: FTSH_MEDSA (Cell division protease ftsH homolog, chloroplastic OS=Medicago sativa GN=FTSH PE=2 SV=1)

HSP 1 Score: 318.546 bits (815), Expect = 1.707e-86
Identity = 165/179 (92.18%), Postives = 171/179 (95.53%), Query Frame = -2
Query:   91 YDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAELFVA 627
            YDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV FG++NVTTGASNDFMQVSRVARQMVERFGFSKKIG VAIGG GGNPFLGQQMSSQKDYSMATAD+VD EVRELV+ AY RA QII THIDILHKLAQLLIEKETVDGEEFMSLFIDGKAEL+V+
Sbjct:  529 YDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV-FGQDNVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGGGGNPFLGQQMSSQKDYSMATADIVDKEVRELVDKAYERATQIINTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAELYVS 706          
BLAST of DN621028 vs. ExPASy Swiss-Prot
Match: FTSH_CAPAN (Cell division protease ftsH homolog, chloroplastic (Fragment) OS=Capsicum annuum GN=FTSH PE=2 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 1.109e-77
Identity = 149/157 (94.90%), Postives = 152/157 (96.82%), Query Frame = -2
Query:  157 YDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEK 627
            YDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGE+NVTTGASNDFMQVSRVARQMVER GFSKKIG VAIGG GGNPFLGQQMS+QKDYSMATADVVD+EVRELVE AY RAKQIITTHIDILHKLAQLLIEK
Sbjct:  506 YDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEDNVTTGASNDFMQVSRVARQMVERLGFSKKIGQVAIGGGGGNPFLGQQMSTQKDYSMATADVVDSEVRELVEKAYERAKQIITTHIDILHKLAQLLIEK 662          
BLAST of DN621028 vs. ExPASy Swiss-Prot
Match: FTSH4_SYNY3 (Cell division protease ftsH homolog 4 OS=Synechocystis sp. (strain PCC 6803) GN=slr1604 PE=3 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 6.761e-59
Identity = 112/176 (63.64%), Postives = 141/176 (80.11%), Query Frame = -2
Query:  100 YDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAEL 627
            YDPV KISIIPRG+AGGLT+F PSE+R+ESGLYSRSYL+NQMAVALGGR+AEE+IFGEE VTTGASND  QV+RVARQMV RFG S ++G VA+G  GG  FLG+ ++S +D+S  TA  +D EV +LV+ AY RAKQ++  +  IL +LA++L+EKETVD EE  +L  +  A+L
Sbjct:  437 YDPVQKISIIPRGRAGGLTWFTPSEDRMESGLYSRSYLQNQMAVALGGRIAEEIIFGEEEVTTGASNDLQQVARVARQMVTRFGMSDRLGPVALGRQGGGVFLGRDIASDRDFSDETAAAIDEEVSQLVDQAYQRAKQVLVENRGILDQLAEILVEKETVDSEELQTLLANNNAKL 612          
BLAST of DN621028 vs. ExPASy Swiss-Prot
Match: FSTH_PORYE (Cell division protease ftsH homolog OS=Porphyra yezoensis GN=ftsH PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 5.951e-39
Identity = 84/168 (50.00%), Postives = 116/168 (69.05%), Query Frame = -2
Query:  124 YDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 627
            +DPV K+++IPRGQA GLT+F PS+++    L SRS +  ++  ALGGR AEE+IFG+  VTTGASND  QV+ +ARQMV RFG SK IG +++   GG+PFLG+ M    +YS   A  +D +VRE+V   Y +AK II  +  ++ +L  LLIEKET++G EF  +
Sbjct:  448 HDPVQKVTLIPRGQARGLTWFTPSDDQ---SLISRSQILARIVGALGGRAAEEIIFGDAEVTTGASNDLQQVTSMARQMVTRFGMSK-IGPLSLESQGGDPFLGRGMGGGSEYSDEVATNIDKQVREIVSECYAQAKHIIIDNRVVIDRLVDLLIEKETIEGNEFRDI 611          
BLAST of DN621028 vs. ExPASy Swiss-Prot
Match: FTSH_PORPU (Cell division protease ftsH homolog OS=Porphyra purpurea GN=ftsH PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 6.579e-38
Identity = 82/165 (49.70%), Postives = 114/165 (69.09%), Query Frame = -2
Query:  133 YDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEF 627
            +DPV K+++IPRGQA GLT+F PS+++    L SRS +  ++  ALGGR AEE+IFG+  VTTGASND  QV+ +ARQMV RFG S KIG +++   G +PFLG+ M    +YS   A  +D +VRE+V   Y  AK+I+  +  ++ +L  LLIEKET++G EF
Sbjct:  448 HDPVQKVTLIPRGQARGLTWFTPSDDQ---SLISRSQILARIVGALGGRAAEEIIFGDAEVTTGASNDLQQVTSMARQMVTRFGMS-KIGPLSLESQGSDPFLGRGMGGGSEYSDEVATNIDKQVREIVSECYKEAKKIVKDNRVVMDRLVDLLIEKETIEGNEF 608          
BLAST of DN621028 vs. ExPASy Swiss-Prot
Match: FTSH1_SYNY3 (Cell division protease ftsH homolog 1 OS=Synechocystis sp. (strain PCC 6803) GN=slr0228 PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 9.501e-37
Identity = 77/168 (45.83%), Postives = 116/168 (69.05%), Query Frame = -2
Query:  124 YDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 627
            +DPV K+++IPRGQA GLT+F P+EE+   GL +++ L  ++A A+GGR AEE +FG++ VTTGA  D  QV+ +ARQMV RFG S  +G +++   GG  FLG  + ++ +YS   A  +DA+VR+L E  +  A++I+    +++ +L  LLIEKET+DGEEF  +
Sbjct:  447 HDPVQKVTLIPRGQAQGLTWFTPNEEQ---GLTTKAQLMARIAGAMGGRAAEEEVFGDDEVTTGAGGDLQQVTEMARQMVTRFGMSN-LGPISLESSGGEVFLGGGLMNRSEYSEEVATRIDAQVRQLAEQGHQMARKIVQEQREVVDRLVDLLIEKETIDGEEFRQI 610          
The following BLAST results are available for this feature:
BLAST of DN621028 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
FTSH1_ORYSJ1.763e-9196.09Cell division protease ftsH homolog 1, chloroplast... [more]
FTSH1_ARATH7.406e-9092.18Cell division protease ftsH homolog 1, chloroplast... [more]
FTSH5_ARATH8.189e-8993.30Cell division protease ftsH homolog 5, chloroplast... [more]
FTSH_TOBAC1.544e-8792.18Cell division protease ftsH homolog, chloroplastic... [more]
FTSH_MEDSA1.707e-8692.18Cell division protease ftsH homolog, chloroplastic... [more]
FTSH_CAPAN1.109e-7794.90Cell division protease ftsH homolog, chloroplastic... [more]
FTSH4_SYNY36.761e-5963.64Cell division protease ftsH homolog 4 OS=Synechocy... [more]
FSTH_PORYE5.951e-3950.00Cell division protease ftsH homolog OS=Porphyra ye... [more]
FTSH_PORPU6.579e-3849.70Cell division protease ftsH homolog OS=Porphyra pu... [more]
FTSH1_SYNY39.501e-3745.83Cell division protease ftsH homolog 1 OS=Synechocy... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06C08_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621028 ID=DN621028; Name=DN621028; organism=Citrus sinensis; type=EST; length=628bp
TTTTTTTTTCTAAAATGATAATTTAATTACTTGATTTTACATGGGCATAT
ACAACACGAATCTGAATTCTGATTCTTTCATGTACAATCAGGCAACAAAT
AGCTCAGCTTTTCCATCAATGAAAAGGCTCATAAATTCTTCTCCATCAAC
GGTTTCTTTCTCTATGAGGAGTTGAGCAAGCTTGTGAAGGATGTCAATGT
GGGTTGTGATGATCTGCTTGGCCCTTGTATATGCTGTTTCAACCAATTCT
CTGACCTCTGCATCCACCACATCGGCAGTTGCCATGGAGTAGTCTTTCTG
AGAAGACATTTGTTGACCCAAGAATGGATTTCCACCAGGTCCTCCAATGG
CAACTAGTCCAATTTTCTTGCTAAACCCAAATCTTTCAACCATCTGCCGT
GCTACCCGTGAAACTTGCATGAAGTCATTTGATGCTCCTGTTGTCACATT
TTCCTCGCCAAAAATGACTTCTTCTGCAACCCTTCCACCAAGTGCGACAG
CCATCTGATTCTCCAGGTAGCTCCTGCTGTAAAGTCCAGACTCAAGCCTC
TCTTCACTTGGAGCGAAAAAGGTAAGCCCACCAGCTTGGCCACGAGGAAT
GATGGAAATCTTGGCTACAGGATCATAT
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