DN621027

Overview
NameDN621027
Unique NameDN621027
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length651
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621027 vs. ExPASy Swiss-Prot
Match: FTSH1_ORYSJ (Cell division protease ftsH homolog 1, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH1 PE=2 SV=1)

HSP 1 Score: 350.132 bits (897), Expect = 5.678e-96
Identity = 180/187 (96.26%), Postives = 184/187 (98.40%), Query Frame = 2
Query:    2 LVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAELFVA 562
            LVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFG+ENVTTGASNDFMQVSRVARQMVERFGFSKKIG VAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVE AY+RA QIITTHIDILHKLAQLL+EKETVDGEEFMSLFIDG+AELFVA
Sbjct:  500 LVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGQENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVEKAYSRATQIITTHIDILHKLAQLLMEKETVDGEEFMSLFIDGQAELFVA 686          
BLAST of DN621027 vs. ExPASy Swiss-Prot
Match: FTSH1_ARATH (Cell division protease ftsH homolog 1, chloroplastic OS=Arabidopsis thaliana GN=FTSH1 PE=1 SV=2)

HSP 1 Score: 344.739 bits (883), Expect = 2.385e-94
Identity = 173/187 (92.51%), Postives = 183/187 (97.86%), Query Frame = 2
Query:    2 LVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAELFVA 562
            LVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFG+ENVTTGASNDFMQVSRVARQM+ERFGFSKKIG VA+GGPGGNPF+GQQMSSQKDYSMATAD+VDAEVRELVE AY RA +IITTHIDILHKLAQLLIEKETVDGEEFMSLFIDG+AEL+++
Sbjct:  530 LVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQMIERFGFSKKIGQVAVGGPGGNPFMGQQMSSQKDYSMATADIVDAEVRELVEKAYKRATEIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGQAELYIS 716          
BLAST of DN621027 vs. ExPASy Swiss-Prot
Match: FTSH5_ARATH (Cell division protease ftsH homolog 5, chloroplastic OS=Arabidopsis thaliana GN=FTSH5 PE=1 SV=1)

HSP 1 Score: 341.273 bits (874), Expect = 2.637e-93
Identity = 175/187 (93.58%), Postives = 181/187 (96.79%), Query Frame = 2
Query:    2 LVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAELFVA 562
            LVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFG+ENVTTGASNDFMQVSRVARQMVERFGFSKKIG VA+GG GGNPFLGQ MSSQKDYSMATADVVDAEVRELVE AY RAK+IITT IDILHKLAQLLIEKETVDGEEFMSLFIDG+AEL+V+
Sbjct:  518 LVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAVGGAGGNPFLGQSMSSQKDYSMATADVVDAEVRELVEKAYVRAKEIITTQIDILHKLAQLLIEKETVDGEEFMSLFIDGQAELYVS 704          
BLAST of DN621027 vs. ExPASy Swiss-Prot
Match: FTSH_TOBAC (Cell division protease ftsH homolog, chloroplastic OS=Nicotiana tabacum GN=FTSH PE=2 SV=2)

HSP 1 Score: 337.035 bits (863), Expect = 4.974e-92
Identity = 173/187 (92.51%), Postives = 180/187 (96.26%), Query Frame = 2
Query:    2 LVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAELFVA 562
            LVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALG RVAEEVIFG++NVTTGASNDFMQVSRVARQMVER GFSKKIG VAIGG GGNPFLGQQMS+QKDYSMATADVVDAEVRELVE AY RA +IITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAEL+++
Sbjct:  521 LVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGERVAEEVIFGQDNVTTGASNDFMQVSRVARQMVERLGFSKKIGQVAIGGGGGNPFLGQQMSTQKDYSMATADVVDAEVRELVERAYERATEIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAELYIS 707          
BLAST of DN621027 vs. ExPASy Swiss-Prot
Match: FTSH_MEDSA (Cell division protease ftsH homolog, chloroplastic OS=Medicago sativa GN=FTSH PE=2 SV=1)

HSP 1 Score: 333.569 bits (854), Expect = 5.499e-91
Identity = 173/187 (92.51%), Postives = 179/187 (95.72%), Query Frame = 2
Query:    2 LVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAELFVA 562
            LVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV FG++NVTTGASNDFMQVSRVARQMVERFGFSKKIG VAIGG GGNPFLGQQMSSQKDYSMATAD+VD EVRELV+ AY RA QII THIDILHKLAQLLIEKETVDGEEFMSLFIDGKAEL+V+
Sbjct:  521 LVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV-FGQDNVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGGGGNPFLGQQMSSQKDYSMATADIVDKEVRELVDKAYERATQIINTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAELYVS 706          
BLAST of DN621027 vs. ExPASy Swiss-Prot
Match: FTSH_CAPAN (Cell division protease ftsH homolog, chloroplastic (Fragment) OS=Capsicum annuum GN=FTSH PE=2 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 3.573e-82
Identity = 157/165 (95.15%), Postives = 160/165 (96.97%), Query Frame = 2
Query:    2 LVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEK 496
            LVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGE+NVTTGASNDFMQVSRVARQMVER GFSKKIG VAIGG GGNPFLGQQMS+QKDYSMATADVVD+EVRELVE AY RAKQIITTHIDILHKLAQLLIEK
Sbjct:  498 LVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEDNVTTGASNDFMQVSRVARQMVERLGFSKKIGQVAIGGGGGNPFLGQQMSTQKDYSMATADVVDSEVRELVEKAYERAKQIITTHIDILHKLAQLLIEK 662          
BLAST of DN621027 vs. ExPASy Swiss-Prot
Match: FTSH4_SYNY3 (Cell division protease ftsH homolog 4 OS=Synechocystis sp. (strain PCC 6803) GN=slr1604 PE=3 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 4.851e-63
Identity = 119/184 (64.67%), Postives = 149/184 (80.98%), Query Frame = 2
Query:    2 LVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAEL 553
            LVGALMP+YDPV KISIIPRG+AGGLT+F PSE+R+ESGLYSRSYL+NQMAVALGGR+AEE+IFGEE VTTGASND  QV+RVARQMV RFG S ++G VA+G  GG  FLG+ ++S +D+S  TA  +D EV +LV+ AY RAKQ++  +  IL +LA++L+EKETVD EE  +L  +  A+L
Sbjct:  429 LVGALMPDYDPVQKISIIPRGRAGGLTWFTPSEDRMESGLYSRSYLQNQMAVALGGRIAEEIIFGEEEVTTGASNDLQQVARVARQMVTRFGMSDRLGPVALGRQGGGVFLGRDIASDRDFSDETAAAIDEEVSQLVDQAYQRAKQVLVENRGILDQLAEILVEKETVDSEELQTLLANNNAKL 612          
BLAST of DN621027 vs. ExPASy Swiss-Prot
Match: FSTH_PORYE (Cell division protease ftsH homolog OS=Porphyra yezoensis GN=ftsH PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 6.817e-41
Identity = 86/176 (48.86%), Postives = 122/176 (69.32%), Query Frame = 2
Query:    2 LVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 529
            ++G+L+  +DPV K+++IPRGQA GLT+F PS+++    L SRS +  ++  ALGGR AEE+IFG+  VTTGASND  QV+ +ARQMV RFG SK IG +++   GG+PFLG+ M    +YS   A  +D +VRE+V   Y +AK II  +  ++ +L  LLIEKET++G EF  +
Sbjct:  440 IIGSLLEHHDPVQKVTLIPRGQARGLTWFTPSDDQ---SLISRSQILARIVGALGGRAAEEIIFGDAEVTTGASNDLQQVTSMARQMVTRFGMSK-IGPLSLESQGGDPFLGRGMGGGSEYSDEVATNIDKQVREIVSECYAQAKHIIIDNRVVIDRLVDLLIEKETIEGNEFRDI 611          
BLAST of DN621027 vs. ExPASy Swiss-Prot
Match: FTSH_PORPU (Cell division protease ftsH homolog OS=Porphyra purpurea GN=ftsH PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 7.537e-40
Identity = 84/173 (48.55%), Postives = 120/173 (69.36%), Query Frame = 2
Query:    2 LVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEF 520
            ++G+L+  +DPV K+++IPRGQA GLT+F PS+++    L SRS +  ++  ALGGR AEE+IFG+  VTTGASND  QV+ +ARQMV RFG S KIG +++   G +PFLG+ M    +YS   A  +D +VRE+V   Y  AK+I+  +  ++ +L  LLIEKET++G EF
Sbjct:  440 IIGSLLEHHDPVQKVTLIPRGQARGLTWFTPSDDQ---SLISRSQILARIVGALGGRAAEEIIFGDAEVTTGASNDLQQVTSMARQMVTRFGMS-KIGPLSLESQGSDPFLGRGMGGGSEYSDEVATNIDKQVREIVSECYKEAKKIVKDNRVVMDRLVDLLIEKETIEGNEF 608          
BLAST of DN621027 vs. ExPASy Swiss-Prot
Match: FTSH1_SYNY3 (Cell division protease ftsH homolog 1 OS=Synechocystis sp. (strain PCC 6803) GN=slr0228 PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 6.380e-39
Identity = 80/176 (45.45%), Postives = 122/176 (69.32%), Query Frame = 2
Query:    2 LVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 529
            +VG L+ ++DPV K+++IPRGQA GLT+F P+EE+   GL +++ L  ++A A+GGR AEE +FG++ VTTGA  D  QV+ +ARQMV RFG S  +G +++   GG  FLG  + ++ +YS   A  +DA+VR+L E  +  A++I+    +++ +L  LLIEKET+DGEEF  +
Sbjct:  439 IVGTLLKDHDPVQKVTLIPRGQAQGLTWFTPNEEQ---GLTTKAQLMARIAGAMGGRAAEEEVFGDDEVTTGAGGDLQQVTEMARQMVTRFGMSN-LGPISLESSGGEVFLGGGLMNRSEYSEEVATRIDAQVRQLAEQGHQMARKIVQEQREVVDRLVDLLIEKETIDGEEFRQI 610          
The following BLAST results are available for this feature:
BLAST of DN621027 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
FTSH1_ORYSJ5.678e-9696.26Cell division protease ftsH homolog 1, chloroplast... [more]
FTSH1_ARATH2.385e-9492.51Cell division protease ftsH homolog 1, chloroplast... [more]
FTSH5_ARATH2.637e-9393.58Cell division protease ftsH homolog 5, chloroplast... [more]
FTSH_TOBAC4.974e-9292.51Cell division protease ftsH homolog, chloroplastic... [more]
FTSH_MEDSA5.499e-9192.51Cell division protease ftsH homolog, chloroplastic... [more]
FTSH_CAPAN3.573e-8295.15Cell division protease ftsH homolog, chloroplastic... [more]
FTSH4_SYNY34.851e-6364.67Cell division protease ftsH homolog 4 OS=Synechocy... [more]
FSTH_PORYE6.817e-4148.86Cell division protease ftsH homolog OS=Porphyra ye... [more]
FTSH_PORPU7.537e-4048.55Cell division protease ftsH homolog OS=Porphyra pu... [more]
FTSH1_SYNY36.380e-3945.45Cell division protease ftsH homolog 1 OS=Synechocy... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06C08_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621027 ID=DN621027; Name=DN621027; organism=Citrus sinensis; type=EST; length=651bp
TTTAGTTGGGGCTCTCATGCCTGAATATGATCCTGTAGCCAAGATTTCCA
TCATTCCTCGTGGCCAAGCTGGTGGGCTTACCTTTTTCGCTCCAAGTGAA
GAGAGGCTTGAGTCTGGACTTTACAGCAGGAGCTACCTGGAGAATCAGAT
GGCTGTCGCACTTGGTGGAAGGGTTGCAGAAGAAGTCATTTTTGGCGAGG
AAAATGTGACAACAGGAGCATCAAATGACTTCATGCAAGTTTCACGGGTA
GCACGGCAGATGGTTGAAAGATTTGGGTTTAGCAAGAAAATTGGACTAGT
TGCCATTGGAGGACCTGGTGGAAATCCATTCTTGGGTCAACAAATGTCTT
CTCAGAAAGACTACTCCATGGCAACTGCCGATGTGGTGGATGCAGAGGTC
AGAGAATTGGTTGAAACAGCATATACAAGGGCCAAGCAGATCATCACAAC
CCACATTGACATCCTTCACAAGCTTGCTCAACTCCTCATAGAGAAAGAAA
CCGTTGATGGAGAAGAATTTATGAGCCTTTTCATTGATGGAAAAGCTGAG
CTATTTGTTGCCTGATTGTACATGAAAGAATCAGAATTCAGATTCGTGTT
GTATATGCCCATGTAAAATCAAGTAATTAAATTATCATTTTAGAAAAAAA
A
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