DN621022

Overview
NameDN621022
Unique NameDN621022
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length421
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DN621022 vs. ExPASy Swiss-Prot
Match: AL121_ARATH (Delta-1-pyrroline-5-carboxylate dehydrogenase 12A1, mitochondrial OS=Arabidopsis thaliana GN=ALDH12A1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.038e-12
Identity = 29/35 (82.86%), Postives = 32/35 (91.43%), Query Frame = 3 
Query:    3 GIGTPEAIKLVWSSHREIIYDYGPIPGNWEIPPST 107
            GIGTPEAIKLVWS HRE+IYDYGP+P  WE+PPST
Sbjct:  522 GIGTPEAIKLVWSCHREVIYDYGPVPQGWELPPST 556
[Close]
BLAST of DN621022 vs. ExPASy Swiss-Prot
Match: ALDH_LINUS (Probable aldehyde dehydrogenase OS=Linum usitatissimum GN=FIS1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.556e-11
Identity = 29/35 (82.86%), Postives = 31/35 (88.57%), Query Frame = 3 
Query:    3 GIGTPEAIKLVWSSHREIIYDYGPIPGNWEIPPST 107
            GIGTPEAIKLVWS HREIIYD GP+  +WEIPPST
Sbjct:  517 GIGTPEAIKLVWSCHREIIYDIGPVSHHWEIPPST 551
The following BLAST results are available for this feature:
BLAST of DN621022 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
AL121_ARATH1.038e-1282.86Delta-1-pyrroline-5-carboxylate dehydrogenase 12A1... [more]
ALDH_LINUS2.556e-1182.86Probable aldehyde dehydrogenase OS=Linum usitatiss... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_06C05_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621022 ID=DN621022; Name=DN621022; organism=Citrus sinensis; type=EST; length=421bp
CAGGAATTGGAACCCCGGAAGCAATAAAACTTGTTTGGTCTTCCCATAGA
GAAATCATATACGATTATGGTCCTATACCAGGGAATTGGGAGATTCCACC
ATCTACTTGAAGATTCCCATTGGTTAGAAGGCATCAAGATTAATCCTGAA
GAGAGTTTATGATCCTCAATATAATAATACATCTGATAGCAGCTTAGTAT
TTATCATTCCTTGGTTATCCTAGCTAGTTTTATGAAATAAAAAATATGGG
CAATTTTGTATTTCACAAATTGATACTGAGAATTATGCAACTCCTTTCGG
CCCATCTCCTGTGGTGAACGCATGAGCATGCAGCAAAAAATGAGTTTTAA
TTTTATGTTATGAATGGTATGCGTATCTCCAATAATTAATTTCCATATAG
TGGCCAAAAAAAAAAAAAAAA
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