DN621005

Overview
NameDN621005
Unique NameDN621005
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length728
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621005 vs. ExPASy Swiss-Prot
Match: LOX2_ARATH (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 1.605e-76
Identity = 131/189 (69.31%), Postives = 151/189 (79.89%), Query Frame = -1
Query:  159 WWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVPY 725
            WW+E+R +GHGDKK EPWWPVLKT  DLI ++TTI WVTSGHHAAVNFGQY YGGYFPNRPTT R  + TEDP+DE  K F E PE  LL T+PSQ QAT VM  LD+LSTHSPDEEY+G++ E +W  +PVINAAFE+F+GKL  LEG+ID RN +  L+NR GAG+V YELLKP SE GVTG GVPY
Sbjct:  704 WWSEVRNIGHGDKKDEPWWPVLKTQDDLIGVVTTIAWVTSGHHAAVNFGQYGYGGYFPNRPTTTRIRMPTEDPTDEALKEFYESPEKVLLKTYPSQKQATLVMVTLDLLSTHSPDEEYIGEQQEASWANEPVINAAFERFKGKLQYLEGVIDERNVNITLKNRAGAGVVKYELLKPTSEHGVTGMGVPY 892          
BLAST of DN621005 vs. ExPASy Swiss-Prot
Match: LOX23_HORVU (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1)

HSP 1 Score: 273.863 bits (699), Expect = 6.311e-73
Identity = 122/189 (64.55%), Postives = 150/189 (79.37%), Query Frame = -1
Query:  162 AWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVP 728
            AWW E+RT GH DKK EPWWPV  T ++L++I+T I+WVTSGHHAAVNFGQY Y GYFPNRPT  R NI  E+  D++ K F+ +PE  LL + PSQ+QA KVMA LD+LS+HSPDEEY+G+  EPAW  +P++ AAFEKF G+L E EG ID RN +P+ +NR GAG+VPYELLKPFSEPGVTG+G+P
Sbjct:  703 AWWEEVRTKGHADKKDEPWWPVCDTKENLVQILTIIMWVTSGHHAAVNFGQYHYAGYFPNRPTVVRRNIPVEENRDDEMKKFMARPEEVLLQSLPSQMQAIKVMATLDILSSHSPDEEYMGEYAEPAWLAEPMVKAAFEKFSGRLKEAEGTIDMRNNNPENKNRCGAGIVPYELLKPFSEPGVTGRGIP 891          
BLAST of DN621005 vs. ExPASy Swiss-Prot
Match: LOXC2_ORYSJ (Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 2.035e-63
Identity = 112/190 (58.95%), Postives = 139/190 (73.16%), Query Frame = -1
Query:  162 AWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATEDPSD-EQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVP 728
            A+WTE+RT GHGDKK  PWWP L +P+ L   +TTIVWV + HHAAVNFGQY +GGYFPNRP+ AR  +  E+P D    + FL+ P+ AL   FPSQ+QAT VMA+LDVLSTHS DEEYLG E    W  D  + AA+  F  +L E+EG+ID RN D KL+NR GAG++PY+L+KPFS+ GVTG G+P
Sbjct:  747 AFWTEVRTKGHGDKKDAPWWPKLDSPESLAHTLTTIVWVAAAHHAAVNFGQYDFGGYFPNRPSIARTVMPVEEPVDGAAMERFLDNPDQALRECFPSQVQATVVMAVLDVLSTHSTDEEYLGGEQTRPWNSDAAVQAAYAGFTARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSDAGVTGMGIP 936          
BLAST of DN621005 vs. ExPASy Swiss-Prot
Match: LOXC1_ORYSJ (Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2)

HSP 1 Score: 241.891 bits (616), Expect = 2.658e-63
Identity = 111/190 (58.42%), Postives = 140/190 (73.68%), Query Frame = -1
Query:  162 AWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATEDPSD-EQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVP 728
            A+WTE+RT GHGDKK  PWWP L +P+ L   +TTIVWV + HHAAVNFGQY +GGYFPNRP+ AR  +  E+P D    + FL+ P+ AL   FPSQ+QAT VMA+LDVLS+HS DEEYLG E    W  D  + AA++ F  +L E+EG+ID RN D KL+NR GAG++PY+L+KPFS+ GVTG G+P
Sbjct:  730 AFWTEVRTKGHGDKKDAPWWPKLDSPESLAHTLTTIVWVAAAHHAAVNFGQYDFGGYFPNRPSIARTVMPVEEPVDGAAMERFLDNPDQALRECFPSQVQATVVMAVLDVLSSHSTDEEYLGGEQTRPWNSDAAVQAAYDGFAARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSDSGVTGMGIP 919          
BLAST of DN621005 vs. ExPASy Swiss-Prot
Match: LOX21_HORVU (Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare GN=LOX2.1 PE=1 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.147e-56
Identity = 103/177 (58.19%), Postives = 129/177 (72.88%), Query Frame = -1
Query:  198 AWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKP 728
            AWWTE+RT GH DK+ EPWWP L + ++L + + TI+WVTSGHHAAVNFGQY   GY PNRPT AR N+ TE   D+  + F+E PE  LL+TFPSQ Q+  V+AILD+LSTHS DEEY+G   EPAW +D VIN AFE+F+    ++   +D  N DP  +NR+GAGMVPY LL+P
Sbjct:  734 AWWTEVRTKGHADKQDEPWWPELDSHENLAQTLATIMWVTSGHHAAVNFGQYPMAGYIPNRPTMARRNMPTEIGGDDM-RDFVEAPEKVLLDTFPSQYQSAIVLAILDLLSTHSSDEEYMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRP 909          
BLAST of DN621005 vs. ExPASy Swiss-Prot
Match: LOX6_ARATH (Lipoxygenase 6, choloroplastic OS=Arabidopsis thaliana GN=LOX6 PE=1 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.012e-54
Identity = 100/191 (52.36%), Postives = 133/191 (69.63%), Query Frame = -1
Query:  162 AWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYL--GKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVP 728
            AWW EI+  GH DKK EPWWP L T +DL +I+T ++W+ SG HAA+NFGQY +GGY PNRPT  R  I  E  +D  ++ F+  P+ + L + P+Q+QATKVMA+ + LSTHSPDEEYL   +E++  W +D  +   F KF  +L+++E  I+ RN D KL+NR GAGM PYELL P S  GVTG+G+P
Sbjct:  724 AWWDEIKNKGHYDKKDEPWWPKLNTTQDLSQILTNMIWIASGQHAAINFGQYPFGGYVPNRPTLLRKLIPQE--TDPDYEMFMRNPQYSFLGSLPTQLQATKVMAVQETLSTHSPDEEYLIELREVQRHWFQDEQVVKYFNKFSEELVKIEKTINERNKDKKLKNRTGAGMPPYELLLPTSPHGVTGRGIP 912          
BLAST of DN621005 vs. ExPASy Swiss-Prot
Match: LOX4_ARATH (Lipoxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=LOX4 PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 8.868e-51
Identity = 97/190 (51.05%), Postives = 126/190 (66.32%), Query Frame = -1
Query:  162 AWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPA-WREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVP 728
            AW++E   VGH D +   WWP L T +DL+ +ITTI+W+ S  HAA+NFGQY YGGY PNRP   R  I   D SD ++  F+E P+    ++ PS +Q TK MA++D LSTHSPDEEY+G+  +P+ W  D  I  AF  F  ++  +E  ID RN DP  RNR GAG++PYEL+ P SEPGVT +GVP
Sbjct:  734 AWYSESINVGHADHRDAEWWPKLSTVEDLVSVITTIIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLI--PDESDPEFTSFIEDPQKYFFSSMPSLLQTTKFMAVVDTLSTHSPDEEYIGERQQPSIWTGDAEIVDAFYGFSAEIGRIEKEIDKRNRDPSRRNRCGAGVLPYELMAPSSEPGVTCRGVP 921          
BLAST of DN621005 vs. ExPASy Swiss-Prot
Match: LOX3_ARATH (Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=LOX3 PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 6.355e-49
Identity = 95/190 (50.00%), Postives = 124/190 (65.26%), Query Frame = -1
Query:  162 AWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPA-WREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVP 728
            +W++E   VGH D +   WWP L T  DL+ I+TT++W+ S  HAA+NFGQY YGGY PNRP   R  I   D SD ++  F+  PE    ++ PS  Q +K MA++D LSTHSPDEEY+G+  +P+ W  D  I  AF  F  ++  +E  I+ RNADP  RNR GAG++PYELL P SEPGVT +GVP
Sbjct:  727 SWYSESINVGHADLRDADWWPELSTVDDLVSILTTLIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLI--PDESDPEYASFISHPEKYYFSSMPSLAQTSKFMAVVDTLSTHSPDEEYIGERQQPSIWTGDAEIVEAFYGFAAEIGRIEKEIEKRNADPDRRNRCGAGVLPYELLVPSSEPGVTCRGVP 914          
BLAST of DN621005 vs. ExPASy Swiss-Prot
Match: LOX22_HORVU (Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare GN=LOX2.2 PE=1 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.154e-48
Identity = 90/187 (48.13%), Postives = 122/187 (65.24%), Query Frame = -1
Query:  165 WWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGV 725
            WWTE+RT GH DK+ EPWWP L   + L++++ TI+WVTS HHAAVNFGQY   GY PN P+ AR N+  E    E+   F   PE   L+T PSQ+Q   VMA LD+LS+H+ DEEY+G   EPAW+ D  ++ AF+ F+ K+ ++   ++  N D   RNR+GAG+VPY LL+P +   +  K V
Sbjct:  736 WWTEVRTKGHPDKQDEPWWPELDCHESLVQVLATIMWVTSAHHAAVNFGQYPMAGYVPNHPSIARRNMPCE-MGPEEMLAFKAAPEKVWLDTLPSQLQTVMVMATLDLLSSHASDEEYMGTHQEPAWQRDGEVDKAFQVFQKKMRDIAEQVEEWNKDDSRRNRHGAGVVPYVLLRPLNGNPMDAKTV 921          
BLAST of DN621005 vs. ExPASy Swiss-Prot
Match: LOX1_SOLTU (Lipoxygenase 1 OS=Solanum tuberosum GN=LOX1.1 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 5.380e-48
Identity = 90/189 (47.62%), Postives = 124/189 (65.61%), Query Frame = -1
Query:  162 AWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVP 728
            AWW E+R VGHGDKK+EPWWP ++TP++LI+  TTI+W+ S  HAAVNFGQY Y GY PNRPT +R  +   +P   +++     P+ A L T  +Q+Q    ++++++LS H+ DE YLG+   P W +D    AAF++F  KL ++E  I  RN D  L NR+G    PY LL P SE G+TGKG+P
Sbjct:  670 AWWKELREVGHGDKKNEPWWPEMETPQELIDSCTTIIWIASALHAAVNFGQYPYAGYLPNRPTVSRRFM--PEPGTPEYEELKRNPDKAFLKTITAQLQTLLGVSLVEILSRHTTDEIYLGQRESPEWTKDKEPLAAFDRFGKKLTDIEKQIIQRNGDNILTNRSGPVNAPYTLLFPTSEGGLTGKGIP 856          
The following BLAST results are available for this feature:
BLAST of DN621005 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
LOX2_ARATH1.605e-7669.31Lipoxygenase 2, chloroplastic OS=Arabidopsis thali... [more]
LOX23_HORVU6.311e-7364.55Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare... [more]
LOXC2_ORYSJ2.035e-6358.95Probable lipoxygenase 8, chloroplastic OS=Oryza sa... [more]
LOXC1_ORYSJ2.658e-6358.42Lipoxygenase 7, chloroplastic OS=Oryza sativa subs... [more]
LOX21_HORVU3.147e-5658.19Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare... [more]
LOX6_ARATH1.012e-5452.36Lipoxygenase 6, choloroplastic OS=Arabidopsis thal... [more]
LOX4_ARATH8.868e-5151.05Lipoxygenase 4, chloroplastic OS=Arabidopsis thali... [more]
LOX3_ARATH6.355e-4950.00Lipoxygenase 3, chloroplastic OS=Arabidopsis thali... [more]
LOX22_HORVU3.154e-4848.13Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare... [more]
LOX1_SOLTU5.380e-4847.62Lipoxygenase 1 OS=Solanum tuberosum GN=LOX1.1 PE=2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06B21_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006B21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621005 ID=DN621005; Name=DN621005; organism=Citrus sinensis; type=EST; length=728bp
CTTTTTTTTTTTTAGAGAATAATTACTTAATAATATAACACCGACAGCAA
CATTAACTGCAATTTATTTGATTCATTCTTGAACTCATTCTCAAAAGTTT
TTATTGATACAACATTCGAGCGATTGCAACAACATTTTCAACTCTAGATA
GAGATGCTGTACGGAACTCCTTTTCCTGTAACACCAGGTTCCGAAAATGG
CTTCAAGAGCTCATATGGCACCATCCCAGCTCCATTTCTATTCCTCAACT
TGGGATCTGCATTCCTTGCATCAATAATCCCTTCAAGCTCCATTAACTTG
CCTCTAAACTTTTCAAATGCTGCATTTATAACCGGATCCTCACGCCATGC
TGGCTCTATTTCTTTTCCTAAATACTCCTCATCAGGAGAATGAGTCGATA
AAACATCAAGAATAGCCATAACTTTAGTAGCTTGAATCTGGGAAGGGAAG
GTATTCAAAAGTGCATTTTCAGGTTTTTCAAGGAAGAATTTCCATTGTTC
ATCAGATGGATCTTCAGTGGCAATGTTGCATCTTGCAGTGGTTGGCCTAT
TGGGGAAATAGCCTCCGTAAGTGTATTGGCCGAAGTTAACAGCTGCGTGG
TGACCAGATGTTACCCAAACAATAGTTGTGATGATTTCAATTAAATCCTT
AGGGGTTTTCAAGACAGGCCACCAAGGTTCATGTTTCTTGTCACCGTGTC
CCACAGTTCGAATTTCAGTCCACCAAGC
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