DN621004

Overview
NameDN621004
Unique NameDN621004
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length656
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621004 vs. ExPASy Swiss-Prot
Match: MOMAS_ORYSJ (Momilactone A synthase OS=Oryza sativa subsp. japonica GN=Os04g0179200 PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.182e-48
Identity = 102/187 (54.55%), Postives = 134/187 (71.66%), Query Frame = -2
Query:  104 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMY---SNLKGA-VLEPEDIAEAALYLGSDESKCVSGHNLVVDGGFAIVNAGFSVF 652
            AV ++GKLD+MFNNAG        + +  + +FER+L++NLVG FLGTKHAARVM PA RGSIISTAS+   + GAA+HAY +SKH L+G  +N A ELGR GIRVNCVSP  V+TPLA+  + + D+ +  +    +NLKGA  L+ +DIA AAL+L SD+ + VSG NL VDGG ++VN+ F  F
Sbjct:   86 AVARFGKLDVMFNNAGVSGPPCFRMSECTKEDFERVLAVNLVGPFLGTKHAARVMAPARRGSIISTASLSSSVSGAASHAYTTSKHALVGFTENAAGELGRHGIRVNCVSPAGVATPLARAAMGMDDEAIEAIMANSANLKGAGALKADDIAAAALFLASDDGRYVSGQNLRVDGGLSVVNSSFGFF 272          
BLAST of DN621004 vs. ExPASy Swiss-Prot
Match: ABA2_ARATH (Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN=ABA2 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.684e-42
Identity = 91/192 (47.40%), Postives = 119/192 (61.98%), Query Frame = -2
Query:  104 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFL---KLADDGLGGM------YSNLKGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGGFAIVNAGFSVF 652
            AV  +G LDI+ NNAG      P+I +   +EFE    +N+ GAFL  KHAARVM P  +GSI+S  SV G++GG   H+Y  SKH +LGL ++ A ELG+ GIRVNCVSPY V+T LA   L   +  +D   G        +NLKG  L  +D+A A L+L SD+S+ +SG NL++DGGF   N  F VF
Sbjct:   93 AVKNFGTLDILINNAGLCGAPCPDIRNYSLSEFEMTFDVNVKGAFLSMKHAARVMIPEKKGSIVSLCSVGGVVGGVGPHSYVGSKHAVLGLTRSVAAELGQHGIRVNCVSPYAVATKLALAHLPEEERTEDAFVGFRNFAAANANLKGVELTVDDVANAVLFLASDDSRYISGDNLMIDGGFTCTNHSFKVF 284          
BLAST of DN621004 vs. ExPASy Swiss-Prot
Match: TS2_MAIZE (Sex determination protein tasselseed-2 OS=Zea mays GN=TS2 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.568e-37
Identity = 89/198 (44.95%), Postives = 113/198 (57.07%), Query Frame = -2
Query:  137 GKLDIMFNNAGTVDE---VKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTP----------------------LAKDFLKLADDGLGGM------YSNLKGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGG 637
            G+LD+  NNAG +        +IL  D AEF+R+L +N +GA LG KHAAR M P   GSI+S ASV  ++GG   HAY +SKH ++GL KN A EL   G+RVNCVSP+ V+TP                      L  D    +D  +  M       + LKG  L P DIAEA L+L SDE++ +SGHNLVVDGG
Sbjct:  129 GRLDVYCNNAGVLGRQTRAARSILSFDAAEFDRVLRVNALGAALGMKHAARAMAPRRAGSIVSVASVAAVLGGLGPHAYTASKHAIVGLTKNAACELRAHGVRVNCVSPFGVATPMLINAWRQGHDDATADADRDLDLDLDVTVPSDQEVEKMEEVVRGLATLKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGG 326          
BLAST of DN621004 vs. ExPASy Swiss-Prot
Match: HSD_MYCTU (3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase OS=Mycobacterium tuberculosis GN=fabG3 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.165e-28
Identity = 74/188 (39.36%), Postives = 105/188 (55.85%), Query Frame = -2
Query:   92 TAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGGFAIVNAGFSVFGKSE 655
            TAVT +G L ++ NNAG ++     I D    E++RIL +NL G FLG +   + MK AGRGSII+ +S+ G+ G  A H Y ++K  + GL K+TA+ELG  GIRVN + P +V TP       + D     ++    G   EP +++   +YL SDES   +G   VVDGG  +     + FG  E
Sbjct:   74 TAVTAFGGLHVLVNNAGILNI--GTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTP-------MTDWVPEDIFQTALGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGG-TVAGLAHNDFGAVE 251          
BLAST of DN621004 vs. ExPASy Swiss-Prot
Match: HSD_MYCBO (3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase OS=Mycobacterium bovis GN=fabG3 PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.165e-28
Identity = 74/188 (39.36%), Postives = 105/188 (55.85%), Query Frame = -2
Query:   92 TAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGGFAIVNAGFSVFGKSE 655
            TAVT +G L ++ NNAG ++     I D    E++RIL +NL G FLG +   + MK AGRGSII+ +S+ G+ G  A H Y ++K  + GL K+TA+ELG  GIRVN + P +V TP       + D     ++    G   EP +++   +YL SDES   +G   VVDGG  +     + FG  E
Sbjct:   74 TAVTAFGGLHVLVNNAGILNI--GTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTP-------MTDWVPEDIFQTALGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGG-TVAGLAHNDFGAVE 251          
BLAST of DN621004 vs. ExPASy Swiss-Prot
Match: LVR_LEIAQ (Levodione reductase OS=Leifsonia aquatica GN=lvr PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.031e-24
Identity = 67/181 (37.02%), Postives = 107/181 (59.12%), Query Frame = -2
Query:  137 TAVTQ-YGKLDIMFNNAGTVDEVKPNILDN-DQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADD------GLGGMYSNLKGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGG 655
            TA T+ +G++D  FNNAG   E K N  ++   AEF++++SINL G FLG +   ++M+  G G +++TASV GI G      YA++KHG++GL +N+AVE GR+GIR+N ++P  + TP+ ++ +K  D           +  N      E  +IA    +L SD++  V+   + +DGG
Sbjct:   84 TATTERFGRIDGFFNNAGI--EGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGG 262          
BLAST of DN621004 vs. ExPASy Swiss-Prot
Match: BACC2_BACSU (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus subtilis GN=bacC PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.031e-24
Identity = 66/180 (36.67%), Postives = 107/180 (59.44%), Query Frame = -2
Query:  134 TAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPL-AKDFLKLADDGLGGMYS-----NLKGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGGF 655
            +AV ++G LD++ NNAG   E+   I + + + + ++L++NL G FL +KHA + M  +G+G+II+T SV G++      AY +SK G+L L ++ AV+  +  IRVNCV P ++ TPL  K FL+  +  L  +       N    + +PE+IA   L+L SD S  ++G  +  DGG+
Sbjct:   73 SAVDKFGGLDVLINNAGI--EIVAPIHEMELSNWNKVLNVNLTGMFLMSKHALKYMLKSGKGNIINTCSVGGVVAWPDIPAYNASKGGVLQLTRSMAVDYAKHNIRVNCVCPGIIDTPLNEKSFLENNEGTLEEIKKEKAKVNPLLRLGKPEEIANVMLFLASDLSSYMTGSAITADGGY 250          
BLAST of DN621004 vs. ExPASy Swiss-Prot
Match: CPNA_COMTE (Cyclopentanol dehydrogenase OS=Comamonas testosteroni GN=cpnA PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.652e-24
Identity = 62/174 (35.63%), Postives = 97/174 (55.75%), Query Frame = -2
Query:  134 TAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGGF 655
            T + +  +LD + NNAG +  +KP + D    E++RI  IN+   FLGT+     M+ A +G I++ +S+ G++G     AY +SK  +    K  AV+L  F IRVN V P V++TP+ +  L         +   L G   +P ++++A L+L SDE+  V G  LVVDGG+
Sbjct:   76 TILAESDRLDALVNNAGILT-LKP-VQDTSNEEWDRIFEINVRSVFLGTRAVIEPMRKAHKGCIVNVSSIYGLVGAPGAAAYEASKGAVRLFTKACAVDLAPFNIRVNSVHPGVIATPMTQQILDAPQSARALLGPTLLGRAAQPMEVSQAVLFLVSDEASFVHGSELVVDGGY 247          
BLAST of DN621004 vs. ExPASy Swiss-Prot
Match: CPNA_COMS9 (Cyclopentanol dehydrogenase OS=Comamonas sp. (strain NCIMB 9872) GN=cpnA PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.652e-24
Identity = 62/174 (35.63%), Postives = 97/174 (55.75%), Query Frame = -2
Query:  134 TAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGGF 655
            T + +  +LD + NNAG +  +KP + D    E++RI  IN+   FLGT+     M+ A +G I++ +S+ G++G     AY +SK  +    K  AV+L  F IRVN V P V++TP+ +  L         +   L G   +P ++++A L+L SDE+  V G  LVVDGG+
Sbjct:   76 TILAESDRLDALVNNAGILT-LKP-VQDTSNEEWDRIFEINVRSVFLGTRAVIEPMRKAHKGCIVNVSSIYGLVGAPGAAAYEASKGAVRLFTKACAVDLAPFNIRVNSVHPGVIATPMTQQILDAPQSARALLGPTLLGRAAQPMEVSQAVLFLVSDEASFVHGSELVVDGGY 247          
BLAST of DN621004 vs. ExPASy Swiss-Prot
Match: BACC_BACSU (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus subtilis GN=bacC PE=3 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 2.652e-24
Identity = 68/180 (37.78%), Postives = 106/180 (58.89%), Query Frame = -2
Query:  134 TAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPL-AKDFLKLADDGLGGMYS-----NLKGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGGF 655
            +AV  +G LD++ NNAG   E+   I + + +++ ++L +NL G FL +KHA + M  AG+G+II+T SV G++      AY +SK G+L L K+ AV+  +  IRVNCV P ++ TPL  K FL+  +  L  +       N    + +PE+IA   L+L SD S  ++G  +  DGG+
Sbjct:   73 SAVHTFGGLDVLINNAGI--EIVAPIHEMELSDWNKVLQVNLTGMFLMSKHALKHMLAAGKGNIINTCSVGGLVAWPDIPAYNASKGGVLQLTKSMAVDYAKHQIRVNCVCPGIIDTPLNEKSFLENNEGTLEEIKKEKAKVNPLLRLGKPEEIANVMLFLASDLSSYMTGSAITADGGY 250          
The following BLAST results are available for this feature:
BLAST of DN621004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 177
Match NameE-valueIdentityDescription
MOMAS_ORYSJ1.182e-4854.55Momilactone A synthase OS=Oryza sativa subsp. japo... [more]
ABA2_ARATH3.684e-4247.40Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN... [more]
TS2_MAIZE3.568e-3744.95Sex determination protein tasselseed-2 OS=Zea mays... [more]
HSD_MYCTU5.165e-2839.363-alpha-(or 20-beta)-hydroxysteroid dehydrogenase ... [more]
HSD_MYCBO5.165e-2839.363-alpha-(or 20-beta)-hydroxysteroid dehydrogenase ... [more]
LVR_LEIAQ2.031e-2437.02Levodione reductase OS=Leifsonia aquatica GN=lvr P... [more]
BACC2_BACSU2.031e-2436.67Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]
CPNA_COMTE2.652e-2435.63Cyclopentanol dehydrogenase OS=Comamonas testoster... [more]
CPNA_COMS92.652e-2435.63Cyclopentanol dehydrogenase OS=Comamonas sp. (stra... [more]
BACC_BACSU2.652e-2437.78Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06B20_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006B20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621004 ID=DN621004; Name=DN621004; organism=Citrus sinensis; type=EST; length=656bp
TTTTTTTTTTTTCATAGTAAAAAGCAGTAAAATCGAAGCTCAATTACGAA
TTATTAGGATCAAAACATGCAAGCTTCCGAAAATACACTCATTCAGATTT
CCCAAACACAGAAAACCCTGCATTGACAATAGCAAATCCTCCATCTACGA
CCAAATTATGCCCACTCACACACTTAGACTCATCACTCCCCAAATAAAGA
GCAGCTTCAGCTATATCCTCAGGCTCAAGAACAGCCCCCTTAAGATTTGA
ATACATGCCGCCCAAACCATCATCAGCAAGCTTGAGAAAATCCTTAGCTA
ATGGAGTTGAGACCACATAAGGTGACACACAATTGACCCTAATGCCAAAT
CGTCCAAGCTCCACAGCAGTATTCTTCATCAGCCCCAAAAGGCCATGCTT
TGAACTAGCGTATGCATGTGTTGCAGCGCCACCAATGATTCCGCAAACGC
TCGCAGTTGAAATTATGCTGCCTCGTCCGGCGGGTTTCATCACCCTAGCA
GCATGTTTCGTCCCCAAAAATGCGCCAACGAGGTTAATGGAAAGTATGCG
CTCAAATTCAGCCTGATCGTTATCGAGTATGTTAGGTTTGACTTCATCCA
CAGTGCCGGCGTTATTGAACATAATGTCTAGCTTTCCGTACTGAGTGACT
GCCGTG
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