DN621002

Overview
NameDN621002
Unique NameDN621002
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length651
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621002 vs. ExPASy Swiss-Prot
Match: ALA2_PANMI (Alanine aminotransferase 2 OS=Panicum miliaceum PE=1 SV=1)

HSP 1 Score: 331.257 bits (848), Expect = 2.756e-90
Identity = 160/193 (82.90%), Postives = 174/193 (90.16%), Query Frame = 1
Query:   73 VDSLNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGW 651
            V++LNPKVLKCEYAVRGEIV  AQ LQQ+LQT PGS  FDEILYCNIGNPQSLGQQP+TFFREVLALCDHP +L++ ET+ LFSAD+I RA QIL  IPGRATGAYSHSQGIKGLRD IAAGI +RDGFPA+ +DIF+TDGASP VHMMMQLLIR+E DGILCPIPQYPLYSASIALHGGTLVPYYLDE TGW
Sbjct:    7 VENLNPKVLKCEYAVRGEIVIHAQHLQQQLQTQPGSLPFDEILYCNIGNPQSLGQQPVTFFREVLALCDHPCLLEKEETKSLFSADAISRAKQILSTIPGRATGAYSHSQGIKGLRDAIAAGIASRDGFPANADDIFVTDGASPGVHMMMQLLIRNEKDGILCPIPQYPLYSASIALHGGTLVPYYLDEKTGW 199          
BLAST of DN621002 vs. ExPASy Swiss-Prot
Match: ALA2_HORVU (Alanine aminotransferase 2 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 322.398 bits (825), Expect = 1.280e-87
Identity = 157/193 (81.35%), Postives = 172/193 (89.12%), Query Frame = 1
Query:   73 VDSLNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGW 651
            VD+LNPKVLKCEYAVRGEIV  AQRLQ++L+T PGS  FDEILYCNIGNPQSLGQQP+TFFREVLALCDHP +L R E + LFSADSI RA QIL  IPGRATGAYSHSQGIKGLRD IA+GI +RDGFPA+ +DIFLTDGASP VH+MMQLLIR+E DGIL PIPQYPLYSASIALHGG LVPYYL+E+TGW
Sbjct:    7 VDNLNPKVLKCEYAVRGEIVIHAQRLQEQLKTQPGSLPFDEILYCNIGNPQSLGQQPVTFFREVLALCDHPDLLQREEIKTLFSADSISRAKQILAMIPGRATGAYSHSQGIKGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSASIALHGGALVPYYLNESTGW 199          
BLAST of DN621002 vs. ExPASy Swiss-Prot
Match: ALAT_SCHPO (Putative alanine aminotransferase OS=Schizosaccharomyces pombe GN=SPBC582.08 PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 4.166e-46
Identity = 93/196 (47.45%), Postives = 127/196 (64.80%), Query Frame = 1
Query:   73 VDSLNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSET---QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGW 651
            ++SLN +V K  YAVRG +  +A  +Q +L  NP S+ F EI+Y NIGNPQ +GQ PITF R+VL+LC +P++LD +E    Q LF  D ++R+  +L +    + GAYS SQGI  +R  +A  I ARDGF  +P+DI+LT GAS A  ++M L+I    DG++ P PQYPLY A I L  G++V Y L E   W
Sbjct:   30 LNSLNQQVFKANYAVRGALAILADEIQDDLLENPSSYPFSEIVYANIGNPQQMGQSPITFVRQVLSLCQYPTLLDHAEEKWFQNLFPTDVVQRSKMLLKE--SGSLGAYSASQGIPLVRRHVADFIRARDGFDCEPSDIYLTSGASHAARLIMTLIIARPTDGVMVPAPQYPLYGAQIDLMSGSMVSYSLSEENNW 223          
BLAST of DN621002 vs. ExPASy Swiss-Prot
Match: ALAT_YEAST (Probable alanine aminotransferase OS=Saccharomyces cerevisiae GN=ALT2 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.700e-45
Identity = 97/195 (49.74%), Postives = 130/195 (66.67%), Query Frame = 1
Query:   82 LNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSIL----DRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARD-GFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGW 651
            LN  V K EYAVRG I + A  L++EL+ NP    FD+I+  NIGNPQ L Q+P+TF R+VLA+ ++P IL    +   +  LFS D++ERA ++L+ I G + GAYSHSQG+ G+R T+A  I  RD G PA P DI+LT GAS A   ++ LL +    G+L PIPQYPLY+AS +L    ++PYYLDE + W
Sbjct:   31 LNTGVTKAEYAVRGAIPTRADELKEELKKNPEVLPFDDIINANIGNPQQLDQKPLTFTRQVLAILEYPEILRVGHNELASLNLFSRDALERAERLLNDI-GGSIGAYSHSQGVPGIRQTVADFITRRDGGEPATPEDIYLTTGASSAATSLLSLLCKDSQTGLLIPIPQYPLYTASASLFNAQVLPYYLDEESNW 224          
BLAST of DN621002 vs. ExPASy Swiss-Prot
Match: ALAM_DICDI (Probable alanine aminotransferase, mitochondrial OS=Dictyostelium discoideum GN=gpt PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.026e-44
Identity = 93/197 (47.21%), Postives = 135/197 (68.53%), Query Frame = 1
Query:   73 VDSLNPKVLKCEYAVRGEIV----SIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGW 651
            +D++   V   +YAVRGE+V    +I+ +LQ++      +  F+EI+YCNIGNPQ L Q+P+T+FR+V++L + P +LD    + ++ AD I RA +IL  I    TGAYS+SQGI  +  ++A  IE RDG  +DP++IFLTDGAS  V  +++LLI+  +DGIL PIPQYPLYSA+I L+ G+ + Y L+E  GW
Sbjct:   56 IDNICQNVRNAQYAVRGELVIRAEAISHQLQKQKTEGTKTLPFEEIVYCNIGNPQQLKQKPLTYFRQVVSLVECPDLLDNPYVEKIYPADVISRAKEILGSI-NNTTGAYSNSQGIGLVLRSVADFIERRDGHKSDPSEIFLTDGASVGVQRILKLLIKDRSDGILIPIPQYPLYSATIELYNGSQLGYLLNEEKGW 251          
BLAST of DN621002 vs. ExPASy Swiss-Prot
Match: ALAM_YEAST (Probable alanine aminotransferase, mitochondrial OS=Saccharomyces cerevisiae GN=ALT1 PE=1 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 8.686e-44
Identity = 91/198 (45.96%), Postives = 135/198 (68.18%), Query Frame = 1
Query:   73 VDSLNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQ----GLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARD-GFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGW 651
            ++ +N  VLK +YAVRG I   A+ L+ +L+ +P S  FD I+  NIGNPQ L Q+P+T++R+VL+L  +P +L+++E Q     LF  D+I+RA  +++ I G + GAYS SQG++G+R ++A  I  RD G  + P DIFLT GAS AV+ ++ +  R    G+L PIPQYPLY+A++AL+    +PYYLDE +GW
Sbjct:  113 LEDVNENVLKAKYAVRGAIPMRAEELKAQLEKDPQSLPFDRIINANIGNPQQLQQKPLTYYRQVLSLLQYPELLNQNEQQLVDSKLFKLDAIKRAKSLMEDI-GGSVGAYSSSQGVEGIRKSVAEFITKRDEGEISYPEDIFLTAGASAAVNYLLSIFCRGPETGVLIPIPQYPLYTATLALNNSQALPYYLDENSGW 309          
BLAST of DN621002 vs. ExPASy Swiss-Prot
Match: ALAT1_RAT (Alanine aminotransferase 1 OS=Rattus norvegicus GN=Gpt PE=1 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 1.811e-41
Identity = 95/197 (48.22%), Postives = 128/197 (64.97%), Query Frame = 1
Query:   73 VDSLNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARD-GFPADPNDIFLTDGASPAVHMMMQLLIRSE---NDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGW 651
            +D++NP V + EYAVRG IV  A  L+QEL+       F E++  NIG+ Q++GQ+PITFFR+VLALC +P++L   +    F  D+  RA +IL    G + GAYS S GI+ +R+ +A  IE RD G PADPN+IFL+ GAS A+  M++LL+  E     G+L PIPQYPLYSA++A      V YYLDE   W
Sbjct:   23 LDTMNPCVRRVEYAVRGPIVQRALELEQELRQGV-KKPFTEVIRANIGDAQAMGQRPITFFRQVLALCVYPNLLSSPD----FPEDAKRRAERILQACGGHSLGAYSISSGIQPIREDVAQYIERRDGGIPADPNNIFLSTGASDAIVTMLKLLVSGEGRARTGVLIPIPQYPLYSAALAELDAVQVDYYLDEERAW 214          
BLAST of DN621002 vs. ExPASy Swiss-Prot
Match: ALAT1_MOUSE (Alanine aminotransferase 1 OS=Mus musculus GN=Gpt PE=2 SV=3)

HSP 1 Score: 169.088 bits (427), Expect = 1.811e-41
Identity = 95/197 (48.22%), Postives = 128/197 (64.97%), Query Frame = 1
Query:   73 VDSLNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARD-GFPADPNDIFLTDGASPAVHMMMQLLIRSE---NDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGW 651
            +D++NP V + EYAVRG IV  A  L+QEL+       F E++  NIG+ Q++GQ+PITFFR+VLALC +P++L   +    F  D+  RA +IL    G + GAYS S GI+ +R+ +A  IE RD G PADPN+IFL+ GAS A+  M++LL+  E     G+L PIPQYPLYSA++A      V YYLDE   W
Sbjct:   23 LDTMNPCVRRVEYAVRGPIVQRALELEQELRQGV-KKPFTEVIRANIGDAQAMGQRPITFFRQVLALCVYPNLLSSPD----FPEDAKRRAERILQACGGHSLGAYSISSGIQPIREDVAQYIERRDGGIPADPNNIFLSTGASDAIVTMLKLLVAGEGRARTGVLIPIPQYPLYSAALAELDAVQVDYYLDEERAW 214          
BLAST of DN621002 vs. ExPASy Swiss-Prot
Match: ALAT1_HUMAN (Alanine aminotransferase 1 OS=Homo sapiens GN=GPT PE=1 SV=3)

HSP 1 Score: 166.777 bits (421), Expect = 8.988e-41
Identity = 93/197 (47.21%), Postives = 127/197 (64.47%), Query Frame = 1
Query:   73 VDSLNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARD-GFPADPNDIFLTDGASPAVHMMMQLLIRSE---NDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGW 651
            +D +NP+V + EYAVRG IV  A  L+QEL+       F E++  NIG+ Q++GQ+PITF R+VLALC +P +L        F  D+ +RA +IL    G + GAYS S GI+ +R+ +A  IE RD G PADPN++FL+ GAS A+  +++LL+  E     G+L PIPQYPLYSA++A  G   V YYLDE   W
Sbjct:   23 LDGMNPRVRRVEYAVRGPIVQRALELEQELRQGV-KKPFTEVIRANIGDAQAMGQRPITFLRQVLALCVNPDLLSSPN----FPDDAKKRAERILQACGGHSLGAYSVSSGIQLIREDVARYIERRDGGIPADPNNVFLSTGASDAIVTVLKLLVAGEGHTRTGVLIPIPQYPLYSATLAELGAVQVDYYLDEERAW 214          
BLAST of DN621002 vs. ExPASy Swiss-Prot
Match: ALAT1_BOVIN (Alanine aminotransferase 1 OS=Bos taurus GN=GPT PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.002e-40
Identity = 94/197 (47.72%), Postives = 126/197 (63.96%), Query Frame = 1
Query:   73 VDSLNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARD-GFPADPNDIFLTDGASPAVHMMMQLLIRSE---NDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGW 651
            +DS+NP V + EYAVRG IV  A  L+QEL+       F E++  NIG+ Q++GQ PITF R+VLALC HP +L+  +    F  D+  RA +IL    G + GAYS S G++ +R+ +A  IE RD G PADPN+IFL+ GAS A+  +++LL+  E     G+L PIPQYPLYSA++A      V YYLDE   W
Sbjct:   23 LDSMNPYVRRVEYAVRGPIVQRALELEQELRQGV-KKPFTEVIRANIGDAQAMGQIPITFPRQVLALCVHPDLLNSPD----FPDDAKRRAERILQACGGHSLGAYSISAGVQMIREDVARYIERRDGGIPADPNNIFLSTGASDAIVTVLKLLVTGEGRTRTGVLIPIPQYPLYSAALAEFNAVQVDYYLDEERAW 214          
The following BLAST results are available for this feature:
BLAST of DN621002 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
ALA2_PANMI2.756e-9082.90Alanine aminotransferase 2 OS=Panicum miliaceum PE... [more]
ALA2_HORVU1.280e-8781.35Alanine aminotransferase 2 OS=Hordeum vulgare PE=2... [more]
ALAT_SCHPO4.166e-4647.45Putative alanine aminotransferase OS=Schizosacchar... [more]
ALAT_YEAST2.700e-4549.74Probable alanine aminotransferase OS=Saccharomyces... [more]
ALAM_DICDI1.026e-4447.21Probable alanine aminotransferase, mitochondrial O... [more]
ALAM_YEAST8.686e-4445.96Probable alanine aminotransferase, mitochondrial O... [more]
ALAT1_RAT1.811e-4148.22Alanine aminotransferase 1 OS=Rattus norvegicus GN... [more]
ALAT1_MOUSE1.811e-4148.22Alanine aminotransferase 1 OS=Mus musculus GN=Gpt ... [more]
ALAT1_HUMAN8.988e-4147.21Alanine aminotransferase 1 OS=Homo sapiens GN=GPT ... [more]
ALAT1_BOVIN2.002e-4047.72Alanine aminotransferase 1 OS=Bos taurus GN=GPT PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06B19_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006B19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621002 ID=DN621002; Name=DN621002; organism=Citrus sinensis; type=EST; length=651bp
TTGTCATCCACTTCTGTGATTGATTCCCCTTCTTCTTCTTCAATGGCTCC
CACCTCTTCTCCTGCTATCACGGTCGATTCCCTTAACCCCAAGGTTCTAA
AATGCGAGTATGCTGTTCGTGGTGAGATTGTCTCCATTGCCCAGCGGTTG
CAACAAGAGTTACAAACTAACCCTGGCTCTCATTCCTTTGATGAGATACT
GTACTGCAACATTGGAAATCCTCAGTCTCTTGGTCAGCAGCCAATAACCT
TTTTCCGAGAGGTTCTTGCATTATGTGACCATCCATCCATTTTGGACAGA
AGTGAAACACAAGGTTTGTTCAGTGCGGATTCTATAGAGCGAGCTTGGCA
GATACTGGATCAAATTCCTGGGCGAGCAACTGGGGCTTACAGTCATAGTC
AGGGTATCAAGGGACTGCGTGATACAATCGCTGCTGGAATTGAGGCTCGT
GATGGTTTTCCTGCTGATCCAAATGATATTTTCTTGACAGATGGTGCAAG
TCCTGCTGTCCACATGATGATGCAGTTATTGATAAGATCAGAGAACGATG
GAATTCTCTGTCCTATTCCTCAGTACCCTTTATACTCTGCTTCAATTGCT
CTCCATGGTGGGACCTTGGTGCCTTACTACCTAGATGAAGCAACAGGATG
G
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