DN621001

Overview
NameDN621001
Unique NameDN621001
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length736
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621001 vs. ExPASy Swiss-Prot
Match: ALA2_PANMI (Alanine aminotransferase 2 OS=Panicum miliaceum PE=1 SV=1)

HSP 1 Score: 318.546 bits (815), Expect = 2.287e-86
Identity = 153/202 (75.74%), Postives = 172/202 (85.15%), Query Frame = -1
Query:  131 SMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPXXXXXXXXXXKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNFMDKFRN 736
            S+GYGE D+ LVSFQSVSKGYYGECGKRGGYME+TGFSA VREQIYK+ASVNLCSNI+GQILASLVM+PPKVGDESY +Y AE+DGIL SLARRAK LEDAFN+LEGI+CNKAEGAMYLFP+I LP             PDAFY  RLL +TGIV+VPGSGFGQVPGTWH RCTILPQEDKIPA++TR   FH+ FM ++R+
Sbjct:  281 SVGYGEDDLPLVSFQSVSKGYYGECGKRGGYMEITGFSAPVREQIYKIASVNLCSNITGQILASLVMNPPKVGDESYAAYKAEKDGILQSLARRAKALEDAFNNLEGISCNKAEGAMYLFPQIHLPKKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHIRCTILPQEDKIPAVITRFKAFHEAFMAEYRD 482          
BLAST of DN621001 vs. ExPASy Swiss-Prot
Match: ALA2_HORVU (Alanine aminotransferase 2 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 312.383 bits (799), Expect = 1.639e-84
Identity = 149/202 (73.76%), Postives = 171/202 (84.65%), Query Frame = -1
Query:  131 SMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPXXXXXXXXXXKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNFMDKFRN 736
            S+GYGE+D+ LVS+QSVSKGYYGECGKRGGY E+TGFSA VREQIYK+ASVNLCSNI+GQILASLVM+PPK  DESY SY AE+DGIL+SLARRAK LE AFN LEGITCN+AEGAMY+FP+I LP             PDAFY  RLL +TGIV+VPGSGFGQVPGTWHFRCTILPQEDKIPA+++R T FH+ FM ++R+
Sbjct:  281 SLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQIYKIASVNLCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKLEGITCNEAEGAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTILPQEDKIPAVISRFTVFHEAFMSEYRD 482          
BLAST of DN621001 vs. ExPASy Swiss-Prot
Match: ALAM_DICDI (Probable alanine aminotransferase, mitochondrial OS=Dictyostelium discoideum GN=gpt PE=3 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.397e-59
Identity = 104/200 (52.00%), Postives = 141/200 (70.50%), Query Frame = -1
Query:  134 MGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPXXXXXXXXXXKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNFMDKFR 733
            MG    D+ +VSF SVSKG+ GECGKRGGYME+ G + +V+ +IYK+AS+ LC N+ GQ++  L++ PP  G++S++ Y  ERD I  SL +RA  L +A N+LEG+TCN +EGAMY FP+I+LP             PDA+YC +LL ATGI +VPGSGFGQ  GTWHFR T LP E+ I  +  R+ DFH++FM+K++
Sbjct:  335 MGGDYADLEMVSFHSVSKGFVGECGKRGGYMELNGVTQDVKAEIYKLASIGLCPNVIGQLVVDLMVRPPVAGEQSHDLYLKERDNIYESLKKRANLLTNALNNLEGVTCNPSEGAMYAFPQIRLPAKAVEYANSIGKAPDAYYCIQLLEATGICVVPGSGFGQKDGTWHFRTTFLPSEEAIEGVCKRIADFHQSFMNKYK 534          
BLAST of DN621001 vs. ExPASy Swiss-Prot
Match: ALAT2_HUMAN (Alanine aminotransferase 2 OS=Homo sapiens GN=GPT2 PE=1 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 8.209e-52
Identity = 93/193 (48.19%), Postives = 128/193 (66.32%), Query Frame = -1
Query:  137 DISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPXXXXXXXXXXKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNFMDKF 715
            ++ L SF S SKGY GECG RGGYMEV     E++ Q+ K+ SV LC  +SGQ    +V++PP  G+ES+E +  E++ +L +LA++AK  ED FN + GI CN  +GAMY FPRI +P          +  PD FYC +LL  TGI +VPGSGFGQ  GT+HFR TILP  +K+  ++ ++ DFH NF++K+
Sbjct:  330 NVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQLVKLLSVRLCPPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPGIHCNPLQGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTILPPVEKLKTVLQKVKDFHINFLEKY 522          
BLAST of DN621001 vs. ExPASy Swiss-Prot
Match: ALAT2_MOUSE (Alanine aminotransferase 2 OS=Mus musculus GN=Gpt2 PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 4.074e-51
Identity = 93/193 (48.19%), Postives = 128/193 (66.32%), Query Frame = -1
Query:  137 DISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPXXXXXXXXXXKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNFMDKF 715
            ++ L SF S SKGY GECG RGGYMEV     E++ Q+ K+ SV LC  +SGQ    +V++PP+ G+ES+E +  E++ +L +LA++AK  ED FN + GI CN  +GAMY FPRI +P          K  PD FYC +LL  TGI +VPGSGFGQ  GT+HFR TILP  DK+  ++ ++ DFH  F++++
Sbjct:  329 NVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQLVKLLSVRLCPPVSGQAAMDIVVNPPEPGEESFEQFSREKEFVLGNLAKKAKLTEDLFNQVPGIQCNPLQGAMYAFPRILIPAKAVEAAQSHKMAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTILPPVDKLKTVLHKVKDFHLKFLEQY 521          
BLAST of DN621001 vs. ExPASy Swiss-Prot
Match: ALAT2_XENLA (Alanine aminotransferase 2 OS=Xenopus laevis GN=gpt2 PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.185e-50
Identity = 91/192 (47.40%), Postives = 125/192 (65.10%), Query Frame = -1
Query:  137 ISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPXXXXXXXXXXKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNFMDKF 712
            + L SF S SKGY GECG RGGYMEV      V++Q+ K+ SV LC  + GQ+L  ++++PPK G+ SY+ + +E+  +L++LA +A+  E+  N   GI CN  +GAMY FPRI +P             PD F+C +LL  TGI +VPGSGFGQ  GT HFR TILP  DK+ +++ RL DFH+ FMD++
Sbjct:  348 LELASFHSTSKGYMGECGFRGGYMEVINMDPAVKQQLTKLVSVRLCPPVPGQVLLDVIVNPPKPGEPSYKQFISEKQAVLNNLAEKARLTEEILNQAPGIRCNPVQGAMYSFPRIHIPEKAIKLAQAEGQAPDMFFCMKLLEETGICVVPGSGFGQREGTHHFRMTILPPTDKLKSLLERLKDFHQKFMDEY 539          
BLAST of DN621001 vs. ExPASy Swiss-Prot
Match: ALAT2_DANRE (Alanine aminotransferase 2-like OS=Danio rerio GN=gpt2l PE=2 SV=2)

HSP 1 Score: 197.593 bits (501), Expect = 5.883e-50
Identity = 95/194 (48.97%), Postives = 124/194 (63.92%), Query Frame = -1
Query:  137 KDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPXXXXXXXXXXKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNFMDKF 718
            K + L SF S SK Y GECG RGGYMEV    A+V+ Q+ K+ SV LC    GQ L  LV++PP+ G+ S++++  ER  +LS+LA +AK  E   N++ GI+CN  +GAMY FPRI LP             PD FYC +LL  TGI LVPGSGFGQ  GT+HFR TILP  DK+  ++ +L DFH+ F  ++
Sbjct:  355 KKVELASFHSTSKCYMGECGFRGGYMEVINMDADVKAQLTKLVSVRLCPPAPGQALMDLVVNPPQPGEPSHQTFMQERTAVLSALAEKAKLTEQILNTVPGISCNPVQGAMYSFPRITLPERAISEAKAKGQAPDMFYCMKLLEETGICLVPGSGFGQREGTYHFRMTILPPTDKLKLMLNKLKDFHQRFTQQY 548          
BLAST of DN621001 vs. ExPASy Swiss-Prot
Match: ALAM_YEAST (Probable alanine aminotransferase, mitochondrial OS=Saccharomyces cerevisiae GN=ALT1 PE=1 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.311e-49
Identity = 99/197 (50.25%), Postives = 129/197 (65.48%), Query Frame = -1
Query:  131 DISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPXXXXXXXXXXKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAI--VTRLTDFHKNFMDKFRN 715
            ++ L S  S SKG  GECG+RGGYME+TGFS E+R+ I K+AS++LC  ++GQ L  L++ PP  G+ES+ES  AER+ I   L  RA TL + FNSLEGI C K +GAMYLFP+I LP          +  PD FYC++LL +TGI  VPGSGFGQ PGT+H R T L      P +  + +   FHK F D++R+
Sbjct:  401 NVQLASLHSTSKGVSGECGQRGGYMELTGFSHEMRQVILKLASISLCPVVTGQALVDLMVRPPVEGEESFESDQAERNSIHEKLITRAMTLYETFNSLEGIECQKPQGAMYLFPKIDLPFKAVQEARHLELTPDEFYCKKLLESTGICTVPGSGFGQEPGTYHLRTTFL-----APGLEWIKKWESFHKEFFDQYRD 592          
BLAST of DN621001 vs. ExPASy Swiss-Prot
Match: ALAT2_XENTR (Alanine aminotransferase 2 OS=Xenopus tropicalis GN=gpt2 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.920e-49
Identity = 90/192 (46.88%), Postives = 122/192 (63.54%), Query Frame = -1
Query:  137 ISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPXXXXXXXXXXKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNFMDKF 712
            + L SF S SKGY GECG RGGYMEV      V++Q+ K+ SV LC  + GQ L  ++++PPK G+ SY+ + AE+  +L +LA +A+  E+  N   GI CN  +GAMY FPRI +P             PD F+C +LL  TGI +VPGSGFGQ  GT HFR TILP  DK+ +++ RL DFH+ F +++
Sbjct:  332 VELASFHSTSKGYMGECGFRGGYMEVINMDPAVKQQLTKLVSVRLCPPVPGQALLDVIVNPPKPGEPSYKQFMAEKQAVLGNLAEKARLTEEILNQSPGIRCNPVQGAMYSFPRIHIPEKAIKLAQAEGQAPDMFFCMKLLEETGICVVPGSGFGQREGTHHFRMTILPPTDKLKSLLERLKDFHQKFTEEY 523          
BLAST of DN621001 vs. ExPASy Swiss-Prot
Match: ALAT1_BOVIN (Alanine aminotransferase 1 OS=Bos taurus GN=GPT PE=1 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.092e-47
Identity = 91/190 (47.89%), Postives = 118/190 (62.11%), Query Frame = -1
Query:  137 LVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPXXXXXXXXXXKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNFMDKF 706
            L SF S+SKGY GECG RGGY+EV    A V++Q+ K+ SV LC    GQ+L  + +SPP   D S+  + AER  +L+ LA +AK  E  FN   GI CN  +GAMY FPR+QLP             PD F+C RLL  TGI +VPGSGFGQ  GT+HFR TILP  +K+  ++ +L+ FH  F  ++
Sbjct:  306 LASFHSISKGYMGECGFRGGYVEVVNMDAAVKQQMQKLRSVRLCPPTPGQVLLDVAVSPPAPSDPSFPRFQAERRAVLAELAAKAKLTEQVFNEAPGIRCNPVQGAMYSFPRVQLPPRAVQRAQELGLAPDMFFCLRLLEETGICVVPGSGFGQREGTYHFRMTILPPMEKLRPLLEKLSQFHAKFTREY 495          
The following BLAST results are available for this feature:
BLAST of DN621001 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
ALA2_PANMI2.287e-8675.74Alanine aminotransferase 2 OS=Panicum miliaceum PE... [more]
ALA2_HORVU1.639e-8473.76Alanine aminotransferase 2 OS=Hordeum vulgare PE=2... [more]
ALAM_DICDI1.397e-5952.00Probable alanine aminotransferase, mitochondrial O... [more]
ALAT2_HUMAN8.209e-5248.19Alanine aminotransferase 2 OS=Homo sapiens GN=GPT2... [more]
ALAT2_MOUSE4.074e-5148.19Alanine aminotransferase 2 OS=Mus musculus GN=Gpt2... [more]
ALAT2_XENLA1.185e-5047.40Alanine aminotransferase 2 OS=Xenopus laevis GN=gp... [more]
ALAT2_DANRE5.883e-5048.97Alanine aminotransferase 2-like OS=Danio rerio GN=... [more]
ALAM_YEAST1.311e-4950.25Probable alanine aminotransferase, mitochondrial O... [more]
ALAT2_XENTR2.920e-4946.88Alanine aminotransferase 2 OS=Xenopus tropicalis G... [more]
ALAT1_BOVIN2.092e-4747.89Alanine aminotransferase 1 OS=Bos taurus GN=GPT PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06B19_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006B19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621001 ID=DN621001; Name=DN621001; organism=Citrus sinensis; type=EST; length=736bp
TTTTTTTTTTTTTTTTTAGGAAAAAAGTACGCTTTGTCCATTCACTCTGT
AAACGTTTAACAATTGAAATGAATGGCTACACATTATTTTTCTGAACTCA
GTCTCATATTATTATGCAGAAGATCTTTCAATTACGGAATTTGTCCATGA
AATTTTTATGGAAGTCTGTCAGCCGGGTCACAATCGCTGGAATCTTGTCC
TCTTGAGGCAATATGGTGCACCTAAAATGCCAAGTGCCGGGGACCTGCCC
AAAACCAGAACCAGGAACAAGAACAATTCCAGTGGCATTGAGAAGGCGGC
GACAATAAAATGCATCTGGAACAGTTTTTTCAGCTTCAGCAGCTTTAATT
GCCTTTTCAGGCAGTTGAATACGAGGAAAGAGATACATTGCTCCTTCAGC
CTTGTTACATGTTATTCCTTCCAAACTGTTAAATGCATCTTCCAATGTCT
TTGCACGCCTGGCTAAAGATGAGAGGATTCCATCCCTCTCAGCGCAATAG
GACTCATAAGATTCATCTCCAACCTTAGGTGGACTCATGACAAGGCTTGC
CAGAATTTGGCCGGAGATATTAGAACAAAGATTCACAGATGCCACTTTGT
ATATTTGCTCCCTTACTTCAGCACTGAACCCAGTGACCTCCATGTAACCT
CCTCTTTTTCCACACTCCCCATAGTAACCTTTAGAAACTGACTGAAATGA
TACAAGGGATATATCCTTCTCACCATACCCCATGGA
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