DN620998
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN620998 vs. ExPASy Swiss-Prot
Match: GI1L3_ARATH (Probable gibberellin receptor GID1L3 OS=Arabidopsis thaliana GN=GID1L3 PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.920e-28 Identity = 83/235 (35.32%), Postives = 115/235 (48.94%), Query Frame = 3 Query: 36 DGTITRE-PDVLPR-TPAKPDPNDNTIALSKDFTVNESKNIWVRIFLPHQALXXXXXXXXXXXAK---LPLIIHFHGGGFVFISAATSTNHEYCQLIAAQIPAVVVTAEYRLAPEHRLPAAYDDGMEVLHWLKTSQDGWLQQYADFS-SCFLTGDSAGGNLAYRVGLRASAIVDDLLPLTIKGLILIKPYFSGVKRTESELRLEKDPDFPLALNDTMWELALPLGADRDHEYCNP 722 DGT R + L R PA +P + + D ++ N+ R++ P A +P+I+ FHGG F SA ++ C+ + AVVV+ YR APE+R P AYDDG VL W+ +S WL+ D FL GDS+GGN+ + V +RA D+L G IL+ P F G +RTESE RL+ + D W LP G DR+H C+P Sbjct: 38 DGTFNRHLAEFLDRKVPANANPVNGVFSF--DVIIDRQTNLLSRVYRPADAGTSPSITDLQNPVDGEIVPVIVFFHGGSFAHSSANSAIYDTLCRRLVGLCGAVVVSVNYRRAPENRYPCAYDDGWAVLKWVNSS--SWLRSKKDSKVRIFLAGDSSGGNIVHNVAVRAVESRIDVL-----GNILLNPMFGGTERTESEKRLDGKYFVTVRDRDWYWRAFLPEGEDREHPACSP 263
BLAST of DN620998 vs. ExPASy Swiss-Prot
Match: GI1L2_ARATH (Probable gibberellin receptor GID1L2 OS=Arabidopsis thaliana GN=GID1L2 PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.393e-28 Identity = 82/238 (34.45%), Postives = 117/238 (49.16%), Query Frame = 3 Query: 36 DGTITRE-PDVLPR-TPAKPDPNDNTIALSKDFTVNESKNIWVRIFLPHQALXXXXXXXXXXXAKL------PLIIHFHGGGFVFISAATSTNHEYCQLIAAQIPAVVVTAEYRLAPEHRLPAAYDDGMEVLHWLKTSQDGWLQQYADFS-SCFLTGDSAGGNLAYRVGLRASAIVDDLLPLTIKGLILIKPYFSGVKRTESELRLEKDPDFPLALNDTMWELALPLGADRDHEYCNP 722 DG+ R+ + L R PA P D + V+ + N+ RI+ P L L P++I FHGG F SA ++ +C+ + VVV+ +YR +PEHR P AYDDG L+W+K+ WLQ D + +L GDS+GGN+A+ V +RA+ + + G IL+ P F G +RT+SE L+ + D W LP G DRDH CNP Sbjct: 38 DGSFNRDLAEFLDRKVPANSFPLDGVFSFDH---VDSTTNLLTRIYQPASLLHQTRHGTLELTKPLSTTEIVPVLIFFHGGSFTHSSANSAIYDTFCRRLVTICGVVVVSVDYRRSPEHRYPCAYDDGWNALNWVKSRV--WLQSGKDSNVYVYLAGDSSGGNIAHNVAVRATN-----EGVKVLGNILLHPMFGGQERTQSEKTLDGKYFVTIQDRDWYWRAYLPEGEDRDHPACNP 265
BLAST of DN620998 vs. ExPASy Swiss-Prot
Match: GID1_ORYSJ (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.605e-26 Identity = 69/166 (41.57%), Postives = 94/166 (56.63%), Query Frame = 3 Query: 228 PLIIHFHGGGFVFISAATSTNHEYCQLIAAQIPAVVVTAEYRLAPEHRLPAAYDDGMEVLHWLKTSQDGWLQQYADFSS-CFLTGDSAGGNLAYRVGLRASAIVDDLLPLTIKGLILIKPYFSGVKRTESELRLEKDPDFPLALNDTMWELALPLGADRDHEYCNP 722 P+II FHGG FV SA+++ C+ VVV+ YR APEHR P AYDDG L W+ + +++ D + FL+GDS+GGN+A+ V +RA+ D+ + + G IL+ F G +RTESE RL+ L D W+ LP ADRDH CNP Sbjct: 114 PVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMSQP--FMRSGGDAQARVFLSGDSSGGNIAHHVAVRAA---DE--GVKVCGNILLNAMFGGTERTESERRLDGKYFVTLQDRDWYWKAYLPEDADRDHPACNP 272
BLAST of DN620998 vs. ExPASy Swiss-Prot
Match: GI1L1_ARATH (Probable gibberellin receptor GID1L1 OS=Arabidopsis thaliana GN=GID1L1 PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.026e-25 Identity = 85/251 (33.86%), Postives = 117/251 (46.61%), Query Frame = 3 Query: 6 MENFLVRINA----DGTITRE-PDVLPR-TPAKPDPNDNTIALSKDFTVNESKNIWVRIFLP-----HQALXXXXXXXXXXXAKLPLIIHFHGGGFVFISAATSTNHEYCQLIAAQIPAVVVTAEYRLAPEHRLPAAYDDGMEVLHWLKTSQDGWLQQYADFS-SCFLTGDSAGGNLAYRVGLRASAIVDDLLPLTIKGLILIKPYFSGVKRTESELRLEKDPDFPLALNDTMWELALPLGADRDHEYCNP 722 + NF V N DGT R + L R A +P D + D ++ N+ R++ P Q +P+I+ FHGG F SA ++ C+ + VVV+ YR APE+ P AYDDG L+W+ + WL+ D FL GDS+GGN+A+ V LRA D+L G IL+ P F G +RTESE L+ + D W+ LP G DR+H CNP Sbjct: 24 ISNFKVAYNILRRPDGTFNRHLAEYLDRKVTANANPVDGVFSF--DVLIDRRINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWVNSR--SWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGESGIDVL-----GNILLNPMFGGNERTESEKSLDGKYFVTVRDRDWYWKAFLPEGEDREHPACNP 265 The following BLAST results are available for this feature:
BLAST of DN620998 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DN620998 ID=DN620998; Name=DN620998; organism=Citrus sinensis; type=EST; length=745bpback to top |