DN620987

Overview
NameDN620987
Unique NameDN620987
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length722
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DN620987 vs. ExPASy Swiss-Prot
Match: VINSY_RAUSE (Vinorine synthase OS=Rauvolfia serpentina GN=ACT PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 4.236e-13
Identity = 58/187 (31.02%), Postives = 82/187 (43.85%), Query Frame = -1 
Query:  150 SRFEAVCGLIWGALIAMDREKNIDSTSTIVSIPVNLRNRMNPLLPEDCIGNLFHSVTCAANNEAGDGHRDKSTLARNVHESKKMVGDDFVRKVYQDGGVVFVNQYKEAVKELLKDGPNNDTTNSVRLFGFSGPIGLQYYEIDFGWGKPVWV-TSAMRMHNTAMLLDTRDGKGVEAWVGLPINDMPKL 707
            SR + V   IW  +I + R K       +V   VNLR+RMNP LP   +GN+   +  A + E     +D   L   +  S +   DD                      ELLK            L  F+    L +Y++DFGWGKP+   T+     N A+L+DTR G GVEAW+ +  ++M  L
Sbjct:  243 SRVQLVVAYIWKHVIDVTRAKYGAKNKFVVVQAVNLRSRMNPPLPHYAMGNIATLLFAAVDAE---WDKDFPDLIGPLRTSLEKTEDDHNH-------------------ELLKGMTCLYELEPQELLSFTSWCRLGFYDLDFGWGKPLSACTTTFPKRNAALLMDTRSGDGVEAWLPMAEDEMAML 407
The following BLAST results are available for this feature:
BLAST of DN620987 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
VINSY_RAUSE4.236e-1331.02Vinorine synthase OS=Rauvolfia serpentina GN=ACT P... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_06B12_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006B12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN620987 ID=DN620987; Name=DN620987; organism=Citrus sinensis; type=EST; length=722bp
AAGATGCACACGTCATGATTTTATTGATTGATTATATATGTAACAAACAT
ACAGAAGAATTTATTATCCTTTTGGGAGAAGAGGATTCAAATCCTGCTCC
TAGGGCTTGGAGTGAAAGAAGCATAAGTAAGGATGCCAGGATCTTGTTCA
AGTTTGGGCATGTCGTTGATAGGCAACCCTACCCAAGCTTCTACGCCTTT
ACCATCACGTGTATCTAAAAGCATGGCGGTATTATGCATTCTCATGGCAC
TGGTAACCCACACTGGCTTTCCCCATCCAAAATCAATTTCATAATATTGA
AGTCCAATTGGACCACTGAAACCAAACAACCTAACACTATTAGTAGTATC
ATTATTAGGACCATCCTTTAGAAGCTCTTTAACTGCTTCCTTATACTGAT
TCACAAAAACAACACCACCATCTTGATAAACTTTTCTCACAAAATCATCG
CCCACCATCTTTTTAGATTCATGAACATTTCTTGCTAAAGTACTCTTATC
ACGATGACCGTCACCTGCTTCGTTATTTGCTGCGCATGTAACCGAATGAA
AGAGGTTCCCAATACAATCTTCTGGTAGCAGTGGATTCATTCGATTCCGT
AAATTCACTGGTATTGACACTATAGTAGAAGTAGAATCAATATTTTTCTC
TCTGTCCATAGCTATCAAGGCACCCCAGATAAGCCCACAAACAGCCTCAA
ATCGTGATGGACTATATTGATG
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