DN620977

Overview
NameDN620977
Unique NameDN620977
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN620977 vs. ExPASy Swiss-Prot
Match: CATA_AVIMR (Catalase OS=Avicennia marina PE=2 SV=1)

HSP 1 Score: 311.612 bits (797), Expect = 2.838e-84
Identity = 141/174 (81.03%), Postives = 160/174 (91.95%), Query Frame = -1
Query:  221 NEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 742
            NEMLAF+P ++VPGI +SNDKMLQ RIFAYGDTQRHRLGPNYL+LPVNAPKC + NNHYDGFMNFMHRDEEVDYFPS+YDPTRHAER+PIP+ VITGRR++  IEKE+NFKQ G+RYRSWAPDRQERFL RW+ AL DPR+T E+RSIWVSYWSQAD+S GQKLASRLNVRP++
Sbjct:  319 NEMLAFSPHMIVPGINFSNDKMLQTRIFAYGDTQRHRLGPNYLLLPVNAPKCAYHNNHYDGFMNFMHRDEEVDYFPSKYDPTRHAERHPIPNAVITGRRDRRVIEKEDNFKQAGDRYRSWAPDRQERFLRRWVDALSDPRLTLEIRSIWVSYWSQADKSFGQKLASRLNVRPTM 492          
BLAST of DN620977 vs. ExPASy Swiss-Prot
Match: CATA1_NICPL (Catalase isozyme 1 (Fragment) OS=Nicotiana plumbaginifolia GN=CAT1 PE=2 SV=1)

HSP 1 Score: 308.145 bits (788), Expect = 3.138e-83
Identity = 137/174 (78.74%), Postives = 155/174 (89.08%), Query Frame = -1
Query:  221 NEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 742
            NE LAF P IVVPG+YYS+DKMLQ RIF+Y DTQR+RLGPNYL LP NAPKC H NNHYDG MNFMHRDEE+DYFPSRYDP RHAE+YPIPS + TG+REK  I+KENNFKQPGERYRS+ PDRQERF+ RW++ L DPR+T+E+RSIW+SYWSQAD+SLGQKLASRLNVRPSI
Sbjct:  312 NEQLAFCPSIVVPGVYYSDDKMLQTRIFSYSDTQRYRLGPNYLQLPANAPKCAHHNNHYDGSMNFMHRDEEIDYFPSRYDPVRHAEKYPIPSTMCTGKREKCVIQKENNFKQPGERYRSFTPDRQERFIRRWVETLSDPRITYEIRSIWISYWSQADKSLGQKLASRLNVRPSI 485          
BLAST of DN620977 vs. ExPASy Swiss-Prot
Match: CATA2_GOSHI (Catalase isozyme 2 OS=Gossypium hirsutum GN=CAT2 PE=2 SV=1)

HSP 1 Score: 306.605 bits (784), Expect = 9.130e-83
Identity = 137/174 (78.74%), Postives = 157/174 (90.23%), Query Frame = -1
Query:  221 NEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 742
            NE LAF P ++VPGIYYS+DK+LQ RIF+Y DTQRHRLGPNYL LP NAPKC H NNH++GFMNFMHRDEEV+YFPSRYDP RHAE++PIPS V++G+REK  I KENNFKQPGERYRS++ DRQERF+NRWI AL DPRVTHE+RSIW+SYWSQAD+SLGQK+ASRLNVRPSI
Sbjct:  319 NEQLAFCPSLIVPGIYYSDDKLLQTRIFSYSDTQRHRLGPNYLQLPANAPKCAHHNNHHEGFMNFMHRDEEVNYFPSRYDPVRHAEKHPIPSTVLSGKREKCIIGKENNFKQPGERYRSFSADRQERFINRWIDALSDPRVTHEIRSIWISYWSQADKSLGQKIASRLNVRPSI 492          
BLAST of DN620977 vs. ExPASy Swiss-Prot
Match: CATA1_GOSHI (Catalase isozyme 1 OS=Gossypium hirsutum GN=CAT1 PE=2 SV=2)

HSP 1 Score: 306.605 bits (784), Expect = 9.130e-83
Identity = 139/174 (79.89%), Postives = 153/174 (87.93%), Query Frame = -1
Query:  221 NEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 742
            NE LAF P IVVPGIYYS+DK+LQ RIF+Y DTQRHRLGPNYL LP NAPKC H NNH++GFMNFMHRDEE++YFPSRYDP RHAE +PIP  V TGRREK  IEKENNFKQPGERYRSWA DRQERF+ RW+ AL DPRVTHE+RSIW+SYWSQAD+S+GQKLAS LNVRPSI
Sbjct:  319 NEQLAFCPAIVVPGIYYSDDKLLQTRIFSYSDTQRHRLGPNYLQLPANAPKCAHHNNHHEGFMNFMHRDEEINYFPSRYDPVRHAEMFPIPPAVCTGRREKCIIEKENNFKQPGERYRSWAADRQERFICRWVDALSDPRVTHEIRSIWISYWSQADKSVGQKLASLLNVRPSI 492          
BLAST of DN620977 vs. ExPASy Swiss-Prot
Match: CATA4_SOYBN (Catalase-4 OS=Glycine max GN=CAT4 PE=2 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 7.729e-82
Identity = 134/174 (77.01%), Postives = 153/174 (87.93%), Query Frame = -1
Query:  221 NEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 742
            NE LAF P IVVPG+YYS+DKMLQ RIF+Y D+QRHRLGPNYL LP NAPKC H NNH++GFMNF+HRDEEV+YFPSRYDP RHAER+PIP  + +GRREK  IEKENNFKQPGERYRSWAPDRQ+RF  RW+ AL DPRVTHE+RS+W+SYWSQADRSLGQK+AS L+ RP+I
Sbjct:  319 NEQLAFCPAIVVPGVYYSDDKMLQTRIFSYADSQRHRLGPNYLQLPANAPKCAHHNNHHEGFMNFIHRDEEVNYFPSRYDPVRHAERFPIPPAICSGRREKCGIEKENNFKQPGERYRSWAPDRQDRFARRWVDALSDPRVTHEIRSVWISYWSQADRSLGQKIASHLSTRPNI 492          
BLAST of DN620977 vs. ExPASy Swiss-Prot
Match: CATA1_CUCPE (Catalase isozyme 1 OS=Cucurbita pepo GN=CAT1 PE=2 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 7.729e-82
Identity = 135/174 (77.59%), Postives = 153/174 (87.93%), Query Frame = -1
Query:  221 NEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 742
            NE LAF P I+VPG+YYS+DK+LQ RIF+Y DTQRHRLGPNYL LP NAPKC H NNH++GFMNFMHRDEEV+YFPSR+DP+RHAERYP P  V +G+RE+  IEKENNFK+PGERYRSW PDRQERF+ RW+ AL D RVTHE+RSIW+SYWSQADRSLGQKLAS LNVRPSI
Sbjct:  319 NEQLAFCPAIIVPGVYYSDDKLLQTRIFSYADTQRHRLGPNYLQLPANAPKCAHHNNHHEGFMNFMHRDEEVNYFPSRFDPSRHAERYPHPPAVCSGKRERCIIEKENNFKEPGERYRSWTPDRQERFVRRWVDALSDTRVTHEIRSIWISYWSQADRSLGQKLASHLNVRPSI 492          
BLAST of DN620977 vs. ExPASy Swiss-Prot
Match: CATA2_SOLLC (Catalase isozyme 2 OS=Solanum lycopersicum GN=CAT2 PE=2 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 1.009e-81
Identity = 136/174 (78.16%), Postives = 154/174 (88.51%), Query Frame = -1
Query:  221 NEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 742
            NE LAF P IVVPG+YYS+DKMLQ RIF+Y DTQR+RLGPNYL LP NAPKC H NNHYDG MNFMHRDEE+DYFPSRYD  RHAE YPIPS V +G+REK  I+KENNFKQPGERYRS+ PDRQERF+ RW++AL DPR+T+E+RSIW++YWSQAD+SLGQKLASRLNVRPSI
Sbjct:  319 NEQLAFCPSIVVPGVYYSDDKMLQTRIFSYSDTQRYRLGPNYLQLPANAPKCAHHNNHYDGSMNFMHRDEEIDYFPSRYDQVRHAEVYPIPSTVCSGKREKCIIQKENNFKQPGERYRSFTPDRQERFIRRWVEALSDPRITYEIRSIWITYWSQADKSLGQKLASRLNVRPSI 492          
BLAST of DN620977 vs. ExPASy Swiss-Prot
Match: CATA_HELAN (Catalase OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 1.722e-81
Identity = 136/173 (78.61%), Postives = 154/173 (89.02%), Query Frame = -1
Query:  224 NEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPS 742
            NE LAF P I+VPGIYYS+DK+LQ RIF+Y DTQRHRLGPNYL LP NAPKC H NNHYDGFMNFMHRDEE+DYFPSRYDP RHAE+YPIP   ++G+R+K  IEKENNFKQPGERYRS++PDRQERF+NR +  L DPRVTHEVRSIWVSYWSQAD+SLGQK+ASRLNV+P+
Sbjct:  319 NEQLAFCPAIIVPGIYYSDDKLLQTRIFSYSDTQRHRLGPNYLQLPANAPKCAHHNNHYDGFMNFMHRDEEIDYFPSRYDPARHAEQYPIPPVRLSGKRDKCVIEKENNFKQPGERYRSFSPDRQERFINRVVGGLSDPRVTHEVRSIWVSYWSQADKSLGQKIASRLNVKPN 491          
BLAST of DN620977 vs. ExPASy Swiss-Prot
Match: CATA3_NICPL (Catalase isozyme 3 OS=Nicotiana plumbaginifolia GN=CAT3 PE=2 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 1.722e-81
Identity = 135/174 (77.59%), Postives = 155/174 (89.08%), Query Frame = -1
Query:  221 NEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 742
            NE LAF P IVVPG+Y S+DK+LQ RIF+Y D QRHRLGPNYL LPVNAPKC H NNH++GFMNFMHRDEEV+YFPSR+DP RHAE+YPIP  V+TG+R+K  IEKENNFKQPGERYRSWAPDRQERF+ RW+ AL DPRVTHE+RSIW SYWSQAD++LGQK+ASRLNVRP++
Sbjct:  319 NEQLAFWPAIVVPGVYCSDDKLLQTRIFSYSDAQRHRLGPNYLQLPVNAPKCAHHNNHHEGFMNFMHRDEEVNYFPSRFDPCRHAEQYPIPPCVLTGKRDKCIIEKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRSIWFSYWSQADKTLGQKIASRLNVRPTM 492          
BLAST of DN620977 vs. ExPASy Swiss-Prot
Match: CATA1_SOYBN (Catalase-1/2 OS=Glycine max GN=CAT1 PE=2 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 1.722e-81
Identity = 132/174 (75.86%), Postives = 152/174 (87.36%), Query Frame = -1
Query:  221 NEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 742
            NE LAF P I+VPG+YYS+DK+LQ R+F+Y DTQRHRLGPNYL LP NAPKC H NNH+DGFMNFMHRDEEV+YFPSRYDP RHAE+ P+P  ++ G+REK  IEKENNFKQPGERYRSW  DRQERF+ RW+ AL DPRVTHE+RSIW+SYWSQADRSLGQK+AS LN++PSI
Sbjct:  319 NEQLAFCPAIIVPGVYYSDDKLLQTRVFSYADTQRHRLGPNYLQLPANAPKCAHHNNHHDGFMNFMHRDEEVNYFPSRYDPVRHAEKVPVPPRILGGKREKCMIEKENNFKQPGERYRSWPSDRQERFVRRWVDALSDPRVTHEIRSIWISYWSQADRSLGQKIASHLNLKPSI 492          
The following BLAST results are available for this feature:
BLAST of DN620977 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
CATA_AVIMR2.838e-8481.03Catalase OS=Avicennia marina PE=2 SV=1[more]
CATA1_NICPL3.138e-8378.74Catalase isozyme 1 (Fragment) OS=Nicotiana plumbag... [more]
CATA2_GOSHI9.130e-8378.74Catalase isozyme 2 OS=Gossypium hirsutum GN=CAT2 P... [more]
CATA1_GOSHI9.130e-8379.89Catalase isozyme 1 OS=Gossypium hirsutum GN=CAT1 P... [more]
CATA4_SOYBN7.729e-8277.01Catalase-4 OS=Glycine max GN=CAT4 PE=2 SV=1[more]
CATA1_CUCPE7.729e-8277.59Catalase isozyme 1 OS=Cucurbita pepo GN=CAT1 PE=2 ... [more]
CATA2_SOLLC1.009e-8178.16Catalase isozyme 2 OS=Solanum lycopersicum GN=CAT2... [more]
CATA_HELAN1.722e-8178.61Catalase OS=Helianthus annuus PE=2 SV=1[more]
CATA3_NICPL1.722e-8177.59Catalase isozyme 3 OS=Nicotiana plumbaginifolia GN... [more]
CATA1_SOYBN1.722e-8175.86Catalase-1/2 OS=Glycine max GN=CAT1 PE=2 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_06B07_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006B07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN620977 ID=DN620977; Name=DN620977; organism=Citrus sinensis; type=EST; length=742bp
TTTTTTTTTTTTTTTTTATTGAACTTCATAAAACAGACTTTTATTAATTG
AAACAACAGGAAAAGAGTCACATAACATGCAAGTTTATTTTCTATATTAC
AATATACAACAGCAAACATAGGATCGAAATTCTTCACATAGCTGCACCCT
TGGTGTTCACTCCTTGCTCACTCTTGGCAAGTCAAAAGCATCCAGTGTTC
CAGTTCAAGTGACACCTTCAAATGCTTGGCCTCACATTGAGACGAGAAGC
TAGCTTCTGACCCAGAGATCTGTCGGCCTGAGACCAGTAAGAGACCCATA
TGCTGCGAACCTCATGGGTGACACGTGGGTCACATAAAGCCTTAATCCAT
CGATTAAGGAACCTCTCTTGCCTGTCTGGGGCCCAGGATCGGTATCTCTC
TCCAGGCTGCTTGAAGTTGTTTTCCTTCTCAATGCAAGCCTTCTCACGCC
TTCCTGTAATTACATCAGAAGGAATGGGATATCTCTCAGCATGACGAGTA
GGATCATACCTCGAAGGAAAGTAATCGACCTCCTCATCCCTGTGCATGAA
ATTCATGAAACCATCATAATGATTGTTGCGATGAGGACATTTGGGTGCAT
TAACTGGAAGCATCAAGTAGTTGGGTCCAAGGCGATGCCTCTGGGTATCA
CCATAGGCAAAGATTCGACATTGGAGCATCTTATCATTTGAGTAGTAGAT
CCCAGGAACCACGATACCAGGGTTAAATGCAAGCATTTCATT
back to top