DN620955
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN620955 vs. ExPASy Swiss-Prot
Match: TM165_RAT (Transmembrane protein 165 OS=Rattus norvegicus GN=Tmem165 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.441e-21 Identity = 64/169 (37.87%), Postives = 87/169 (51.48%), Query Frame = 3 Query: 291 SGLGVFDAFIASFSMIIVSEIGDETFIIAALMAMRHPKSTVLSGALSALFVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWMSDPKSGQ-----------------XXXXXXXXXXXXSGQGKXXXXXXXXXXXXPIFLESFILTFLAEWGDRSQIAT 746 + LG AF+A+ S+IIVSE+GD+TF IAA+MAMR+ + TVL+GA+ AL +MT LS G +I R +T +T L+A FG+R+L P GQ +G PIF+++ LTFLAEWGDRSQ+ T Sbjct: 89 ANLGFIHAFVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALALMTCLSVLFG-YATTVIPRVYTYYVSTALFAIFGIRMLREGLKMSPDEGQEELEEVQAELKKKDEEFQRTKLLNGPDVETGTSTAIPQKKWLHFISPIFVQALTLTFLAEWGDRSQLTT 256
BLAST of DN620955 vs. ExPASy Swiss-Prot
Match: TM165_MOUSE (Transmembrane protein 165 OS=Mus musculus GN=Tmem165 PE=2 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 3.441e-21 Identity = 64/169 (37.87%), Postives = 87/169 (51.48%), Query Frame = 3 Query: 291 SGLGVFDAFIASFSMIIVSEIGDETFIIAALMAMRHPKSTVLSGALSALFVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWMSDPKSGQ-----------------XXXXXXXXXXXXSGQGKXXXXXXXXXXXXPIFLESFILTFLAEWGDRSQIAT 746 + LG AF+A+ S+IIVSE+GD+TF IAA+MAMR+ + TVL+GA+ AL +MT LS G +I R +T +T L+A FG+R+L P GQ +G PIF+++ LTFLAEWGDRSQ+ T Sbjct: 89 TNLGFIHAFVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALALMTCLSVLFG-YATTVIPRVYTYYVSTALFAIFGIRMLREGLKMSPDEGQEELEEVQAELKKKDEEFQRTKLLNGPDVETGTSTAIPQKKWLHFISPIFVQALTLTFLAEWGDRSQLTT 256
BLAST of DN620955 vs. ExPASy Swiss-Prot
Match: TM165_HUMAN (Transmembrane protein 165 OS=Homo sapiens GN=TMEM165 PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.441e-21 Identity = 65/170 (38.24%), Postives = 88/170 (51.76%), Query Frame = 3 Query: 291 SGLGVFDAFIASFSMIIVSEIGDETFIIAALMAMRHPKSTVLSGALSALFVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWMSDPKSG------------------QXXXXXXXXXXXXSGQGKXXXXXXXXXXXXPIFLESFILTFLAEWGDRSQIAT 746 + LG AF+A+ S+IIVSE+GD+TF IAA+MAMR+ + TVL+GA+ AL +MT LS G +I R +T +TVL+A FG+R+L P G Q +G PIF+++ LTFLAEWGDRSQ+ T Sbjct: 89 TNLGFIHAFVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALGLMTCLSVLFG-YATTVIPRVYTYYVSTVLFAIFGIRMLREGLKMSPDEGQEELEEVQAELKKKDEEFQRTKLLNGPGDVETGTSITVPQKKWLHFISPIFVQALTLTFLAEWGDRSQLTT 257
BLAST of DN620955 vs. ExPASy Swiss-Prot
Match: YD68_SCHPO (UPF0016 membrane protein C17G8.08c OS=Schizosaccharomyces pombe GN=SPAC17G8.08c PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.771e-17 Identity = 60/175 (34.29%), Postives = 83/175 (47.43%), Query Frame = 3 Query: 312 AFIASFSMIIVSEIGDETFIIAALMAMRHPKSTVLSGALSALFVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIA--WMSDPKSGQXXXXXXXXXXXXSG----------------------------QGKXXXXXXXXXXXXPIFLESFILTFLAEWGDRSQIAT 746 + I S SMI EIGD+TFI+AAL+A + + TV +G+ SALF+MT+L LG P L RK T+ VL+ FG+++L A M +S +G Q K P+F+++F LTF++EWGDRSQIAT Sbjct: 49 SLIFSISMIFGCEIGDKTFIVAALLAFENSRLTVFAGSYSALFIMTLLGVLLGHAAPLLFPRKLTDILGGVLFVIFGIKMLMEAKEVMDSKESMSDEFQNVRNEIAANGPIDQLLEEGAAPSHYTGHRSRSGHTLMSQLKSKGRNVMATLFSPLFIKAFALTFVSEWGDRSQIAT 223
BLAST of DN620955 vs. ExPASy Swiss-Prot
Match: Y615_SYNY3 (UPF0016 membrane protein sll0615 OS=Synechocystis sp. (strain PCC 6803) GN=sll0615 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.954e-16 Identity = 57/145 (39.31%), Postives = 78/145 (53.79%), Query Frame = 3 Query: 312 AFIASFSMIIVSEIGDETFIIAALMAMRHPKSTVLSGALSALFVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWMSDPKSGQXXXXXXXXXXXXSGQGKXXXXXXXXXXXXPIFLESFILTFLAEWGDRSQIAT 746 AF A +I VSE+GD+TF IA ++AMR+P+ VL G + L MT+LS +G+I L +R + N A L+ FG +LL+ A + SG+ K I +ESF LTF+AEWGDR+QIAT Sbjct: 4 AFTAGLLLITVSELGDKTFFIAMILAMRYPRRWVLVGVVGGLAAMTILSVLMGQIFTFLPTR-YINYAEVALFLIFGTKLLWDA-RRIKATANLEEMEDAEKAIASGEKKLKIVPRGWG----IVVESFALTFVAEWGDRTQIAT 142
BLAST of DN620955 vs. ExPASy Swiss-Prot
Match: YB37_YEAST (UPF0016 membrane protein YBR187W OS=Saccharomyces cerevisiae GN=YBR187W PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.495e-12 Identity = 37/80 (46.25%), Postives = 54/80 (67.50%), Query Frame = 3 Query: 312 AFIASFSMIIVSEIGDETFIIAALMAMRHPKSTVLSGALSALFVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGLRL 551 +F+ S SMI +SEIGD+TF+IAALMAMRH + V S A ++L +MT+LS +G +S ++T A +L+ FG +L Sbjct: 41 SFLMSVSMIGLSEIGDKTFLIAALMAMRHKRVLVFSAAATSLAIMTILSGVVGHSAVAFLSERYTAFFAGILFLVFGYKL 120 The following BLAST results are available for this feature:
BLAST of DN620955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DN620955 ID=DN620955; Name=DN620955; organism=Citrus sinensis; type=EST; length=747bpback to top |