DN620947

Overview
NameDN620947
Unique NameDN620947
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length588
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN620947 vs. ExPASy Swiss-Prot
Match: PLDB1_ARATH (Phospholipase D beta 1 OS=Arabidopsis thaliana GN=PLDBETA1 PE=2 SV=3)

HSP 1 Score: 328.561 bits (841), Expect = 1.452e-89
Identity = 153/197 (77.66%), Postives = 169/197 (85.79%), Query Frame = 1
Query:    1 WQQHFYVPVAHSAAEVHFFVKDSDVVGSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGKPCKPGATLTLSIQYTPMERLSFYHRGVGEGPDYNGVPGTYFPLRKGGKVTLYQDAHVPDGCLPHLGLDRGMSYVHGKCWYDICNAISQAQRLIYITGWSVWHKVKLVRD-ASPALDCTLGELLRSKSQEGVRVLLLVW 588
            W QHFYVPVAH AAEVHF VKDSDVVGS+LIG V IPVEQIYSG K+EGTYP+L  +GKPCKPGA L+LSIQYTPM++LS YH GVG GPDY GVPGTYFPLRKGG V LYQDAHVP+G LP + LD GM Y HGKCW+D+ +AI QA+RLIYITGWSVWHKVKL+RD   PA +CTLGELLRSKSQEGVRVLL +W
Sbjct:  226 WMQHFYVPVAHHAAEVHFVVKDSDVVGSQLIGLVTIPVEQIYSGAKIEGTYPILTSNGKPCKPGANLSLSIQYTPMDKLSVYHHGVGAGPDYQGVPGTYFPLRKGGTVRLYQDAHVPEGMLPGIRLDNGMFYEHGKCWHDMFDAIRQARRLIYITGWSVWHKVKLIRDKLGPASECTLGELLRSKSQEGVRVLLSIW 422          
BLAST of DN620947 vs. ExPASy Swiss-Prot
Match: PLDB2_ARATH (Phospholipase D beta 2 OS=Arabidopsis thaliana GN=PLDBETA2 PE=2 SV=2)

HSP 1 Score: 312.383 bits (799), Expect = 1.077e-84
Identity = 147/197 (74.62%), Postives = 165/197 (83.76%), Query Frame = 1
Query:    1 WQQHFYVPVAHSAAEVHFFVKDSDVVGSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGKPCKPGATLTLSIQYTPMERLSFYHRGVGEGPDYNGVPGTYFPLRKGGKVTLYQDAHVPDGCLPHLGLDRGMSYVHGKCWYDICNAISQAQRLIYITGWSVWHKVKLVRD-ASPALDCTLGELLRSKSQEGVRVLLLVW 588
            WQQHFYVPVAH AAEVHF VKDSD VGS+LIG V IPVEQIYSG ++EGTY + + +GKPCKPGATL+LSIQYT M +LS YH GVG GP Y GVPGTYFPLR+GG VTLYQDAHVP+G LP + L  GM Y HGKCW+D+ +AI QA+RLIYITGWSVWH V+LVRD   P+ +C LGELLRSKSQEGVRVLLLVW
Sbjct:  187 WQQHFYVPVAHHAAEVHFVVKDSDAVGSQLIGIVTIPVEQIYSGARIEGTYSIRDSNGKPCKPGATLSLSIQYTSMNKLSVYHSGVGAGPYYQGVPGTYFPLREGGSVTLYQDAHVPEGMLPGIKLGNGMCYEHGKCWHDMFHAICQARRLIYITGWSVWHNVRLVRDKEDPSSECRLGELLRSKSQEGVRVLLLVW 383          
BLAST of DN620947 vs. ExPASy Swiss-Prot
Match: PLDG1_ARATH (Phospholipase D gamma 1 OS=Arabidopsis thaliana GN=PLDGAMMA1 PE=1 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 5.356e-76
Identity = 133/196 (67.86%), Postives = 157/196 (80.10%), Query Frame = 1
Query:    1 WQQHFYVPVAHSAAEVHFFVKDSDVVGSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGKPCKPGATLTLSIQYTPMERLSFYHRGVGEGPDYNGVPGTYFPLRKGGKVTLYQDAHVPDGCLPHLGLDRGMSYVHGKCWYDICNAISQAQRLIYITGWSVWHKVKLVRDASPALDCTLGELLRSKSQEGVRVLLLVW 588
            W QHF VPVAHSAAEVHF VKDSD++GS+++G V IP EQ+ SG ++EG +P+LN SGKPCK GA L LSIQYTPMER+  Y  GVG G +  GVPGTYFPLRKGG+VTLYQDAHV DG LP + LD G+ Y HGKCW D+ +AI QA+RLIYITGWSV+H V+LVR  +   + TLGELL+ KSQEGVRVL+LVW
Sbjct:  113 WMQHFDVPVAHSAAEVHFVVKDSDIIGSQIMGAVGIPTEQLCSGNRIEGLFPILNSSGKPCKQGAVLGLSIQYTPMERMRLYQMGVGSGNECVGVPGTYFPLRKGGRVTLYQDAHVDDGTLPSVHLDGGIQYRHGKCWEDMADAIRQARRLIYITGWSVFHPVRLVRRTNDPTEGTLGELLKVKSQEGVRVLVLVW 308          
BLAST of DN620947 vs. ExPASy Swiss-Prot
Match: PLDG2_ARATH (Phospholipase D gamma 2 OS=Arabidopsis thaliana GN=PLDGAMMA2 PE=1 SV=3)

HSP 1 Score: 278.1 bits (710), Expect = 2.250e-74
Identity = 130/196 (66.33%), Postives = 158/196 (80.61%), Query Frame = 1
Query:    1 WQQHFYVPVAHSAAEVHFFVKDSDVVGSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGKPCKPGATLTLSIQYTPMERLSFYHRGVGEGPDYNGVPGTYFPLRKGGKVTLYQDAHVPDGCLPHLGLDRGMSYVHGKCWYDICNAISQAQRLIYITGWSVWHKVKLVRDASPALDCTLGELLRSKSQEGVRVLLLVW 588
            W QHF VPVAHSAAEVHF VKD+D +GS++IG V IP +Q+ SG ++EG +P+LN SGKPC+ GA L+LSIQYTPMER+  Y +GVG G +  GVPGTYFPLRKGG+VTLYQDAHV DG LP + LD G+ Y HGKCW D+ +AI +A+RLIYITGWSV+H V+LVR  +   + TLGELL+ KSQEGVRVL+LVW
Sbjct:  111 WMQHFDVPVAHSAAEVHFVVKDNDPIGSKIIGVVGIPTKQLCSGNRIEGLFPILNSSGKPCRKGAMLSLSIQYTPMERMRLYQKGVGSGVECVGVPGTYFPLRKGGRVTLYQDAHVDDGTLPSVHLDGGIQYRHGKCWEDMADAIRRARRLIYITGWSVFHPVRLVRRNNDPTEGTLGELLKVKSQEGVRVLVLVW 306          
BLAST of DN620947 vs. ExPASy Swiss-Prot
Match: PLDG3_ARATH (Phospholipase D gamma 3 OS=Arabidopsis thaliana GN=PLDGAMMA3 PE=2 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 6.548e-74
Identity = 130/196 (66.33%), Postives = 156/196 (79.59%), Query Frame = 1
Query:    1 WQQHFYVPVAHSAAEVHFFVKDSDVVGSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGKPCKPGATLTLSIQYTPMERLSFYHRGVGEGPDYNGVPGTYFPLRKGGKVTLYQDAHVPDGCLPHLGLDRGMSYVHGKCWYDICNAISQAQRLIYITGWSVWHKVKLVRDASPALDCTLGELLRSKSQEGVRVLLLVW 588
            W QHF VPVAHSAA+VHF VKDSD++GS++IG V IP EQ+ SG ++EG +P+LN  GKPCK GA L+LSIQY PMER+  Y +GVG G +  GVPGTYFPLRKGG+VTLYQDAHV DG LP + LD G+ Y HGKCW D+ +AI +A+RLIYITGWSV+H V+LVR  +     TLGELL+ KSQEGVRVL+LVW
Sbjct:  120 WMQHFDVPVAHSAAKVHFVVKDSDIIGSQIIGAVEIPTEQLCSGNRIEGLFPILNSRGKPCKQGAVLSLSIQYIPMERMRLYQKGVGFGVECVGVPGTYFPLRKGGRVTLYQDAHVDDGTLPSVHLDGGIQYRHGKCWEDMADAIRRARRLIYITGWSVFHPVRLVRRNNDPTQGTLGELLKVKSQEGVRVLVLVW 315          
BLAST of DN620947 vs. ExPASy Swiss-Prot
Match: PLDD1_ARATH (Phospholipase D delta OS=Arabidopsis thaliana GN=PLDDELTA PE=1 SV=2)

HSP 1 Score: 220.32 bits (560), Expect = 5.569e-57
Identity = 105/198 (53.03%), Postives = 135/198 (68.18%), Query Frame = 1
Query:    1 WQQHFYVPVAHSAAEVHFFVKDSDVVGSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGKPCKPGATLTLSIQYTPMERLSFYHRGVGEGPDYNGVPGTYFPLRKGGKVTLYQDAHVPDGCLPHLGLDRGMSYVHGKCWYDICNAISQAQRLIYITGWSVWHKVKLVRDASPA--LDCTLGELLRSKSQEGVRVLLLVW 588
            W + F + +AH  A + F VKD DV G+++IGT  IPV  I SG ++ G +PVL  SGKP K    + + +++TP +++  Y  G+   P+  GV  TYFP+RKG +V LYQDAHV DG LP +GLD G  Y HGKCW DIC AIS+A  +IYI GWS++HK+KLVR+       D TLGELL+ KSQEGVRVLLLVW
Sbjct:  104 WDEKFNISIAHPFAYLEFQVKDDDVFGAQIIGTAKIPVRDIASGERISGWFPVLGASGKPPKAETAIFIDMKFTPFDQIHSYRCGIAGDPERRGVRRTYFPVRKGSQVRLYQDAHVMDGTLPAIGLDNGKVYEHGKCWEDICYAISEAHHMIYIVGWSIFHKIKLVRETKVPRDKDMTLGELLKYKSQEGVRVLLLVW 301          
BLAST of DN620947 vs. ExPASy Swiss-Prot
Match: PLDA1_ARATH (Phospholipase D alpha 1 OS=Arabidopsis thaliana GN=PLDALPHA1 PE=1 SV=2)

HSP 1 Score: 171.014 bits (432), Expect = 3.874e-42
Identity = 86/199 (43.22%), Postives = 130/199 (65.33%), Query Frame = 1
Query:    1 WQQHFYVPVAHSAAEVHFFVKDSDVVGSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGKPCKPGATLTLSIQYTPMERLSFYHRGVGEGPDYNGVPGTYFPLRKGGKVTLYQDAHVPDGCLPHLGLDRGMSYVHGKCWYDICNAISQAQRLIYITGWSVWHKVKLVRDA---SPALDCTLGELLRSKSQEGVRVLLLVW 588
            W + F++  AH A+++ F VKD + +G+ LIG   IPV+Q+ +G +V+    +L+    P + G+ + + +QY  +E    ++ G+ +   + GVP T+F  R+G KV+LYQDAH+PD  +P + L  G +Y   +CW DI +AIS A+ LIYITGWSV+ ++ LVRD+    P  D T+GELL+ K+ EGVRVLLLVW
Sbjct:   76 WYESFHIYCAHLASDIIFTVKDDNPIGATLIGRAYIPVDQVINGEEVDQWVEILDNDRNPIQGGSKIHVKLQYFHVEEDRNWNMGI-KSAKFPGVPYTFFSQRQGCKVSLYQDAHIPDNFVPRIPLAGGKNYEPQRCWEDIFDAISNAKHLIYITGWSVYAEIALVRDSRRPKPGGDVTIGELLKKKASEGVRVLLLVW 273          
BLAST of DN620947 vs. ExPASy Swiss-Prot
Match: PLDA1_BRAOC (Phospholipase D alpha 1 OS=Brassica oleracea var. capitata GN=PLD1 PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 8.631e-42
Identity = 85/199 (42.71%), Postives = 129/199 (64.82%), Query Frame = 1
Query:    1 WQQHFYVPVAHSAAEVHFFVKDSDVVGSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGKPCKPGATLTLSIQYTPMERLSFYHRGVGEGPDYNGVPGTYFPLRKGGKVTLYQDAHVPDGCLPHLGLDRGMSYVHGKCWYDICNAISQAQRLIYITGWSVWHKVKLVRDA---SPALDCTLGELLRSKSQEGVRVLLLVW 588
            W + F++  AH A+++ F VKD + +G+ LIG   +PV+Q+  G +V+    +L+    P   G+ + + +QY  +E    +++G+ +   + GVP T+F  R+G KV+LYQDAH+PD  +P + L  G +Y   +CW DI +AIS AQ +IYITGWSV+ ++ LVRD+    P  D T+GELL+ K+ EGVRVLLLVW
Sbjct:   76 WYESFHIYCAHLASDIIFTVKDDNPIGATLIGRAYVPVDQVIHGEEVDQWVEILDNDRNPIHGGSKIHVKLQYFGVEADRNWNQGI-KSAKFPGVPYTFFSQRQGCKVSLYQDAHIPDNFVPRIPLAGGKNYEPQRCWEDIFDAISNAQHMIYITGWSVYTEIALVRDSRRPKPGGDVTVGELLKKKASEGVRVLLLVW 273          
BLAST of DN620947 vs. ExPASy Swiss-Prot
Match: PLDA1_RICCO (Phospholipase D alpha 1 OS=Ricinus communis GN=PLD1 PE=1 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 9.543e-41
Identity = 84/199 (42.21%), Postives = 125/199 (62.81%), Query Frame = 1
Query:    1 WQQHFYVPVAHSAAEVHFFVKDSDVVGSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGKPCKPGATLTLSIQYTPMERLSFYHRGVGEGPDYNGVPGTYFPLRKGGKVTLYQDAHVPDGCLPHLGLDRGMSYVHGKCWYDICNAISQAQRLIYITGWSVWHKVKLVRDA---SPALDCTLGELLRSKSQEGVRVLLLVW 588
            W + F+V  AH A+ V F VKD + +G+ LIG   +PVE++  G +++    +L+    P   G+ + + +QY  + +   + +G+     Y GVP TYF  R+G KV+LYQDAH+PD  +P + L  G  Y   +CW D+ +AI+ A+ LIYITGWSV+ ++ L+RD+    P  D TLGELL+ K+ EGVRVL+LVW
Sbjct:   75 WYESFHVYCAHQASNVIFTVKDDNPIGATLIGRAYVPVEELLDGEEIDRWVEILDEDKNPVHSGSKIHVKLQYFEVTKDRNWGQGI-RSSKYPGVPYTYFSQRQGCKVSLYQDAHIPDKFVPQIPLAGGNYYEPHRCWEDVFDAITNAKHLIYITGWSVYTEISLIRDSRRPKPGGDITLGELLKKKASEGVRVLMLVW 272          
BLAST of DN620947 vs. ExPASy Swiss-Prot
Match: PLDA1_TOBAC (Phospholipase D alpha 1 OS=Nicotiana tabacum GN=PLD1 PE=2 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 3.626e-40
Identity = 84/199 (42.21%), Postives = 123/199 (61.81%), Query Frame = 1
Query:    1 WQQHFYVPVAHSAAEVHFFVKDSDVVGSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGKPCKPGATLTLSIQYTPMERLSFYHRGVGEGPDYNGVPGTYFPLRKGGKVTLYQDAHVPDGCLPHLGLDRGMSYVHGKCWYDICNAISQAQRLIYITGWSVWHKVKLVRDA---SPALDCTLGELLRSKSQEGVRVLLLVW 588
            W + F++  AH A+ V F VKD + +G+ LIG   +PVE++  G +++    +L+    P   G+ + + +Q+  + R   + RG+     Y GVP T+F  R G +V+LYQDAHVPD  +P + L  G  Y   +CW DI +AI  A+ LIYITGWSV+ ++ LVRD+    P  D TLGELL+ K+ EGV+VL+LVW
Sbjct:   75 WYESFHIYCAHMASNVIFTVKDDNPIGATLIGRAYVPVEELLEGEEIDKWVEILDREMNPIAEGSKIHVKLQFFDVSRDPNWERGI-RSSKYPGVPYTFFAQRTGCRVSLYQDAHVPDNFIPKIPLSGGKYYEPHRCWEDIFDAIINAKHLIYITGWSVYTEITLVRDSRRQKPGGDITLGELLKKKASEGVKVLMLVW 272          
The following BLAST results are available for this feature:
BLAST of DN620947 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
PLDB1_ARATH1.452e-8977.66Phospholipase D beta 1 OS=Arabidopsis thaliana GN=... [more]
PLDB2_ARATH1.077e-8474.62Phospholipase D beta 2 OS=Arabidopsis thaliana GN=... [more]
PLDG1_ARATH5.356e-7667.86Phospholipase D gamma 1 OS=Arabidopsis thaliana GN... [more]
PLDG2_ARATH2.250e-7466.33Phospholipase D gamma 2 OS=Arabidopsis thaliana GN... [more]
PLDG3_ARATH6.548e-7466.33Phospholipase D gamma 3 OS=Arabidopsis thaliana GN... [more]
PLDD1_ARATH5.569e-5753.03Phospholipase D delta OS=Arabidopsis thaliana GN=P... [more]
PLDA1_ARATH3.874e-4243.22Phospholipase D alpha 1 OS=Arabidopsis thaliana GN... [more]
PLDA1_BRAOC8.631e-4242.71Phospholipase D alpha 1 OS=Brassica oleracea var. ... [more]
PLDA1_RICCO9.543e-4142.21Phospholipase D alpha 1 OS=Ricinus communis GN=PLD... [more]
PLDA1_TOBAC3.626e-4042.21Phospholipase D alpha 1 OS=Nicotiana tabacum GN=PL... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_06A13_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006A13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN620947 ID=DN620947; Name=DN620947; organism=Citrus sinensis; type=EST; length=588bp
TGGCAGCAACACTTCTATGTCCCTGTTGCACACTCTGCTGCAGAAGTCCA
CTTTTTTGTTAAAGACAGTGATGTTGTGGGGTCAGAATTGATAGGAACTG
TGGCAATTCCAGTGGAACAGATATACTCTGGTGGAAAAGTTGAAGGAACT
TATCCAGTCCTGAATGGTAGCGGGAAACCATGTAAGCCTGGTGCGACCTT
GACACTTTCAATACAGTACACCCCGATGGAGAGGCTGAGCTTTTATCACC
GTGGAGTGGGGGAAGGTCCTGATTATAATGGTGTTCCAGGAACATATTTT
CCTCTTAGGAAGGGTGGTAAAGTGACCCTTTATCAAGATGCCCATGTTCC
TGATGGGTGCCTTCCACACCTAGGGCTTGATAGGGGAATGTCTTATGTAC
ATGGGAAGTGTTGGTATGACATCTGCAATGCAATAAGTCAGGCACAACGT
TTAATTTACATTACAGGGTGGTCAGTTTGGCACAAAGTTAAACTGGTTCG
GGATGCTAGTCCTGCGTTAGATTGCACCCTTGGGGAACTTCTAAGATCAA
AGTCCCAGGAAGGAGTGAGAGTGCTGCTTCTTGTTTGG
back to top