DN620946

Overview
NameDN620946
Unique NameDN620946
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length727
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN620946 vs. ExPASy Swiss-Prot
Match: PLDB1_ARATH (Phospholipase D beta 1 OS=Arabidopsis thaliana GN=PLDBETA1 PE=2 SV=3)

HSP 1 Score: 270.011 bits (689), Expect = 9.042e-72
Identity = 122/156 (78.21%), Postives = 142/156 (91.03%), Query Frame = -3
Query:  255 RFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARLKHHPYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGNNNWQQFAADDQSEMRSHLIKYPVEVDRKGKVRPIPGYETFPDVGGNIVGSFFAIQENLTI 722
            RFM+YVHSKGM+VDDEYV++GSANINQRSMEGTRDTEIAMGAYQP++TWAR    P GQIYGYRMSLWAEH+  ++DCF QPE++ECVRKVR++G  NW+QFAA++ S+MR HL+KYPVEVDRKGKVRP+PG ETFPDVGGNIVG+F AIQENLTI
Sbjct:  812 RFMVYVHSKGMVVDDEYVVIGSANINQRSMEGTRDTEIAMGAYQPQHTWARKHSGPRGQIYGYRMSLWAEHMANLDDCFTQPESIECVRKVRTMGERNWKQFAAEEVSDMRGHLLKYPVEVDRKGKVRPLPGSETFPDVGGNIVGTFIAIQENLTI 967          
BLAST of DN620946 vs. ExPASy Swiss-Prot
Match: PLDB2_ARATH (Phospholipase D beta 2 OS=Arabidopsis thaliana GN=PLDBETA2 PE=2 SV=2)

HSP 1 Score: 263.462 bits (672), Expect = 8.463e-70
Identity = 120/156 (76.92%), Postives = 139/156 (89.10%), Query Frame = -3
Query:  255 RFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARLKHHPYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGNNNWQQFAADDQSEMRSHLIKYPVEVDRKGKVRPIPGYETFPDVGGNIVGSFFAIQENLTI 722
            RFMIYVHSKGM+VDDEYV++GSANINQRSMEGTRDTEIAMGAYQP++TWAR +  P GQIYGYRMSLWAEH+  ++DCF +PE+L CVRKVR+V   NW+QF +++ SEMR HL+KYPVEVDRKGKVRP+PG E FPDVGGN+VGSF AIQENLTI
Sbjct:  760 RFMIYVHSKGMVVDDEYVVIGSANINQRSMEGTRDTEIAMGAYQPQHTWARRQSGPRGQIYGYRMSLWAEHMALLDDCFVEPESLGCVRKVRTVAEENWEQFRSEEVSEMRGHLMKYPVEVDRKGKVRPLPGSEEFPDVGGNVVGSFLAIQENLTI 915          
BLAST of DN620946 vs. ExPASy Swiss-Prot
Match: PLDG1_ARATH (Phospholipase D gamma 1 OS=Arabidopsis thaliana GN=PLDGAMMA1 PE=1 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 7.673e-63
Identity = 107/156 (68.59%), Postives = 132/156 (84.62%), Query Frame = -3
Query:  255 RFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARLKHHPYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGNNNWQQFAADDQSEMRSHLIKYPVEVDRKGKVRPIPGYETFPDVGGNIVGSFFAIQENLTI 722
            RFMIYVHSKGM+VDDE+V++GSANINQRS+EGTRDTEIAMG YQP Y+WA     P+GQI+GYRMSLWAEHLG++E  F +PE +ECVR+VR +   NW+Q+AA++ +EM  HL+KYPV+VDR GKV  +PG ETFPD+GG I+GSF A+QENLTI
Sbjct:  703 RFMIYVHSKGMVVDDEFVLIGSANINQRSLEGTRDTEIAMGGYQPHYSWAMKGSRPHGQIFGYRMSLWAEHLGFLEQGFEEPENMECVRRVRQLSELNWRQYAAEEVTEMSGHLLKYPVQVDRTGKVSSLPGCETFPDLGGKIIGSFLALQENLTI 858          
BLAST of DN620946 vs. ExPASy Swiss-Prot
Match: PLDG3_ARATH (Phospholipase D gamma 3 OS=Arabidopsis thaliana GN=PLDGAMMA3 PE=2 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 2.916e-62
Identity = 105/156 (67.31%), Postives = 132/156 (84.62%), Query Frame = -3
Query:  255 RFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARLKHHPYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGNNNWQQFAADDQSEMRSHLIKYPVEVDRKGKVRPIPGYETFPDVGGNIVGSFFAIQENLTI 722
            RFMIYVHSKGM+VDDE+V++GSANINQRS+EGTRDTEIAMG YQP ++WA+    P GQI+GYRMSLWAEHLG++E  F +PE +ECVR+VR +   NW+Q+AA++ +EM  HL+KYPV+VDR GKV  +PGYETFPD+GG I+GSF  ++ENLTI
Sbjct:  711 RFMIYVHSKGMVVDDEFVLIGSANINQRSLEGTRDTEIAMGGYQPHHSWAKKGSRPRGQIFGYRMSLWAEHLGFLEQEFEEPENMECVRRVRQLSELNWRQYAAEEVTEMPGHLLKYPVQVDRTGKVSSLPGYETFPDLGGKIIGSFLVVEENLTI 866          
BLAST of DN620946 vs. ExPASy Swiss-Prot
Match: PLDG2_ARATH (Phospholipase D gamma 2 OS=Arabidopsis thaliana GN=PLDGAMMA2 PE=1 SV=3)

HSP 1 Score: 233.802 bits (595), Expect = 7.181e-61
Identity = 104/156 (66.67%), Postives = 130/156 (83.33%), Query Frame = -3
Query:  255 RFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARLKHHPYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGNNNWQQFAADDQSEMRSHLIKYPVEVDRKGKVRPIPGYETFPDVGGNIVGSFFAIQENLTI 722
            RFMIYVHSKGM+VDDE+V++GSANINQRS+EGTRDTEIAMG YQP ++WA+    P GQI+GYRMSLWAEHLG++E  F +PE +ECVR+VR +   NW Q+AA++ +EM  HL+KYPV+VD+ GKV  +PG ETFPD+GG I+GSF  +QENLTI
Sbjct:  701 RFMIYVHSKGMVVDDEFVLIGSANINQRSLEGTRDTEIAMGGYQPHHSWAKKGSRPRGQIFGYRMSLWAEHLGFLEQEFEEPENMECVRRVRQLSELNWGQYAAEEVTEMSGHLLKYPVQVDKTGKVSSLPGCETFPDLGGKIIGSFLTLQENLTI 856          
BLAST of DN620946 vs. ExPASy Swiss-Prot
Match: PLDD1_ARATH (Phospholipase D delta OS=Arabidopsis thaliana GN=PLDDELTA PE=1 SV=2)

HSP 1 Score: 216.083 bits (549), Expect = 1.550e-55
Identity = 100/156 (64.10%), Postives = 122/156 (78.21%), Query Frame = -3
Query:  258 RFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARLKHHPYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGNNNWQQFAADDQSEMRSHLIKYPVEVDRKGKVRPIPGYETFPDVGGNIVGSF-FAIQENLT 722
            RFMIYVH+KGMIVDDEYV++GSANINQRSM GT+DTEIAMGAYQP +TWA    HP GQ+YGYRMSLWAEHLG   D F +P  LEC++KV ++   NW++F     SE++ HLIKYP++VD  GKV P+P YETFPDVGG I+G+   A+ + LT
Sbjct:  712 RFMIYVHAKGMIVDDEYVLMGSANINQRSMAGTKDTEIAMGAYQPNHTWAHKGRHPRGQVYGYRMSLWAEHLGKTGDEFVEPSDLECLKKVNTISEENWKRFIDPKFSELQGHLIKYPLQVDVDGKVSPLPDYETFPDVGGKIIGAHSMALPDTLT 867          
BLAST of DN620946 vs. ExPASy Swiss-Prot
Match: PLDA1_MAIZE (Phospholipase D alpha 1 OS=Zea mays GN=PLD1 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.837e-41
Identity = 80/147 (54.42%), Postives = 105/147 (71.43%), Query Frame = -3
Query:  285 RFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARLKHHPYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGNNNWQQFAADD-QSEMRSHLIKYPVEVDRKGKVRPIPGYETFPDVGGNIVGS 722
            RFMIYVH+K MIVDDEY+I+GSANINQRSM+G RD+EIAMGAYQP +   R      GQI+G+RMSLW EHLG +ED F +PE++ECV+KV  V    W  +++DD + ++  HL+ YP+ V   G V  +PG E FPD    ++G+
Sbjct:  657 RFMIYVHTKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGAYQPYHLATR--QPARGQIHGFRMSLWYEHLGMLEDVFQRPESVECVQKVNEVAEKYWDLYSSDDLEQDLPGHLLSYPIGVTADGSVTELPGMENFPDTRARVLGN 801          
BLAST of DN620946 vs. ExPASy Swiss-Prot
Match: PLDA1_ORYSJ (Phospholipase D alpha 1 OS=Oryza sativa subsp. japonica GN=PLD1 PE=1 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 3.137e-40
Identity = 78/147 (53.06%), Postives = 104/147 (70.75%), Query Frame = -3
Query:  285 RFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARLKHHPYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGNNNWQQFAADD-QSEMRSHLIKYPVEVDRKGKVRPIPGYETFPDVGGNIVGS 722
            RFMIYVH+K MIVDDEY+I+GSANINQRSM+G RD+EIAMG YQP +   R      GQI+G+RM+LW EHLG ++D F +PE+LECV+KV  +    W  +++DD Q ++  HL+ YP+ V   G V  +PG E FPD    ++G+
Sbjct:  657 RFMIYVHTKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGGYQPYHLATR--QPARGQIHGFRMALWYEHLGMLDDVFQRPESLECVQKVNRIAEKYWDMYSSDDLQQDLPGHLLSYPIGVASDGVVTELPGMEYFPDTRARVLGA 801          
BLAST of DN620946 vs. ExPASy Swiss-Prot
Match: PLDA2_BRAOC (Phospholipase D alpha 2 OS=Brassica oleracea var. capitata GN=PLD2 PE=1 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 2.033e-39
Identity = 74/147 (50.34%), Postives = 105/147 (71.43%), Query Frame = -3
Query:  285 RFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARLKHHPYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGNNNWQQFAADD-QSEMRSHLIKYPVEVDRKGKVRPIPGYETFPDVGGNIVGS 722
            RFMIYVHSK MIVDDEY+I+GSANINQRSM+G RD+EIAMG YQP +   R      GQ++G+RMSLW EHLG +++ F  P +LEC+ KV  + +  W  ++++  + ++  HL++YP+ VD +G +  +PG+E FPD    I+G+
Sbjct:  657 RFMIYVHSKMMIVDDEYIIVGSANINQRSMDGARDSEIAMGGYQPHHLSHR--QPARGQVHGFRMSLWYEHLGMLDETFLDPSSLECIEKVNRIADKYWDFYSSESLEHDLPGHLLRYPISVDNEGNITELPGFEFFPDSKARILGN 801          
BLAST of DN620946 vs. ExPASy Swiss-Prot
Match: PLDA1_BRAOC (Phospholipase D alpha 1 OS=Brassica oleracea var. capitata GN=PLD1 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.468e-39
Identity = 75/147 (51.02%), Postives = 105/147 (71.43%), Query Frame = -3
Query:  285 RFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARLKHHPYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGNNNWQQFAADD-QSEMRSHLIKYPVEVDRKGKVRPIPGYETFPDVGGNIVGS 722
            RFMIYVH+K MIVDDEY+I+GSANINQRSM+G RD+EIAMG YQP +   R      GQI+G+RMSLW EHLG +++ F  P ++EC+ KV  + +  W  ++++  + ++  HL++YPV+VD +G V   PG+E FPD    I+G+
Sbjct:  655 RFMIYVHTKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGGYQPHHLSHR--QPARGQIHGFRMSLWYEHLGMLDETFLDPSSVECIEKVNRISDKYWDLYSSESLEHDLPGHLLRYPVDVDGEGDVTEFPGFEFFPDTKARILGT 799          
The following BLAST results are available for this feature:
BLAST of DN620946 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
PLDB1_ARATH9.042e-7278.21Phospholipase D beta 1 OS=Arabidopsis thaliana GN=... [more]
PLDB2_ARATH8.463e-7076.92Phospholipase D beta 2 OS=Arabidopsis thaliana GN=... [more]
PLDG1_ARATH7.673e-6368.59Phospholipase D gamma 1 OS=Arabidopsis thaliana GN... [more]
PLDG3_ARATH2.916e-6267.31Phospholipase D gamma 3 OS=Arabidopsis thaliana GN... [more]
PLDG2_ARATH7.181e-6166.67Phospholipase D gamma 2 OS=Arabidopsis thaliana GN... [more]
PLDD1_ARATH1.550e-5564.10Phospholipase D delta OS=Arabidopsis thaliana GN=P... [more]
PLDA1_MAIZE2.837e-4154.42Phospholipase D alpha 1 OS=Zea mays GN=PLD1 PE=2 S... [more]
PLDA1_ORYSJ3.137e-4053.06Phospholipase D alpha 1 OS=Oryza sativa subsp. jap... [more]
PLDA2_BRAOC2.033e-3950.34Phospholipase D alpha 2 OS=Brassica oleracea var. ... [more]
PLDA1_BRAOC3.468e-3951.02Phospholipase D alpha 1 OS=Brassica oleracea var. ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06A13_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006A13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN620946 ID=DN620946; Name=DN620946; organism=Citrus sinensis; type=EST; length=727bp
TTTTTTTTTTCATATTGAAAGCCAAAGGGCCATTAATTAGATGCAAAAAT
GGAAATAAAAGTTAAAAATCAAATAGACAGGCACATGATTTTCTAACTGT
ATATCTACTTATTTACAAAATCAGGGGATTATCAAACTATGTTAATACCC
ATAGGGAGTCGGAAGCTATACATCAACATGGGTTTTTGATGACACATGTC
AAAATTTGTATGTATCTCTTACTATTTACCTTGTTAACTTCCAGTAACTG
TTCAAATGGTAAGATTCTCCTGAATTGCAAAAAATGAGCCAACTATGTTT
CCTCCCACGTCTGGGAATGTTTCATATCCTGGAATTGGCCTCACCTTGCC
TTTTCGATCCACTTCAACTGGGTACTTTATAAGGTGGCTCCTCATTTCAG
ATTGATCATCTGCAGCAAACTGCTGCCAGTTATTATTGCCTACTGATCTA
ACCTTTCTTACACATTCCAGAGTCTCGGGTTGTCCGAAGCAGTCCTCAAT
GTATCCAAGATGTTCTGCCCATAGCGACATTCTATATCCATAGATCTGTC
CATAAGGATGATGTTTCAGTCTAGCCCAAGTATATTCAGGTTGGTAGGCT
CCCATTGCAATCTCTGTGTCTCTTGTGCCCTCCATGGAGCGCTGATTGAT
GTTTGCAGACCCCAGTATCACATACTCATCATCAACAATCATCCCTTTTG
AATGAACATAAATCATGAATCGTCCAC
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