DN620943

Overview
NameDN620943
Unique NameDN620943
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length540
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN620943 vs. ExPASy Swiss-Prot
Match: USF_AQUPY (Protein usf OS=Aquifex pyrophilus GN=usf PE=4 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.403e-13
Identity = 50/157 (31.85%), Postives = 78/157 (49.68%), Query Frame = 1
Query:   94 IQIQRDDTTFDAYVVG-KEDAPGIVVVQEWWGVDFEIKNHAVKISQL-NPGFKALIPDLYRGKVGLDTAEAQHLMSG-----LDWPGAVKDIHASVNWLKA---NGSKKVGVTGYCMGGALAIASSVLVPE-VDAVVSFYGVPPPELADPTQAKAPV 531
            ++ +++      Y+   K   PG++V+ EWWG++  + N      +    GF A  PD Y GK   +  +A  LM+      +D   A+    ASV++LK       KKVGVTG+C GG L++  +   P+ +DA V FYG+P     D    K P+
Sbjct:    5 VEFEKNGVKVRGYIATPKWGGPGVIVIHEWWGLESPLSNIKEICDRFAQEGFVAFAPDFYEGKYADNPDDAGKLMTDMFENRMDKVDAI--FKASVDFLKECRYTSPKKVGVTGFCCGGTLSMYFAGKFPDLIDASVPFYGLPQITKIDAENIKVPI 159          
BLAST of DN620943 vs. ExPASy Swiss-Prot
Match: DLHH_AQUAE (Putative carboxymethylenebutenolidase OS=Aquifex aeolicus GN=aq_1997 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.715e-11
Identity = 46/155 (29.68%), Postives = 77/155 (49.68%), Query Frame = 1
Query:   94 IQIQRDDTTFDAYVVGKEDA-PGIVVVQEWWGVDFEIKNHAVKISQL-NPGFKALIPDLYRGKVGLDTAEAQHLMSGL---DWPGAVKDIHASVNWLKA---NGSKKVGVTGYCMGGALAIASSVLVPE-VDAVVSFYGVPPPELADPTQAKAPV 531
            ++ +++      Y+   + A P ++V  EWWG++  + N      +L + GF A  PD Y+G+   +  +A  LM+ +         +   ASV ++K       KKVG+TG+C GG LA+  +   PE VDA + FYG+P     +    K P+
Sbjct:    5 VEFEKNGVKVRGYIATPKWAGPAVLVFHEWWGLESPLSNIKEICDKLADEGFVAFAPDFYKGQYADNPDDAGKLMTEMFEKRMDEVDRIFQASVEFVKECRYTYPKKVGITGFCCGGTLAMYFAAKFPEMVDASLPFYGLPQLTQINAENIKVPI 159          
The following BLAST results are available for this feature:
BLAST of DN620943 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
USF_AQUPY1.403e-1331.85Protein usf OS=Aquifex pyrophilus GN=usf PE=4 SV=1[more]
DLHH_AQUAE1.715e-1129.68Putative carboxymethylenebutenolidase OS=Aquifex a... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_06A11_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN620943 ID=DN620943; Name=DN620943; organism=Citrus sinensis; type=EST; length=540bp
CTTAAGCCATCTCTCGCAAGGACTCACTTTCCCGCCGGTTATCGCTTTGC
AGTCAGATCAATGGCAGACTCTGCAGCTTCTCCCTTCAAGAAAATCCAGA
TTCAGAGAGATGATACTACTTTTGATGCATATGTGGTTGGCAAAGAAGAC
GCCCCTGGGATTGTTGTAGTTCAGGAGTGGTGGGGTGTTGATTTTGAGAT
CAAGAACCATGCTGTCAAAATCTCCCAACTAAATCCTGGATTCAAGGCAC
TTATACCAGATTTATATCGGGGAAAGGTTGGTTTGGATACTGCTGAAGCA
CAGCACTTGATGAGTGGTCTTGATTGGCCAGGTGCTGTCAAGGATATCCA
CGCTTCAGTTAATTGGCTTAAGGCAAATGGTTCCAAGAAGGTTGGCGTGA
CTGGATATTGCATGGGAGGTGCTCTCGCTATTGCAAGTTCTGTCTTAGTT
CCTGAGGTTGATGCTGTTGTTTCATTTTATGGGGTTCCCCCACCTGAGCT
CGCCGATCCTACCCAGGCTAAGGCACCTGTTCAAGCTCAT
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