DN620939

Overview
NameDN620939
Unique NameDN620939
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length731
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN620939 vs. ExPASy Swiss-Prot
Match: E1311_ARATH (Glucan endo-1,3-beta-glucosidase 11 OS=Arabidopsis thaliana GN=At1g32860 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.233e-28
Identity = 59/75 (78.67%), Postives = 67/75 (89.33%), Query Frame = -1
Query:  513 DEDEAGATPENAKKYNGNLIKLISS--KKGTPMRPNCDLNIYVFALFNENLKPGPTSERNYGLFKPDGSPAYSLG 731
            D+DE GATPENAK+YNGNLIK++ S  K  TP++PN DL+IYVFALFNENLKPGPTSERNYGLFKPDG+ AYSLG
Sbjct:  274 DDDEVGATPENAKRYNGNLIKMMMSGKKTKTPLKPNNDLSIYVFALFNENLKPGPTSERNYGLFKPDGTQAYSLG 348          
BLAST of DN620939 vs. ExPASy Swiss-Prot
Match: E1310_ARATH (Glucan endo-1,3-beta-glucosidase 10 OS=Arabidopsis thaliana GN=At5g42100 PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.175e-26
Identity = 56/75 (74.67%), Postives = 64/75 (85.33%), Query Frame = -1
Query:  510 DEDEAGATPENAKKYNGNLIKLISSKK-GTPMRPNCDLNIYVFALFNENLKPGPTSERNYGLFKPDGSPAYSLGI 731
            D  E GAT +NA+KYNGNLIK++ SKK  TP+RP CDL I+VFALFNEN+KPGPTSERNYGLF PDG+P YSLGI
Sbjct:  274 DPQEVGATCDNARKYNGNLIKMMMSKKMRTPIRPECDLTIFVFALFNENMKPGPTSERNYGLFNPDGTPVYSLGI 348          
BLAST of DN620939 vs. ExPASy Swiss-Prot
Match: E1314_ARATH (Glucan endo-1,3-beta-glucosidase 14 OS=Arabidopsis thaliana GN=At2g27500/F10A12.18 PE=1 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 2.451e-24
Identity = 49/74 (66.22%), Postives = 61/74 (82.43%), Query Frame = -1
Query:  510 DEDEAGATPENAKKYNGNLIKLISSKKGTPMRPNCDLNIYVFALFNENLKPGPTSERNYGLFKPDGSPAYSLGI 731
            DE+E GA+PENA  YNGNL+KLI  +KGTP + +  +++YVFALFNENLKPGP SERNYGLF PDG P Y++G+
Sbjct:  275 DENEIGASPENAALYNGNLLKLIQQRKGTPAKQSVPIDVYVFALFNENLKPGPVSERNYGLFYPDGKPVYNVGM 348          
BLAST of DN620939 vs. ExPASy Swiss-Prot
Match: E137_ARATH (Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana GN=At4g34480 PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.103e-16
Identity = 40/74 (54.05%), Postives = 54/74 (72.97%), Query Frame = -1
Query:  510 DEDEAGATPENAKKYNGNLIKLISSKKGTPMRPNCDLNIYVFALFNENLKPGPTSERNYGLFKPDGSPAYSLGI 731
            D +E GA+ +NAK YNGNLI  + S  GTP+ P   ++ Y+FAL++ENLKPGP+SER +GLFK D S  Y +G+
Sbjct:  272 DANEVGASVDNAKAYNGNLIAHLRSMVGTPLMPGKPVDTYIFALYDENLKPGPSSERAFGLFKTDLSMVYDVGL 345          
BLAST of DN620939 vs. ExPASy Swiss-Prot
Match: E1312_ARATH (Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana GN=At4g29360 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.122e-14
Identity = 35/69 (50.72%), Postives = 49/69 (71.01%), Query Frame = -1
Query:  516 EAGATPENAKKYNGNLIKLISSKKGTPMRPNCDLNIYVFALFNENLKPGPTSERNYGLFKPDGSPAYSL 722
            E  ATPENA  YN NLI+ +    GTP +P  ++++Y+F+LFNEN KPG  SERN+G+F  +G+  Y+L
Sbjct:  275 ETAATPENALAYNTNLIRHVIGDPGTPAKPGEEIDVYLFSLFNENRKPGIESERNWGMFYANGTNVYAL 343          
BLAST of DN620939 vs. ExPASy Swiss-Prot
Match: E13B_WHEAT (Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.690e-14
Identity = 33/71 (46.48%), Postives = 49/71 (69.01%), Query Frame = -1
Query:  510 EAGATPENAKKYNGNLIKLISSKKGTPMRPNCDLNIYVFALFNENLKPGPTSERNYGLFKPDGSPAYSLGI 722
            + G   + A+ +N  +I++ SS KGTP+ PN     Y+F+LF+EN KPGP +ER++GLF PD +P Y LG+
Sbjct:  276 QIGVGVQEARDFNEGMIRVCSSGKGTPLMPNRTFETYLFSLFDENQKPGPIAERHFGLFNPDFTPVYDLGL 346          
BLAST of DN620939 vs. ExPASy Swiss-Prot
Match: E1313_ARATH (Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana GN=At5g56590 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.141e-13
Identity = 33/71 (46.48%), Postives = 51/71 (71.83%), Query Frame = -1
Query:  516 EDEAGATPENAKKYNGNLIKLISSKKGTPMRPNCDLNIYVFALFNENLKPGPTSERNYGLFKPDGSPAYSL 728
            +++A A+ +NA+ YN N+I+ + + +GTP +P   +N+Y+F+LFNEN K G  SERN+GLF PD +  Y L
Sbjct:  274 KEKAAASSDNAETYNSNIIRHVVTNQGTPAKPGEAMNVYIFSLFNENRKAGLDSERNWGLFYPDQTSVYQL 344          
BLAST of DN620939 vs. ExPASy Swiss-Prot
Match: E133_ARATH (Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana GN=At2g01630 PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.947e-13
Identity = 33/69 (47.83%), Postives = 47/69 (68.12%), Query Frame = -1
Query:  516 EAGATPENAKKYNGNLIKLISSKKGTPMRPNCDLNIYVFALFNENLKPGPTSERNYGLFKPDGSPAYSL 722
            E  AT ENA  YN NLI+ + +K GTP  P   +  Y++ L+NE+ +PGP SE+N+GLF  +G+P Y+L
Sbjct:  274 EHDATVENANTYNSNLIQHVINKTGTPKHPGTAVTTYIYELYNEDTRPGPVSEKNWGLFYTNGTPVYTL 342          
BLAST of DN620939 vs. ExPASy Swiss-Prot
Match: E134_ARATH (Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana GN=At3g13560 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.648e-12
Identity = 31/72 (43.06%), Postives = 48/72 (66.67%), Query Frame = -1
Query:  510 DEAGATPENAKKYNGNLIKLISSKKGTPMRPNCDLNIYVFALFNENLKPGPTSERNYGLFKPDGSPAYSLGI 725
            DEA AT  NA+ +N NLIK + +  G P +P+  +N Y++ L+NE+ + GP SERN+G+  P+G+  Y L +
Sbjct:  276 DEAAATVANAETFNTNLIKRVLNNSGPPSQPDIPINTYIYELYNEDKRSGPVSERNWGILFPNGTSVYPLSL 347          
BLAST of DN620939 vs. ExPASy Swiss-Prot
Match: EA6_ARATH (Probable glucan endo-1,3-beta-glucosidase A6 OS=Arabidopsis thaliana GN=A6 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.262e-12
Identity = 36/74 (48.65%), Postives = 47/74 (63.51%), Query Frame = -1
Query:  516 DEDEAGATPENAKKYNGNLIKLISSKK--GTPMRPNCDLNIYVFALFNENLKPGPTSERNYGLFKPDGSPAYSL 731
            D DE GA   NA  YN NLIK +S+    GTP RP   +  +VF+LFNEN K G  ++R++G+  PDGSP Y +
Sbjct:  288 DIDETGANILNAATYNRNLIKKMSASPPIGTPSRPGLPIPTFVFSLFNENQKSGSGTQRHWGILHPDGSPIYDV 361          
The following BLAST results are available for this feature:
BLAST of DN620939 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
E1311_ARATH6.233e-2878.67Glucan endo-1,3-beta-glucosidase 11 OS=Arabidopsis... [more]
E1310_ARATH1.175e-2674.67Glucan endo-1,3-beta-glucosidase 10 OS=Arabidopsis... [more]
E1314_ARATH2.451e-2466.22Glucan endo-1,3-beta-glucosidase 14 OS=Arabidopsis... [more]
E137_ARATH1.103e-1654.05Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis ... [more]
E1312_ARATH5.122e-1450.72Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis... [more]
E13B_WHEAT6.690e-1446.48Glucan endo-1,3-beta-glucosidase OS=Triticum aesti... [more]
E1313_ARATH1.141e-1346.48Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... [more]
E133_ARATH1.947e-1347.83Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis ... [more]
E134_ARATH1.648e-1243.06Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis ... [more]
EA6_ARATH6.262e-1248.65Probable glucan endo-1,3-beta-glucosidase A6 OS=Ar... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06A09_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN620939 ID=DN620939; Name=DN620939; organism=Citrus sinensis; type=EST; length=731bp
TCCTGCGTCTCTCACCCAATACACGCCGTTCACAATAATGACACAGAATG
AAAGATACAACAACAAGAGTGGATGAATAATTAAATTTCCTCTAAATTTA
GATCTAAAAACTAACAATGCCGGTCCACCTCCGATCTACCGTTGACTCAA
GATCAAACTTAACATATTGCACGATCTAAGTTATTGAAATATACACCCCT
TTCCCCAACCCCAAAGCTGTCTCTTATTGTTTCACGGACTTTTAACGGCT
GATTTTGATTATCATGCCTAACGTTGAATGCCGATTCCAAATTTTCTACA
ATCCCTAGCTACAGAAGCAAACTGATTAAAAAGAACACCAGCACGAGCAT
CACGGACCCAACAAACTCATATCTTGCCTTAGTGGCAGAAGAGATGGACA
AATAGCCAGTGGAACCGGAACCAGAATCGGGATCGTTACCAGAGGAAGTA
TCCGGCAGGGCGGGGGGAGTGGGGGAAGCGACAGTGGTGTTGGCGGCGGT
CACCGCACTAATCCCAAGTGAATAAGCCGGGGATCCATCCGGCTTAAACA
GCCCGTAATTTCTCTCAGAAGTAGGTCCAGGCTTCAGATTTTCATTAAAC
AAAGCAAACACATAAATGTTCAAATCACAGTTGGGTCTCATGGGAGTCCC
TTTCTTTGACGAAATCAACTTGATCAAATTTCCATTATACTTCTTTGCAT
TTTCGGGAGTAGCCCCAGCTTCATCCTCATC
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