DN620937

Overview
NameDN620937
Unique NameDN620937
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length214
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DN620937 vs. ExPASy Swiss-Prot
Match: SPZX_ARATH (Serpin-ZX OS=Arabidopsis thaliana GN=At1g47710 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.085e-13
Identity = 36/60 (60.00%), Postives = 50/60 (83.33%), Query Frame = 2 
Query:   35 MDVRESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSF 214
            MDVRESIS Q  V+++L KHV  T +++SN++FSP+SI+V+LS+I+AGS G T DQ+LSF
Sbjct:    1 MDVRESISLQNQVSMNLAKHVITTVSQNSNVIFSPASINVVLSIIAAGSAGATKDQILSF 60
[Close]
BLAST of DN620937 vs. ExPASy Swiss-Prot
Match: SPZ10_ARATH (Serpin-Z10 OS=Arabidopsis thaliana GN=At2g25240 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.548e-11
Identity = 36/60 (60.00%), Postives = 44/60 (73.33%), Query Frame = 2 
Query:   35 MDVRESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSF 214
            M++ +SI N  DV + LTKHV  T A  SNLVFSP SI+VLLSLI+AGS   T +Q+LSF
Sbjct:    1 MELGKSIENHNDVVVRLTKHVIATVANGSNLVFSPISINVLLSLIAAGSCSVTKEQILSF 60
The following BLAST results are available for this feature:
BLAST of DN620937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
SPZX_ARATH2.085e-1360.00Serpin-ZX OS=Arabidopsis thaliana GN=At1g47710 PE=... [more]
SPZ10_ARATH2.548e-1160.00Serpin-Z10 OS=Arabidopsis thaliana GN=At2g25240 PE... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_06A08_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006A08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN620937 ID=DN620937; Name=DN620937; organism=Citrus sinensis; type=EST; length=214bp
CTTCATCGTTTCCAGAGAGAGTAGTTTGCAGAGCATGGACGTACGCGAAT
CAATCAGCAACCAAACCGACGTCGCTTTGTCTCTAACAAAGCACGTTGCC
CTAACCGAAGCTAAAGACTCGAACCTCGTCTTCTCGCCGTCATCGATCCA
CGTTCTGCTGAGCCTGATCTCGGCTGGATCCAAGGGCCCCACTCTCGACC
AGTTGCTCTCTTTT
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