DN620933
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN620933 vs. ExPASy Swiss-Prot
Match: RS8_MAIZE (40S ribosomal protein S8 OS=Zea mays GN=RPS8 PE=2 SV=2) HSP 1 Score: 244.202 bits (622), Expect = 3.361e-64 Identity = 128/173 (73.99%), Postives = 133/173 (76.88%), Query Frame = 3 Query: 51 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXDAPATEEAKKSSHVLRKLEKRQKDRTLDPHIE 569 MGISRDSMH YELGRQPANTKLSSNKTVRR+RVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYL HYGVDIGR +A A EE KKS+HV RKLEKR++ RTLDPHIE Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGRKKKTPAAKKDNAEGQEVEA-AAEETKKSNHVTRKLEKRKEGRTLDPHIE 172
BLAST of DN620933 vs. ExPASy Swiss-Prot
Match: RS8_ORYSJ (40S ribosomal protein S8 OS=Oryza sativa subsp. japonica GN=RPS8 PE=2 SV=2) HSP 1 Score: 243.817 bits (621), Expect = 4.389e-64 Identity = 131/174 (75.29%), Postives = 135/174 (77.59%), Query Frame = 3 Query: 51 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXDAPA-TEEAKKSSHVLRKLEKRQKDRTLDPHIE 569 MGISRDSMH YELGRQPANTKLSSNKTVRR+RVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYL HYGVDIGR DA A TEEAKKS+HV+RKLEKRQ+ RTLD HIE Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGR---KKKAPAAKKDAEGQDAEATTEEAKKSNHVVRKLEKRQQGRTLDAHIE 171
BLAST of DN620933 vs. ExPASy Swiss-Prot
Match: RS8_PRUAR (40S ribosomal protein S8 OS=Prunus armeniaca GN=RPS8 PE=2 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 4.108e-62 Identity = 126/173 (72.83%), Postives = 131/173 (75.72%), Query Frame = 3 Query: 51 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXDAPATEEAKKSSHVLRKLEKRQKDRTLDPHIE 569 MGISRDSMH YELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGN+SWGSEAVTRKTR+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV+IGR TEEAKKS+HV KLEKRQ+ RTLD HIE Sbjct: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVEIGR---KKKTAAAKKDTPEEGEATTEEAKKSNHVAIKLEKRQQGRTLDAHIE 170
BLAST of DN620933 vs. ExPASy Swiss-Prot
Match: RS82_ARATH (40S ribosomal protein S8-2 OS=Arabidopsis thaliana GN=RPS8B PE=2 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 5.022e-60 Identity = 123/173 (71.10%), Postives = 129/173 (74.57%), Query Frame = 3 Query: 51 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXDAPATEEAKKSSHVLRKLEKRQKDRTLDPHIE 569 MGISRDS+H YELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGN+SWGSEAVTRKTRILDV YNASNNELVRTQTLVKSAIVQVDAAPFKQ YLQHYGVDIGR +A TEE KKS+HV RKLE RQ+ R LD H+E Sbjct: 1 MGISRDSIHKRRATGGKQKMWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNFSWGSEAVTRKTRILDVAYNASNNELVRTQTLVKSAIVQVDAAPFKQGYLQHYGVDIGR-------------KKKGEAVTTEEVKKSNHVQRKLEMRQEGRALDSHLE 160
BLAST of DN620933 vs. ExPASy Swiss-Prot
Match: RS81_ARATH (40S ribosomal protein S8-1 OS=Arabidopsis thaliana GN=RPS8A PE=2 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 4.251e-59 Identity = 118/174 (67.82%), Postives = 129/174 (74.14%), Query Frame = 3 Query: 51 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXDA-PATEEAKKSSHVLRKLEKRQKDRTLDPHIE 569 MGISRDS+H YE+GRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEA TRKTR+LDVVYNASNNELVRT+TLVKSAIVQVDAAPFKQWYL HYGV++GR A A EE KKS+H+LRK+ RQ+ R+LD HIE Sbjct: 1 MGISRDSIHKRRATGGKQKQWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEATTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLSHYGVELGRKKKSASSTKKDGEEGEEAAVAAPEEVKKSNHLLRKIASRQEGRSLDSHIE 174
BLAST of DN620933 vs. ExPASy Swiss-Prot
Match: RS8_DICDI (40S ribosomal protein S8 OS=Dictyostelium discoideum GN=rps8 PE=1 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 3.742e-39 Identity = 89/176 (50.57%), Postives = 109/176 (61.93%), Query Frame = 3 Query: 51 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSN---KTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXDAPATEEAKKSSHVLRKLEKRQKDRTLDPHIE 569 MGISRD++H YELGRQ A TK+ S K VR IRVRGG+ K+RALRLDTGN+SW +E +TRK RIL+VVYNA++N+LVRT TLVK +IVQ+DA P+KQWY HYGV +G+ D A + KKS+ +L KL R K R LD IE Sbjct: 1 MGISRDALHKHRLTGAARKCNYKKRKYELGRQAAKTKICSQGEEKRVRSIRVRGGHQKFRALRLDTGNFSWATEKITRKCRILNVVYNATSNDLVRTNTLVKGSIVQIDATPYKQWYETHYGVVVGK-----------KKSAKKDGEAEQVVKKSASLLAKLASRAKGRVLDSAIE 165
BLAST of DN620933 vs. ExPASy Swiss-Prot
Match: RS8_ICTPU (40S ribosomal protein S8 OS=Ictalurus punctatus GN=rps8 PE=2 SV=3) HSP 1 Score: 157.532 bits (397), Expect = 4.137e-38 Identity = 84/176 (47.73%), Postives = 108/176 (61.36%), Query Frame = 3 Query: 51 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXDAPATEE---AKKSSHVLRKLEKRQKDRTLDPHIE 569 MGISRD+ H YELGR P+NTKL K + +RVRGGN K+RALRLD GN+SWGSE TRKTRI+DVVYNASNNELVRT+TLVK+ ++ VD+APF+QWY HY + +GR P E+ K+S V +K +KR+K+ + P ++ Sbjct: 1 MGISRDNWHKRRKTGGKRKPVHKKRKYELGRPPSNTKLGP-KRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCVILVDSAPFRQWYESHYALPLGRKKGAKL------------TPEEEDILNKKRSKKVQKKFDKRRKNSKISPLLD 163
BLAST of DN620933 vs. ExPASy Swiss-Prot
Match: RS8_THEPA (40S ribosomal protein S8 OS=Theileria parva GN=RPS8 PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.738e-36 Identity = 75/124 (60.48%), Postives = 93/124 (75.00%), Query Frame = 3 Query: 51 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGR 422 MGISRDS H YELGR +NTKL S K VR++R RGGN+K+RALRLD+GN+SWGS+ VTRKTR++DVVYNAS+NELVRT+TLVK+AIV VD PFK W+ HYG+++G+ Sbjct: 1 MGISRDSRHKRRLTGGRYPVHKKKRKYELGRPSSNTKLGS-KLVRKVRCRGGNLKFRALRLDSGNFSWGSQNVTRKTRVMDVVYNASSNELVRTKTLVKNAIVTVDPTPFKLWFKTHYGLELGK 123
BLAST of DN620933 vs. ExPASy Swiss-Prot
Match: RS8_GRIJA (40S ribosomal protein S8 OS=Griffithsia japonica GN=RPS8 PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 3.872e-36 Identity = 75/124 (60.48%), Postives = 90/124 (72.58%), Query Frame = 3 Query: 51 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGR 422 MGISRDS H YELGRQPA TK+ K VR +RVRGGN+K RALRL++GN++WGSEA T K+RIL+VVYNASNNELVRT T VK I+Q+DA PF+Q+Y HYG+DIG+ Sbjct: 1 MGISRDSRHKRRLTGGKHPYTCKKRKYELGRQPAMTKIGG-KLVRTVRVRGGNLKSRALRLESGNFAWGSEAFTSKSRILNVVYNASNNELVRTNTFVKGCIIQIDATPFRQYYHNHYGIDIGK 123
BLAST of DN620933 vs. ExPASy Swiss-Prot
Match: RS8_CAEEL (40S ribosomal protein S8 OS=Caenorhabditis elegans GN=rps-8 PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 6.605e-36 Identity = 80/169 (47.34%), Postives = 103/169 (60.95%), Query Frame = 3 Query: 51 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXDAPATEEAKKSSHVLRKLEKRQKDRTLD 557 MGISRDS H +ELGR ANTK+ +++ VR +R RGGN K+RALRLD+GN+SW SE TRKTRI+D +YNA+NNELVRT+TLVK AI+ VDAAPF+QWY HY + + R + A K+S H ++K +RQK +D Sbjct: 1 MGISRDSWHKRYKTGATQPVPHKKRKFELGRPAANTKIGAHR-VRLVRTRGGNEKYRALRLDSGNFSWASEQTTRKTRIVDTMYNATNNELVRTKTLVKGAIISVDAAPFRQWYEAHYALPLAR---------KKNAKLSEEDNAILNKKRSHHTMKKYTERQKTAAVD 159 The following BLAST results are available for this feature:
BLAST of DN620933 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >DN620933 ID=DN620933; Name=DN620933; organism=Citrus sinensis; type=EST; length=571bpback to top |