DN620932
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN620932 vs. ExPASy Swiss-Prot
Match: RS8_MAIZE (40S ribosomal protein S8 OS=Zea mays GN=RPS8 PE=2 SV=2) HSP 1 Score: 232.646 bits (592), Expect = 1.097e-60 Identity = 119/144 (82.64%), Postives = 125/144 (86.81%), Query Frame = -2 Query: 160 EAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXKEGEEGDAPATEEAKKSSHVLRKLEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQR 591 EAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYL HYGVDIGR EG+E +A A EE KKS+HV RKLEKR++ RTLDPHIEEQFGSGRLLACI+SRPGQCGRADGYILEGKELEFYMKKLQR Sbjct: 71 EAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGRKKKTPAAKKDNAEGQEVEA-AAEETKKSNHVTRKLEKRKEGRTLDPHIEEQFGSGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQR 213
BLAST of DN620932 vs. ExPASy Swiss-Prot
Match: RS8_ORYSJ (40S ribosomal protein S8 OS=Oryza sativa subsp. japonica GN=RPS8 PE=2 SV=2) HSP 1 Score: 229.565 bits (584), Expect = 9.287e-60 Identity = 119/144 (82.64%), Postives = 126/144 (87.50%), Query Frame = -2 Query: 160 EAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXKEGEEGDAPATEEAKKSSHVLRKLEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQR 591 EAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYL HYGVDIGR EG++ +A TEEAKKS+HV+RKLEKRQ+ RTLD HIEEQFGSGRLLACI+SRPGQCGRADGYILEGKELEFYMKKLQR Sbjct: 71 EAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGRKKKAPAAKKDA-EGQDAEA-TTEEAKKSNHVVRKLEKRQQGRTLDAHIEEQFGSGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQR 212
BLAST of DN620932 vs. ExPASy Swiss-Prot
Match: RS8_PRUAR (40S ribosomal protein S8 OS=Prunus armeniaca GN=RPS8 PE=2 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 3.652e-56 Identity = 114/144 (79.17%), Postives = 122/144 (84.72%), Query Frame = -2 Query: 160 EAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXKEGEEGDAPATEEAKKSSHVLRKLEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQR 591 EAVTRKTR+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV+IGR E EG+A TEEAKKS+HV KLEKRQ+ RTLD HIEEQFG G+LLACI+SRPGQCG+ADG ILEGKELEFYMKKLQR Sbjct: 71 EAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVEIGRKKKTAAAKKDTPE--EGEA-TTEEAKKSNHVAIKLEKRQQGRTLDAHIEEQFGGGKLLACISSRPGQCGKADGDILEGKELEFYMKKLQR 211
BLAST of DN620932 vs. ExPASy Swiss-Prot
Match: RS82_ARATH (40S ribosomal protein S8-2 OS=Arabidopsis thaliana GN=RPS8B PE=2 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 1.388e-55 Identity = 112/144 (77.78%), Postives = 119/144 (82.64%), Query Frame = -2 Query: 160 EAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXKEGEEGDAPATEEAKKSSHVLRKLEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQR 591 EAVTRKTRILDV YNASNNELVRTQTLVKSAIVQVDAAPFKQ YLQHYGVDIGR ++G+A TEE KKS+HV RKLE RQ+ R LD H+EEQF SGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQ+ Sbjct: 71 EAVTRKTRILDVAYNASNNELVRTQTLVKSAIVQVDAAPFKQGYLQHYGVDIGRK-------------KKGEAVTTEEVKKSNHVQRKLEMRQEGRALDSHLEEQFSSGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQK 201
BLAST of DN620932 vs. ExPASy Swiss-Prot
Match: RS81_ARATH (40S ribosomal protein S8-1 OS=Arabidopsis thaliana GN=RPS8A PE=2 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 8.995e-55 Identity = 106/145 (73.10%), Postives = 119/145 (82.07%), Query Frame = -2 Query: 160 EAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXKE-GEEGDAPATEEAKKSSHVLRKLEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQR 591 EA TRKTR+LDVVYNASNNELVRT+TLVKSAIVQVDAAPFKQWYL HYGV++GR E GEE A EE KKS+H+LRK+ RQ+ R+LD HIE+QF SGRLLACI+SRPGQCGRADGYILEGKELEFYMKK+Q+ Sbjct: 71 EATTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLSHYGVELGRKKKSASSTKKDGEEGEEAAVAAPEEVKKSNHLLRKIASRQEGRSLDSHIEDQFASGRLLACISSRPGQCGRADGYILEGKELEFYMKKIQK 215
BLAST of DN620932 vs. ExPASy Swiss-Prot
Match: RS8_ICTPU (40S ribosomal protein S8 OS=Ictalurus punctatus GN=rps8 PE=2 SV=3) HSP 1 Score: 159.844 bits (403), Expect = 9.037e-39 Identity = 79/143 (55.24%), Postives = 104/143 (72.73%), Query Frame = -2 Query: 163 EAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXKEGEEGDAPATEEAKKSSHVLRKLEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQ 591 E TRKTRI+DVVYNASNNELVRT+TLVK+ ++ VD+APF+QWY HY + +GR EE D + +KK V +K +KR+K+ + P ++EQF G+LLACI+SRPGQCGRADGY+LEGKELEFY++K++ Sbjct: 70 ECCTRKTRIIDVVYNASNNELVRTKTLVKNCVILVDSAPFRQWYESHYALPLGRKKGAKLTP------EEEDILNKKRSKK---VQKKFDKRRKNSKISPLLDEQFQQGKLLACISSRPGQCGRADGYVLEGKELEFYLRKIK 203
BLAST of DN620932 vs. ExPASy Swiss-Prot
Match: RS8_DROME (40S ribosomal protein S8 OS=Drosophila melanogaster GN=RpS8 PE=1 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 9.991e-38 Identity = 79/143 (55.24%), Postives = 102/143 (71.33%), Query Frame = -2 Query: 163 EAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXKEGEEGDAPATEEAKKSSHVLRKLEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQ 591 E V RKTRI DVVYNASNNELVRT+TLVK++IV +DA PF+QWY HY + +GR ++ D K+S V++K +RQK ++ +E+QF SGR+LACI+SRPGQCGR+DGYILEGKELEFY+KK++ Sbjct: 70 EGVARKTRIADVVYNASNNELVRTKTLVKNSIVVIDATPFRQWYEAHYVLPLGRKRNPK-------HAQKEDENDVLTKKRSEKVMKKYLERQKYGKVEQALEDQFTSGRILACISSRPGQCGRSDGYILEGKELEFYLKKIK 205
BLAST of DN620932 vs. ExPASy Swiss-Prot
Match: RS8_XENLA (40S ribosomal protein S8 OS=Xenopus laevis GN=rps8 PE=2 SV=3) HSP 1 Score: 155.606 bits (392), Expect = 1.704e-37 Identity = 79/146 (54.11%), Postives = 100/146 (68.49%), Query Frame = -2 Query: 163 EAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXKEGEEGDAPATEEA---KKSSHVLRKLEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQ 591 E TRKTRI+DVVYNASNNELVRT+TLVK+ I+ VD+ PF+QW+ HY + +GR P EE K+S +K E+R+K + P +EEQF G+LLACIASRPGQCGRADGY+LEGKELEFY++K++ Sbjct: 70 ECCTRKTRIIDVVYNASNNELVRTKTLVKNCILLVDSTPFRQWFEAHYALPLGRKKGAKL------------TPEEEEILNKKRSKKTQKKYEERKKTAKISPLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIK 203
BLAST of DN620932 vs. ExPASy Swiss-Prot
Match: RS8_APIME (40S ribosomal protein S8 OS=Apis mellifera GN=RpS8 PE=2 SV=2) HSP 1 Score: 155.221 bits (391), Expect = 2.226e-37 Identity = 80/143 (55.94%), Postives = 100/143 (69.93%), Query Frame = -2 Query: 163 EAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXKEGEEGDAPATEEAKKSSHVLRKLEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQ 591 E TRKTRI+DVVYNASNNELVRT+TLVK+AIV +DA PF+QWY HY + +GR E EE K+S K + RQ+ ++P +EEQF +GR+LACI+SRPGQCGR DGYILEGKELEFYM++++ Sbjct: 70 ECTTRKTRIIDVVYNASNNELVRTKTLVKNAIVTIDATPFRQWYEGHYVLPLGRKRGAKLT-----EAEE----EVLNKKRSKKAEAKYKARQRFAKVEPALEEQFATGRVLACISSRPGQCGREDGYILEGKELEFYMRRIK 203
BLAST of DN620932 vs. ExPASy Swiss-Prot
Match: RS8_RAT (40S ribosomal protein S8 OS=Rattus norvegicus GN=Rps8 PE=1 SV=2) HSP 1 Score: 154.836 bits (390), Expect = 2.907e-37 Identity = 77/146 (52.74%), Postives = 101/146 (69.18%), Query Frame = -2 Query: 163 EAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXKEGEEGDAPATEEA---KKSSHVLRKLEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQ 591 E TRKTRI+DVVYNASNNELVRT+TLVK+ IV +D+ P++QWY HY + +GR P EE K+S + +K ++R+K+ + +EEQF G+LLACIASRPGQCGRADGY+LEGKELEFY++K++ Sbjct: 70 ECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKL------------TPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIK 203 The following BLAST results are available for this feature:
BLAST of DN620932 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >DN620932 ID=DN620932; Name=DN620932; organism=Citrus sinensis; type=EST; length=592bpback to top |