DN620931

Overview
NameDN620931
Unique NameDN620931
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length800
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN620931 vs. ExPASy Swiss-Prot
Match: PHG1B_DICDI (Putative phagocytic receptor 1b OS=Dictyostelium discoideum GN=phg1b PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.070e-11
Identity = 31/72 (43.06%), Postives = 46/72 (63.89%), Query Frame = -2
Query:  284 SFLCSGSTGVFIXXXXXXXXXXXLDMSGFMQTSFFFGYMACICYGFFLMLGTIGF*ASLLFVRHIYRSIKCE 499
            SF+  GST VFI             M G +Q +F+F YM  +C+ FF++LGT+GF +SL+FV+ IYR++K +
Sbjct:  516 SFINGGSTVVFIYMYSIYYYYYISHMYGLLQATFYFTYMLIVCFFFFILLGTVGFYSSLIFVKRIYRNLKSD 587          
The following BLAST results are available for this feature:
BLAST of DN620931 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PHG1B_DICDI8.070e-1143.06Putative phagocytic receptor 1b OS=Dictyostelium d... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_06A05_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN620931 ID=DN620931; Name=DN620931; organism=Citrus sinensis; type=EST; length=800bp
TTTTTTTTTTTTTTTATCAAAGTACGACGGAAGCGAGTAATATATTCCAT
CACAAATATGAAAGTATTTAAACAAAAATACAATGGGCAAGTTACAAGTA
ATAAGAAGAAAGCACAAGGTCTCTTAAACAATACATGAACAAAAATACTA
AAATAAAATAGCAACATGATTAACTCTTAAAACCCTACACTTAACGCCTA
ACATGTGTGTGTAAGTCTTTGTGAGGATCTCTATCATCTTTCTCCATGAT
AAAGTCAAGAGGCCAAAAAGAACCAAGCCACTACTCACACTTGATCGATC
TGTATATATGTCGGACAAATAGCAGAGAGGCTCAGAAACCAATCGTCCCA
AGCATAAGAAAGAAGCCATAGCAAATACAAGCCATGTACCCAAAGAAGAA
TGAGGTCTGCATAAACCCAGACATATCTAAACATGCATAATAATAGTACA
AGCAGTATGCATAGATGAAAACGCCAGTAGATCCACTACAAAGGAAAGAT
CTGTGTCAATATTAAGATTACAGATCAGTTTAAAGGACATTAAAGTTTAT
TCCAAGTTTGATTAGTTTGGAGAAAAAAACAAAATACATAATAAGTTTGC
TAAGTAGATAAAATATGAAGACTAACTGTAAATCCCCTCTCCAAAGTGGT
AGAGGCGTAATAAAAATCTGATGTAGCAATTCTAATCCCCAAGCTAGATT
CACTCTATAGCTAATATAAAGACAGCTGGAGATACCGCTCTTATTCTACT
ATTGGCATCAATTTAAACATGATGAAACTCAAGTGTTGTGCTCATTATGT
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