DN620884
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN620884 vs. ExPASy Swiss-Prot
Match: CUL3A_XENLA (Cullin-3-A OS=Xenopus laevis GN=cul3a PE=1 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 7.205e-38 Identity = 88/155 (56.77%), Postives = 112/155 (72.26%), Query Frame = -2 Query: 120 NSIDRLSYKEIEQATEIPAPELKRCLQSLACVKG-KHVFWKEPMSKDIAEDDAFFFNDKFTSKFVKVKIGTVVA-QREFEPENQETRQRVGEDRKPQIEAAIVRIMKARRVLDPNNIVTEVPKQLQFRFLPNPVVIKKRIESLIEREFLERDKVD 578 N+ D+ +++EI+Q T+IP EL R LQSLAC K + V KEP SK+I F ND+FTSK +VKI TV A Q E +PE +ETRQ+V +DRK +IEAAIVRIMK+R+ + N +V EV +QL+ RFLP+PVVIKKRIE LIERE+L R D Sbjct: 606 NNRDKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPED 760
BLAST of DN620884 vs. ExPASy Swiss-Prot
Match: CUL3_XENTR (Cullin-3 OS=Xenopus tropicalis GN=cul3 PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.096e-37 Identity = 87/155 (56.13%), Postives = 112/155 (72.26%), Query Frame = -2 Query: 120 NSIDRLSYKEIEQATEIPAPELKRCLQSLACVKG-KHVFWKEPMSKDIAEDDAFFFNDKFTSKFVKVKIGTVVA-QREFEPENQETRQRVGEDRKPQIEAAIVRIMKARRVLDPNNIVTEVPKQLQFRFLPNPVVIKKRIESLIEREFLERDKVD 578 N+ ++ +++EI+Q T+IP EL R LQSLAC K + V KEP SK+I F ND+FTSK +VKI TV A Q E +PE +ETRQ+V +DRK +IEAAIVRIMK+R+ + N +V EV +QL+ RFLP+PVVIKKRIE LIERE+L R D Sbjct: 606 NNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPED 760
BLAST of DN620884 vs. ExPASy Swiss-Prot
Match: CUL3_MOUSE (Cullin-3 OS=Mus musculus GN=Cul3 PE=1 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.096e-37 Identity = 87/155 (56.13%), Postives = 112/155 (72.26%), Query Frame = -2 Query: 120 NSIDRLSYKEIEQATEIPAPELKRCLQSLACVKG-KHVFWKEPMSKDIAEDDAFFFNDKFTSKFVKVKIGTVVA-QREFEPENQETRQRVGEDRKPQIEAAIVRIMKARRVLDPNNIVTEVPKQLQFRFLPNPVVIKKRIESLIEREFLERDKVD 578 N+ ++ +++EI+Q T+IP EL R LQSLAC K + V KEP SK+I F ND+FTSK +VKI TV A Q E +PE +ETRQ+V +DRK +IEAAIVRIMK+R+ + N +V EV +QL+ RFLP+PVVIKKRIE LIERE+L R D Sbjct: 606 NNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIESGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPED 760
BLAST of DN620884 vs. ExPASy Swiss-Prot
Match: CUL3_HUMAN (Cullin-3 OS=Homo sapiens GN=CUL3 PE=1 SV=2) HSP 1 Score: 155.221 bits (391), Expect = 2.096e-37 Identity = 87/155 (56.13%), Postives = 112/155 (72.26%), Query Frame = -2 Query: 120 NSIDRLSYKEIEQATEIPAPELKRCLQSLACVKG-KHVFWKEPMSKDIAEDDAFFFNDKFTSKFVKVKIGTVVA-QREFEPENQETRQRVGEDRKPQIEAAIVRIMKARRVLDPNNIVTEVPKQLQFRFLPNPVVIKKRIESLIEREFLERDKVD 578 N+ ++ +++EI+Q T+IP EL R LQSLAC K + V KEP SK+I F ND+FTSK +VKI TV A Q E +PE +ETRQ+V +DRK +IEAAIVRIMK+R+ + N +V EV +QL+ RFLP+PVVIKKRIE LIERE+L R D Sbjct: 606 NNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIENGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPED 760
BLAST of DN620884 vs. ExPASy Swiss-Prot
Match: CUL3B_XENLA (Cullin-3-B OS=Xenopus laevis GN=cul3b PE=1 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.096e-37 Identity = 87/155 (56.13%), Postives = 112/155 (72.26%), Query Frame = -2 Query: 120 NSIDRLSYKEIEQATEIPAPELKRCLQSLACVKG-KHVFWKEPMSKDIAEDDAFFFNDKFTSKFVKVKIGTVVA-QREFEPENQETRQRVGEDRKPQIEAAIVRIMKARRVLDPNNIVTEVPKQLQFRFLPNPVVIKKRIESLIEREFLERDKVD 578 N+ ++ +++EI+Q T+IP EL R LQSLAC K + V KEP SK+I F ND+FTSK +VKI TV A Q E +PE +ETRQ+V +DRK +IEAAIVRIMK+R+ + N +V EV +QL+ RFLP+PVVIKKRIE LIERE+L R D Sbjct: 606 NNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPED 760
BLAST of DN620884 vs. ExPASy Swiss-Prot
Match: CUL3_CAEEL (Cullin-3 OS=Caenorhabditis elegans GN=cul-3 PE=1 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 2.031e-32 Identity = 76/155 (49.03%), Postives = 108/155 (69.68%), Query Frame = -2 Query: 120 NSIDRLSYKEIEQATEIPAPELKRCLQSLACVKG-KHVFWKEPMSKDIAE-DDAFFFNDKFTSKFVKVKIGTVVAQREFEPENQETRQRVGEDRKPQIEAAIVRIMKARRVLDPNNIVTEVPKQLQFRFLPNPVVIKKRIESLIEREFLERDKVD 578 N +R+S +++ +IP ELKR LQSLA K + + ++ KD + D F ND F SK +VK+ V + E EPE +ETRQ+V +DRK ++EAAIVRIMKAR+ L+ NN+V EV +QL+ RF+P+P++IK+RIE+LIERE+L RD+ D Sbjct: 615 NHHNRISCQQLMDELKIPERELKRNLQSLALGKASQRILVRKNKGKDAIDMSDEFAVNDNFQSKLTRVKVQMVTGKVESEPEIRETRQKVEDDRKLEVEAAIVRIMKARKKLNHNNLVAEVTQQLRHRFMPSPIIIKQRIETLIEREYLARDEHD 769
BLAST of DN620884 vs. ExPASy Swiss-Prot
Match: CUL3_DICDI (Cullin-3 OS=Dictyostelium discoideum GN=culC PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 5.908e-32 Identity = 86/186 (46.24%), Postives = 108/186 (58.06%), Query Frame = -2 Query: 120 NSIDRLSYKEIEQATEIPAPELKRCLQSLACVKGKHVFWKEPM---------------------------------SKDIAEDDAFFFNDKFTSKFVKVKIGTVVAQREFEPENQETRQRVGEDRKPQIEAAIVRIMKARRVLDPNNIVTEVPKQLQFRFLPNPVVIKKRIESLIEREFLERDKVD 578 N +L++KEI T IP +LKR L +L K K + + P SK I E D F FN KF SK +VK+ VV Q+E E +ETR +V EDRK QIEA+IVRIMKAR+ L+ +N+V+EV KQLQ RF+PNPV++KKRIESLIERE+LER K D Sbjct: 577 NDQSKLTFKEIADQTGIPTIDLKRNLLALTNPKNKILDRELPSTTSSTTTTTTTATSSSTSTSPSSSSSSISTPTPSKSIDESDVFAFNTKFKSKLFRVKVMAVV-QKETPVEEKETRDKVDEDRKHQIEASIVRIMKARKTLEHSNLVSEVIKQLQSRFVPNPVIVKKRIESLIEREYLERSKQD 761
BLAST of DN620884 vs. ExPASy Swiss-Prot
Match: CUL3_SCHPO (Cullin-3 OS=Schizosaccharomyces pombe GN=cul3 PE=1 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 1.779e-28 Identity = 66/145 (45.52%), Postives = 97/145 (66.90%), Query Frame = -2 Query: 132 LSYKEIEQATEIPAPELKRCLQSLACVKGKHVFWKEPMSKDIAEDDAFFFNDKFTSKFVKVKIGTVVAQR-EFEPENQETRQRVGEDRKPQIEAAIVRIMKARRVLDPNNIVTEVPKQLQFRFLPNPVVIKKRIESLIEREFLER 563 L ++EI + T I +LKR LQSLAC K K + K+P +++ D F+FN+ F S ++KI TV R E + E + T ++V E RK Q +A IVR+MK R+V + N ++ EV +QL RF P+P++IK+RIE+LIERE+L+R Sbjct: 630 LIFEEILEKTNIEVGDLKRNLQSLACAKYK-ILLKDPKGREVNAGDKFYFNENFVSNLARIKISTVAQTRVEDDSERKRTLEKVDESRKHQADACIVRVMKDRKVCEHNQLMAEVTRQLNPRFHPSPMMIKRRIEALIEREYLQR 773
BLAST of DN620884 vs. ExPASy Swiss-Prot
Match: CUL4B_HUMAN (Cullin-4B OS=Homo sapiens GN=CUL4B PE=1 SV=3) HSP 1 Score: 120.168 bits (300), Expect = 7.474e-27 Identity = 72/151 (47.68%), Postives = 95/151 (62.91%), Query Frame = -2 Query: 126 NSIDRLSYKEIEQATEIPAPELKRCLQSLACVKGKHVFWKEPMSKDIAEDDAFFFNDKFTSKFVKVKIGTVVAQREFEPENQETRQRVGEDRKPQIEAAIVRIMKARRVLDPNNIVTEVPKQLQFRFLPNPVVIKKRIESLIEREFLERDK 578 N + S +EI+QAT I EL+R LQSLAC K + V K P KDI + D F ND F K ++KI + + E E T +RV +DR+ QI+AAIVRIMK R+ L N +V+EV QL+F P +KKRIESLI+R+++ERDK Sbjct: 739 NEGEEFSLEEIKQATGIEDGELRRTLQSLACGKAR-VLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVE-EQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPV--KPADLKKRIESLIDRDYMERDK 885
BLAST of DN620884 vs. ExPASy Swiss-Prot
Match: CUL4A_HUMAN (Cullin-4A OS=Homo sapiens GN=CUL4A PE=1 SV=3) HSP 1 Score: 118.242 bits (295), Expect = 2.840e-26 Identity = 69/151 (45.70%), Postives = 96/151 (63.58%), Query Frame = -2 Query: 126 NSIDRLSYKEIEQATEIPAPELKRCLQSLACVKGKHVFWKEPMSKDIAEDDAFFFNDKFTSKFVKVKIGTVVAQREFEPENQETRQRVGEDRKPQIEAAIVRIMKARRVLDPNNIVTEVPKQLQFRFLPNPVVIKKRIESLIEREFLERDK 578 N D S++EI+ AT I EL+R LQSLAC K + V K P K++ + D F FN +F K ++KI + + E E T +RV +DR+ QI+AAIVRIMK R+ L N +V+E+ QL+F P +KKRIESLI+R+++ERDK Sbjct: 603 NEGDGFSFEEIKMATGIEDSELRRTLQSLACGKAR-VLIKSPKGKEVEDGDKFIFNGEFKHKLFRIKINQIQMKETVE-EQVSTTERVFQDRQYQIDAAIVRIMKMRKTLGHNLLVSELYNQLKFPVKPGD--LKKRIESLIDRDYMERDK 749 The following BLAST results are available for this feature:
BLAST of DN620884 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
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Sequences
The
following sequences are available for this feature:
EST sequence >DN620884 ID=DN620884; Name=DN620884; organism=Citrus sinensis; type=EST; length=579bpback to top |