FC922050

Overview
NameFC922050
Unique NameFC922050
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length765
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC922050 vs. ExPASy Swiss-Prot
Match: LST8_DICDI (Protein LST8 homolog OS=Dictyostelium discoideum GN=lst8 PE=1 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.191e-56
Identity = 107/186 (57.53%), Postives = 131/186 (70.43%), Query Frame = 1
Query:    1 TVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGAYLITASSDATARLWSMSTGEDIRVYQGHHKATICCALHD 558
            TVVLHPNQ ELISGDQNG+IRVWDL +N+CS ELVP+ +  + SLT+  DG LVVA+N  G C+VWRL  G    + FEPL K++AHN  ILK L SP+     + LAT S+DHTVKIWN   F + +TL GHQRWVWDC FS D AYL+T SSD  +RLW +  G+ ++ Y GH KA    AL+D
Sbjct:  122 TVVLHPNQAELISGDQNGSIRVWDLISNTCSRELVPDGEVGITSLTISSDGGLVVASNTKGKCFVWRL--GEDDTSRFEPLQKIEAHNAPILKTLFSPDT----KLLATCSADHTVKIWNTKKFNVVQTLNGHQRWVWDCAFSNDSAYLVTGSSDHLSRLWDLHQGDAVKTYSGHIKAVNAVALND 301          
BLAST of FC922050 vs. ExPASy Swiss-Prot
Match: WAT1_SCHPO (WD repeat-containing protein wat1 OS=Schizosaccharomyces pombe GN=wat1 PE=1 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.902e-54
Identity = 100/187 (53.48%), Postives = 132/187 (70.59%), Query Frame = 1
Query:    4 VVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVD--GFTLEKTLIGHQRWVWDCVFSVDGAYLITASSDATARLWSMSTGEDIRVYQGHHKATICCALHD 558
            +++HPNQ EL+S DQ+G +R WDL  NSC+ EL+PE D  + S+TV  DGS+++A NN G CYVWR++   Q  +  +P+ K QAH  YI +C+LSP+     ++LAT S+D TV IW+ +   F LE+ L GHQRWVWDC FS D  YL+TASSD  ARLW +S+GE IR Y GHHKA +C AL+D
Sbjct:  130 LLIHPNQGELLSCDQSGRVRAWDLGENSCTHELIPEEDVPMSSITVGSDGSMLIAGNNKGNCYVWRMLNH-QGASLLQPVVKFQAHQRYITRCVLSPDV----KHLATCSADATVNIWSTEDMSFMLERRLQGHQRWVWDCAFSADSTYLVTASSDHVARLWELSSGETIRQYSGHHKAAVCVALND 311          
BLAST of FC922050 vs. ExPASy Swiss-Prot
Match: LST8_YEAST (Target of rapamycin complex subunit LST8 OS=Saccharomyces cerevisiae GN=LST8 PE=1 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 7.992e-53
Identity = 98/186 (52.69%), Postives = 132/186 (70.97%), Query Frame = 1
Query:    4 VVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDG-FTLEKTLIGHQRWVWDCVFSVDGAYLITASSDATARLWSMSTGEDIRVYQGHHKATICCALHD 558
            VV+HPNQ ELIS D++GNIR+WDL  N C+ +L PE DT+++SL++  DGS++ AAN  G CYVW +   T   ++ +P+ K +AH+ YI + LLS +     ++LAT S+DHT ++W++D  F LE TL GHQRWVWDC FS D AYL+TASSD   RLW +ST E +R Y GHHK  +C AL+D
Sbjct:  122 VVIHPNQGELISCDRDGNIRIWDLGENQCTHQLTPEDDTSLQSLSMASDGSMLAAANTKGNCYVWEMPNHTDA-SHLKPVTKFRAHSTYITRILLSSDV----KHLATCSADHTARVWSIDDDFKLETTLDGHQRWVWDCAFSADSAYLVTASSDHYVRLWDLSTREIVRQYGGHHKGAVCVALND 302          
BLAST of FC922050 vs. ExPASy Swiss-Prot
Match: LST8_DROME (Protein LST8 homolog OS=Drosophila melanogaster GN=CG3004 PE=1 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 9.484e-38
Identity = 78/183 (42.62%), Postives = 102/183 (55.74%), Query Frame = 1
Query:   10 LHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGAYLITASSDATARLWSMSTGEDIRVYQGHHKATICCALHD 558
            LHPNQ E+  G QNG++ +WD+ +      +VPEVD +++ + +  DG  + AANN G CY+W L    Q M+   P  K+ AH+ YIL+C  SP+     R L T S D TV IW  D F+  + L     WVWD  FS D  +L TASSD  ARLW + T   IR Y GH KA    +  D
Sbjct:  131 LHPNQVEIAMGSQNGSVFLWDVKSERHE-RIVPEVDASIQDVAISPDGRYLAAANNKGNCYIWSLTSQDQKMSTLRPNRKIPAHSRYILRCKFSPD----SRLLLTTSGDGTVCIWKTDDFSKWRELCIENYWVWDAAFSADSKWLFTASSDGIARLWKLQTKSSIRDYTGHTKAITALSFKD 308          
BLAST of FC922050 vs. ExPASy Swiss-Prot
Match: LST8_DANRE (Target of rapamycin complex subunit lst8 OS=Danio rerio GN=mlst8 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 9.484e-38
Identity = 85/194 (43.81%), Postives = 108/194 (55.67%), Query Frame = 1
Query:    4 VVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGT-QTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLI--------GHQRWVWDCVFSVDGAYLITASSDATARLWSMSTGEDIRVYQGHHKATICCALHD 558
            V LHPNQ ELI GDQ+G I +WDL  +    +L+PE D +V S+ +  D S + A N+ G CYVW L  G    +T   P  K+ AH  Y L+C  SP+       LAT S+D T KIW    F+L   L           + W+WDC FS D  Y++TASSD  ARLW + TGE  R Y GH KA +C A +D
Sbjct:  134 VCLHPNQAELIVGDQSGVIHIWDLKTDHNE-QLIPEPDVSVNSVHIDPDASYMAAVNSSGNCYVWNLAGGMGDEVTQLIPKTKIPAHKRYSLRCKFSPD----STLLATCSADQTCKIWRTSNFSLMTELSIKSNNPGETSRGWMWDCAFSGDSQYIVTASSDNLARLWCVETGEIKREYSGHQKAVVCLAFND 322          
BLAST of FC922050 vs. ExPASy Swiss-Prot
Match: LST8_XENTR (Target of rapamycin complex subunit lst8 OS=Xenopus tropicalis GN=mlst8 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.113e-37
Identity = 83/194 (42.78%), Postives = 108/194 (55.67%), Query Frame = 1
Query:    4 VVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGT-QTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLI--------GHQRWVWDCVFSVDGAYLITASSDATARLWSMSTGEDIRVYQGHHKATICCALHD 558
            V LHPNQ ELI GDQ+G I +WDL  +    +L+PE D ++ S+ +  D S + A N+ G C+VW L  G  + +T   P  K+ AH    LKC  SP+       LAT S+D T KIW    F+L   L           + W+WDC FS D  Y++TASSD  ARLW + TGE  R Y GH KA +C A +D
Sbjct:  134 VFLHPNQAELIVGDQSGAIHIWDLKTDQNE-QLIPETDVSINSVHIDPDASYMAAVNSSGNCFVWNLTGGLGEDLTQLIPKTKIPAHKRCALKCKFSPD----STLLATCSADQTCKIWRTSNFSLMTELSIKSNNPGETSRGWMWDCAFSGDSQYIVTASSDNLARLWCVETGEIKREYSGHQKAVVCLAFND 322          
BLAST of FC922050 vs. ExPASy Swiss-Prot
Match: LST8_XENLA (Target of rapamycin complex subunit lst8 OS=Xenopus laevis GN=mlst8 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.113e-37
Identity = 83/194 (42.78%), Postives = 108/194 (55.67%), Query Frame = 1
Query:    4 VVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGT-QTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLI--------GHQRWVWDCVFSVDGAYLITASSDATARLWSMSTGEDIRVYQGHHKATICCALHD 558
            V LHPNQ ELI GDQ+G I +WDL  +    +L+PE D ++ S+ +  D S + A N+ G C+VW L  G  + +T   P  K+ AH    LKC  SP+       LAT S+D T KIW    F+L   L           + W+WDC FS D  Y++TASSD  ARLW + TGE  R Y GH KA +C A +D
Sbjct:  134 VFLHPNQAELIVGDQSGAIHIWDLKTDQNE-QLIPETDVSINSVHIDPDASYMAAVNSSGNCFVWNLTGGLGEDLTQLIPKTKIPAHKRCALKCKFSPD----STLLATCSADQTCKIWRTSNFSLMTELSIKSNNPGETSRGWMWDCAFSGDSQYIVTASSDNLARLWCVETGEIKREYSGHQKAVVCLAFND 322          
BLAST of FC922050 vs. ExPASy Swiss-Prot
Match: LST8_DROPS (Protein LST8 homolog OS=Drosophila pseudoobscura pseudoobscura GN=GA15597 PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.049e-36
Identity = 77/184 (41.85%), Postives = 100/184 (54.35%), Query Frame = 1
Query:   10 LHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGT-QTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGAYLITASSDATARLWSMSTGEDIRVYQGHHKATICCALHD 558
            LHPNQ E+  G QNGN+ +WD+ +    C +VPEVD +++ + +  DG  + AANN G CY+W L     Q M+   P  K+QAH  YIL+C  SP+     R L T S D T  +W    F+  + L     WVWD  FS D  +L TASSD  ARLW + T    R Y GH KA    +  D
Sbjct:  129 LHPNQVEIGMGSQNGNVFLWDVKSEKHEC-IVPEVDASIQDVAISPDGHYLAAANNKGNCYIWSLCSSPDQKMSTMRPTKKIQAHTRYILRCKFSPD----SRLLLTTSGDGTACLWKTSDFSKWRELCIENYWVWDAAFSADSKWLFTASSDGVARLWKLETKTPTREYTGHTKAITALSFKD 307          
BLAST of FC922050 vs. ExPASy Swiss-Prot
Match: LST8_MOUSE (Target of rapamycin complex subunit LST8 OS=Mus musculus GN=Mlst8 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.985e-36
Identity = 82/194 (42.27%), Postives = 107/194 (55.15%), Query Frame = 1
Query:    4 VVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGT-QTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLI--------GHQRWVWDCVFSVDGAYLITASSDATARLWSMSTGEDIRVYQGHHKATICCALHD 558
            V LHPNQ ELI GDQ+G I +WDL  +    +L+PE ++++ S  +  D S + A N+ G CYVW L  G    +T   P  K+ AH  Y L+C  SP+       LAT S+D T KIW    F+L   L           + W+W C FS D  Y++TASSD  ARLW + TGE  R Y GH KA +C A +D
Sbjct:  134 VCLHPNQAELIVGDQSGAIHIWDLKTDHNE-QLIPEPESSITSAHIDPDASYMAAVNSAGNCYVWNLTGGIGDDVTQLIPKTKIPAHTRYALQCRFSPD----STLLATCSADQTCKIWRTSNFSLMTELSIKSSNPGESSRGWMWGCAFSGDSQYIVTASSDNLARLWCVETGEIKREYGGHQKAVVCLAFND 322          
BLAST of FC922050 vs. ExPASy Swiss-Prot
Match: LST8_HUMAN (Target of rapamycin complex subunit LST8 OS=Homo sapiens GN=MLST8 PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 5.204e-36
Identity = 82/194 (42.27%), Postives = 106/194 (54.64%), Query Frame = 1
Query:    4 VVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGT-QTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLI--------GHQRWVWDCVFSVDGAYLITASSDATARLWSMSTGEDIRVYQGHHKATICCALHD 558
            V LHPNQ ELI GDQ+G I +WDL  +    +L+PE + ++ S  +  D S + A N+ G CYVW L  G    +T   P  K+ AH  Y L+C  SP+       LAT S+D T KIW    F+L   L           + W+W C FS D  Y++TASSD  ARLW + TGE  R Y GH KA +C A +D
Sbjct:  134 VCLHPNQAELIVGDQSGAIHIWDLKTDHNE-QLIPEPEVSITSAHIDPDASYMAAVNSTGNCYVWNLTGGIGDEVTQLIPKTKIPAHTRYALQCRFSPD----STLLATCSADQTCKIWRTSNFSLMTELSIKSGNPGESSRGWMWGCAFSGDSQYIVTASSDNLARLWCVETGEIKREYGGHQKAVVCLAFND 322          
The following BLAST results are available for this feature:
BLAST of FC922050 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
LST8_DICDI1.191e-5657.53Protein LST8 homolog OS=Dictyostelium discoideum G... [more]
WAT1_SCHPO1.902e-5453.48WD repeat-containing protein wat1 OS=Schizosacchar... [more]
LST8_YEAST7.992e-5352.69Target of rapamycin complex subunit LST8 OS=Saccha... [more]
LST8_DROME9.484e-3842.62Protein LST8 homolog OS=Drosophila melanogaster GN... [more]
LST8_DANRE9.484e-3843.81Target of rapamycin complex subunit lst8 OS=Danio ... [more]
LST8_XENTR2.113e-3742.78Target of rapamycin complex subunit lst8 OS=Xenopu... [more]
LST8_XENLA2.113e-3742.78Target of rapamycin complex subunit lst8 OS=Xenopu... [more]
LST8_DROPS1.049e-3641.85Protein LST8 homolog OS=Drosophila pseudoobscura p... [more]
LST8_MOUSE3.985e-3642.27Target of rapamycin complex subunit LST8 OS=Mus mu... [more]
LST8_HUMAN5.204e-3642.27Target of rapamycin complex subunit LST8 OS=Homo s... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1DA01RM1 SLH Citrus sinensis cDNA clone KN0AAM1DA01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC922050 ID=FC922050; Name=FC922050; organism=Citrus sinensis; type=EST; length=765bp
ACTGTTGTATTGCACCCAAATCAGACTGAACTGATATCTGGCGACCAAAA
TGGGAATATTCGTGTGTGGGATTTGACAGCAAATTCTTGCAGTTGTGAAC
TGGTGCCAGAGGTAGATACAGCTGTTAGGTCTTTAACAGTTATGTGGGAC
GGAAGCCTGGTAGTTGCTGCTAATAACCATGGAACATGTTATGTTTGGCG
CTTGATGCGTGGGACTCAGACTATGACCAACTTTGAGCCACTTCATAAAC
TACAAGCACATAATGGATACATCCTGAAATGTCTCCTTTCTCCAGAGTTT
TGTGAACCCCACAGATATCTGGCCACTGCATCTTCTGACCACACTGTCAA
GATTTGGAATGTTGATGGTTTCACATTAGAAAAAACCTTGATAGGACATC
AACGATGGGTATGGGACTGTGTTTTCTCTGTAGATGGTGCCTATCTCATA
ACAGCCTCTTCTGATGCGACAGCAAGACTATGGTCTATGTCAACCGGTGA
AGACATCAGAGTGTATCAAGGACACCACAAAGCAACCATTTGTTGTGCTC
TCCATGACGGAGCTGAACCCTCTGCCTCTTGAACCTANAATCTGACATCA
GCTTGGATCAAGGGCACCACCATGCAAACATTTATCATCCTCTCCCTGAT
GCAGCTGAATCTGTACGACTTGAACCTAGATTCTGTTTTGGCTCTCTGGT
GATTGTGAGTGCATAATAACAACAGCTTGGATCAAGGGCACCACCATGCA
AACATTTATCATCCT
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