EG358240

Overview
NameEG358240
Unique NameEG358240
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length331
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6854 contig Csv1_Contig6854:1..331. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHSY_BETVE (Chalcone synthase OS=Betula verrucosa GN=CHS PE=2 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 5.726e-27
Identity = 59/69 (85.51%), Postives = 63/69 (91.30%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGKEAAT+AIKEWGQPKSKITHLVFCTTSGVDMPGADY+LTKLLGLRPSVKRLMMY     AG TV+
Sbjct:  103 PKLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVL 171
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS3_CAMSI (Chalcone synthase 3 OS=Camellia sinensis GN=CHS3 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.726e-27
Identity = 59/69 (85.51%), Postives = 63/69 (91.30%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGKEAAT+AIKEWGQPKSKITHLVFCTTSGVDMPGADY+LTKLLGLRPSVKRLMMY     AG TV+
Sbjct:  103 PKLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVL 171
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS2_CAMSI (Chalcone synthase 2 OS=Camellia sinensis GN=CHS2 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.726e-27
Identity = 59/69 (85.51%), Postives = 63/69 (91.30%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGKEAAT+AIKEWGQPKSKITHLVFCTTSGVDMPGADY+LTKLLGLRPSVKRLMMY     AG TV+
Sbjct:  103 PKLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVL 171
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS1_CAMSI (Chalcone synthase 1 OS=Camellia sinensis GN=CHS1 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.726e-27
Identity = 59/69 (85.51%), Postives = 63/69 (91.30%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGKEAAT+AIKEWGQPKSKITHLVFCTTSGVDMPGADY+LTKLLGLRPSVKRLMMY     AG TV+
Sbjct:  103 PKLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVL 171
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHSY_HYDMC (Chalcone synthase OS=Hydrangea macrophylla GN=CHS PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 7.479e-27
Identity = 59/69 (85.51%), Postives = 62/69 (89.86%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGKEAAT AIKEWGQPKSKITHLVFCTTSGVDMPGADY+LTKLLGLRPSVKRLMMY     AG TV+
Sbjct:  103 PKLGKEAATRAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVL 171
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS7_PICMA (Chalcone synthase 7 OS=Picea mariana GN=CSF7 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.666e-26
Identity = 57/69 (82.61%), Postives = 63/69 (91.30%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            PRLGKEAAT+AIKEWGQPKSKITH++FCTTSGVDMPGADY+LTKLLGLRPSVKR+MMY     AG TV+
Sbjct:  108 PRLGKEAATKAIKEWGQPKSKITHVIFCTTSGVDMPGADYQLTKLLGLRPSVKRVMMYQQGCFAGGTVL 176
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHSY_HYPAN (Chalcone synthase OS=Hypericum androsaemum PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.176e-26
Identity = 58/69 (84.06%), Postives = 62/69 (89.86%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGKEAA +AIKEWGQPKSKITHLVFCTTSGVDMPGADY+LTKLLGLRPSVKRLMMY     AG TV+
Sbjct:  103 PKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVL 171
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHSY_CARAN (Chalcone synthase OS=Cardamine amara GN=CHS PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.176e-26
Identity = 58/69 (84.06%), Postives = 62/69 (89.86%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGKEAA +AIKEWGQPKSKITHLVFCTTSGVDMPGADY+LTKLLGLRPSVKRLMMY     AG TV+
Sbjct:  108 PKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVL 176
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHSY_CALCH (Chalcone synthase OS=Callistephus chinensis GN=CHS PE=2 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 2.176e-26
Identity = 57/69 (82.61%), Postives = 62/69 (89.86%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGKEAAT+AIKEWGQPKSKITHL+FCTTSGVDMPGADY+LTKLLGLRPSVKR MMY     AG TV+
Sbjct:  106 PKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVL 174
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS1_CASGL (Chalcone synthase OS=Casuarina glauca GN=CHS1 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.176e-26
Identity = 58/69 (84.06%), Postives = 62/69 (89.86%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGKEAA +AIKEWGQPKSKITHLVFCTTSGVDMPGADY+LTKLLGLRPSVKRLMMY     AG TV+
Sbjct:  103 PKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVL 171
The following BLAST results are available for this feature:
BLAST of EG358240 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CHSY_BETVE5.726e-2785.51Chalcone synthase OS=Betula verrucosa GN=CHS PE=2 ... [more]
CHS3_CAMSI5.726e-2785.51Chalcone synthase 3 OS=Camellia sinensis GN=CHS3 P... [more]
CHS2_CAMSI5.726e-2785.51Chalcone synthase 2 OS=Camellia sinensis GN=CHS2 P... [more]
CHS1_CAMSI5.726e-2785.51Chalcone synthase 1 OS=Camellia sinensis GN=CHS1 P... [more]
CHSY_HYDMC7.479e-2785.51Chalcone synthase OS=Hydrangea macrophylla GN=CHS ... [more]
CHS7_PICMA1.666e-2682.61Chalcone synthase 7 OS=Picea mariana GN=CSF7 PE=2 ... [more]
CHSY_HYPAN2.176e-2684.06Chalcone synthase OS=Hypericum androsaemum PE=1 SV... [more]
CHSY_CARAN2.176e-2684.06Chalcone synthase OS=Cardamine amara GN=CHS PE=3 S... [more]
CHSY_CALCH2.176e-2682.61Chalcone synthase OS=Callistephus chinensis GN=CHS... [more]
CHS1_CASGL2.176e-2684.06Chalcone synthase OS=Casuarina glauca GN=CHS1 PE=2... [more]

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Properties
Property NameValue
Genbank description12h4 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0012h4, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358240 ID=EG358240; Name=EG358240; organism=Citrus sinensis; type=EST; length=331bp
ACCGAGGCTCGGCAAAGAAGCGGCCACCGAGGCCATTAAAGAATGGGGCC
AGCCCAAGTCCAAAATCACCCACTTGGTCTTTTGCACCACTAGTGGAGTT
GACATGCCCGGGGCCGATTACCGGCTCACAAAACTATTGGGCCTTCGCCC
ATCCGTCAAACGTCTCATGATGTACGCGGGGAACACAGTCATTCCGTCTT
TCTATATCTTCTAGAAAATCCCGATGGCTTCTCGTTACGAAGTGGAAGTG
ACGATCACCTCCGCCAAGGACCTCAAGAACGTCAACTGGCGCCACGGCCC
CAACAGGCCGTACCTCGGCCGCGACCACGCT
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