DN620394

Overview
NameDN620394
Unique NameDN620394
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length572
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN620394 vs. ExPASy Swiss-Prot
Match: PROF_PRUPE (Profilin OS=Prunus persica PE=1 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 1.689e-63
Identity = 111/124 (89.52%), Postives = 121/124 (97.58%), Query Frame = -1
Query:  201 DDHLLCEIEGNHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 572
            DDHL+CEIEGNHLSAAAIIGHDGSVWAQS  FPQLKPEE+TGI+NDFNEPG+LAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVT+KK++ AL+IGIYDEPMTPGQCNMIVERLGDYL++QGL
Sbjct:    8 DDHLMCEIEGNHLSAAAIIGHDGSVWAQSATFPQLKPEEVTGILNDFNEPGSLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKSTLALLIGIYDEPMTPGQCNMIVERLGDYLVEQGL 131          
BLAST of DN620394 vs. ExPASy Swiss-Prot
Match: PROF2_MALDO (Profilin-2 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 8.383e-63
Identity = 110/124 (88.71%), Postives = 120/124 (96.77%), Query Frame = -1
Query:  201 DDHLLCEIEGNHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 572
            DDHL+CEIEGNHLSAAAIIGH+GSVWAQS  FPQLKPEE+TGIMNDFNEPG+LAPTGLYLGGTKYMVIQGEPG VIRGKKGPGGVT+KK++ AL+IGIYDEPMTPGQCNM+VERLGDYLI+QGL
Sbjct:    8 DDHLMCEIEGNHLSAAAIIGHNGSVWAQSATFPQLKPEEVTGIMNDFNEPGSLAPTGLYLGGTKYMVIQGEPGVVIRGKKGPGGVTVKKSTMALLIGIYDEPMTPGQCNMVVERLGDYLIEQGL 131          
BLAST of DN620394 vs. ExPASy Swiss-Prot
Match: PROF2_AMBAR (Profilin-2 OS=Ambrosia artemisiifolia GN=A0418 PE=1 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 1.430e-62
Identity = 112/123 (91.06%), Postives = 118/123 (95.93%), Query Frame = -1
Query:  204 DDHLLCEIEGNHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQG 572
            DDHL+CEIEGNHLSAAAIIGHDG VWAQS  FPQ+KPEEITGIMNDFNEPG+LAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKT+ ALIIGIYDEPM PGQCNMIVERLGDYL++QG
Sbjct:    8 DDHLMCEIEGNHLSAAAIIGHDGVVWAQSATFPQVKPEEITGIMNDFNEPGSLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTTMALIIGIYDEPMAPGQCNMIVERLGDYLLEQG 130          
BLAST of DN620394 vs. ExPASy Swiss-Prot
Match: PROF2_HEVBR (Profilin-2 OS=Hevea brasiliensis GN=PRO2 PE=1 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 3.185e-62
Identity = 112/123 (91.06%), Postives = 118/123 (95.93%), Query Frame = -1
Query:  204 DDHLLCEIEGNHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQG 572
            DDHL+CEIEGNHLSAAAIIG DGSVWAQS NFPQ K EEITGIM+DF+EPGTLAPTGLY+GGTKYMVIQGEPGAVIRGKKGPGGVT+KKT+ ALIIGIYDEPMTPGQCNMIVERLGDYLIDQG
Sbjct:    8 DDHLMCEIEGNHLSAAAIIGQDGSVWAQSANFPQFKSEEITGIMSDFHEPGTLAPTGLYIGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNQALIIGIYDEPMTPGQCNMIVERLGDYLIDQG 130          
BLAST of DN620394 vs. ExPASy Swiss-Prot
Match: PROF_FRAAN (Profilin OS=Fragaria ananassa PE=1 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 4.160e-62
Identity = 110/124 (88.71%), Postives = 119/124 (95.97%), Query Frame = -1
Query:  201 DDHLLCEIEGNHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 572
            DDHL+CEIEGNHLSAAAIIG DGSVWAQS  FPQLKPEE+TGI+ DF+EPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVT+KKT+ AL+IGIYDEPMTPGQCNMIVERLGDYL++QGL
Sbjct:    8 DDHLMCEIEGNHLSAAAIIGQDGSVWAQSATFPQLKPEEVTGIVRDFDEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTTLALLIGIYDEPMTPGQCNMIVERLGDYLVEQGL 131          
BLAST of DN620394 vs. ExPASy Swiss-Prot
Match: PROF1_RICCO (Profilin-1 OS=Ricinus communis GN=PRO1 PE=2 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 7.096e-62
Identity = 111/124 (89.52%), Postives = 117/124 (94.35%), Query Frame = -1
Query:  201 DDHLLCEIEGNHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 572
            DDHL+CEIEGNHL++AAIIG DGSVWAQS  FPQ KPEEIT IMNDFNEPG+LAPTGLYL GTKYMVIQGEPGAVIRGKKGPGGVT+KKT+ ALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL
Sbjct:    8 DDHLMCEIEGNHLTSAAIIGQDGSVWAQSSTFPQFKPEEITAIMNDFNEPGSLAPTGLYLSGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNQALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 131          
BLAST of DN620394 vs. ExPASy Swiss-Prot
Match: PROF1_PHAVU (Profilin-1 OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 9.268e-62
Identity = 109/124 (87.90%), Postives = 119/124 (95.97%), Query Frame = -1
Query:  201 DDHLLCEIEGNHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 572
            DDHLLCEIEGNHL+ AAI+G DGSVWA+S +FPQ KPEEITGIMNDFNEPGTLAPTGLY+GGTKYMVIQGEPG+VIRGKKGPGGVT+KKT+ AL+IGIYDEPMTPGQCNMIVERLGDYLI+QGL
Sbjct:    8 DDHLLCEIEGNHLTHAAILGQDGSVWAKSASFPQFKPEEITGIMNDFNEPGTLAPTGLYIGGTKYMVIQGEPGSVIRGKKGPGGVTVKKTNLALVIGIYDEPMTPGQCNMIVERLGDYLIEQGL 131          
BLAST of DN620394 vs. ExPASy Swiss-Prot
Match: PROF1_AMBAR (Profilin-1 OS=Ambrosia artemisiifolia GN=D106 PE=1 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 9.268e-62
Identity = 110/123 (89.43%), Postives = 118/123 (95.93%), Query Frame = -1
Query:  204 DDHLLCEIEGNHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQG 572
            DDHL+CEIEGNHLSAAAIIGHDG VWAQS  FPQ+KPEEITGIMNDFNEPG+LAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKT+ +LIIGIYDEPMTPGQCNM+VER GDYL++QG
Sbjct:    8 DDHLMCEIEGNHLSAAAIIGHDGVVWAQSATFPQVKPEEITGIMNDFNEPGSLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTTMSLIIGIYDEPMTPGQCNMLVERPGDYLLEQG 130          
BLAST of DN620394 vs. ExPASy Swiss-Prot
Match: PROF1_SOYBN (Profilin-1 OS=Glycine max GN=PRO1 PE=1 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 3.522e-61
Identity = 110/123 (89.43%), Postives = 116/123 (94.31%), Query Frame = -1
Query:  204 DDHLLCEIEGNHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQG 572
            DDHLLC+IEGNHL+ AAIIG DGSVWAQS +FPQ KPEEIT IMNDFNEPG+LAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVT+KKT AALIIGIYDEPMTPGQCNM+VER GDYLIDQG
Sbjct:    8 DDHLLCDIEGNHLTHAAIIGQDGSVWAQSTDFPQFKPEEITAIMNDFNEPGSLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTGAALIIGIYDEPMTPGQCNMVVERPGDYLIDQG 130          
BLAST of DN620394 vs. ExPASy Swiss-Prot
Match: PROF2_SOYBN (Profilin-2 OS=Glycine max GN=PRO2 PE=1 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 6.007e-61
Identity = 110/123 (89.43%), Postives = 115/123 (93.50%), Query Frame = -1
Query:  204 DDHLLCEIEGNHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQG 572
            DDHLLC IEGNHL+ AAIIG DGSVW QS +FPQ KPEEIT IMNDFNEPG+LAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVT+KKT AALIIGIYDEPMTPGQCNM+VERLGDYLIDQG
Sbjct:    8 DDHLLCGIEGNHLTHAAIIGQDGSVWLQSTDFPQFKPEEITAIMNDFNEPGSLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTGAALIIGIYDEPMTPGQCNMVVERLGDYLIDQG 130          
The following BLAST results are available for this feature:
BLAST of DN620394 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
PROF_PRUPE1.689e-6389.52Profilin OS=Prunus persica PE=1 SV=1[more]
PROF2_MALDO8.383e-6388.71Profilin-2 OS=Malus domestica PE=1 SV=1[more]
PROF2_AMBAR1.430e-6291.06Profilin-2 OS=Ambrosia artemisiifolia GN=A0418 PE=... [more]
PROF2_HEVBR3.185e-6291.06Profilin-2 OS=Hevea brasiliensis GN=PRO2 PE=1 SV=1[more]
PROF_FRAAN4.160e-6288.71Profilin OS=Fragaria ananassa PE=1 SV=1[more]
PROF1_RICCO7.096e-6289.52Profilin-1 OS=Ricinus communis GN=PRO1 PE=2 SV=1[more]
PROF1_PHAVU9.268e-6287.90Profilin-1 OS=Phaseolus vulgaris PE=1 SV=1[more]
PROF1_AMBAR9.268e-6289.43Profilin-1 OS=Ambrosia artemisiifolia GN=D106 PE=1... [more]
PROF1_SOYBN3.522e-6189.43Profilin-1 OS=Glycine max GN=PRO1 PE=1 SV=1[more]
PROF2_SOYBN6.007e-6189.43Profilin-2 OS=Glycine max GN=PRO2 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_05E05_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0005E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN620394 ID=DN620394; Name=DN620394; organism=Citrus sinensis; type=EST; length=572bp
TTTTTTTTTTTTTTTTTGACAACCATAACAATACTACAAATAGATGATAT
CAAGAACTTCCACATGCACCAAACCTTTCCTTTCCACACACAGTTCCCAT
AACTTTGAATACTGTAATATTATTACACCGAAGTTCAACAGTGCGAGCTT
TTTAGGGAAGCCAAGAAATGAAACAAATTAGCGGACATGCAAACCACCTA
AAGACCCTGATCAATGAGATAATCACCAAGCCTTTCAACAATCATGTTGC
ACTGCCCAGGGGTCATCGGCTCATCATAGATTCCAATGATTAAGGCCGCA
CTGGTCTTCTTGATGGTAACACCACCAGGGCCCTTCTTCCCTCGGATGAC
AGCACCTGGCTCACCCTGGATCACCATATATTTTGTGCCACCAAGATACA
GTCCAGTTGGTGCTAGTGTTCCAGGTTCATTAAAGTCATTCATGATACCA
GTTATTTCCTCAGGTTTTAACTGAGGGAAGTTTTCACTCTGGGCCCAAAC
GCTGCCGTCGTGGCCGATGATAGCGGCAGCTGAGAGATGGTTACCCTCAA
TTTCACACAACAGATGATCATC
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