DN620392

Overview
NameDN620392
Unique NameDN620392
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length613
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DN620392 vs. ExPASy Swiss-Prot
Match: NO93_SOYBN (Early nodulin-93 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.888e-18
Identity = 49/92 (53.26%), Postives = 60/92 (65.22%), Query Frame = 2 
Query:  191 NSPLIASPAEDLKAKAA--NDCVQEGVRAGLKAAAVMCVVTAVPTLVAVRKIPWAKANLNYTGQALIISAVSIASYFITVDKTILECARRNA 460
            NSPL       L  K A    C  EGV AG KAA V  V +A+PTL +VR +PWA+ANLN+T QALIIS  + A+YFI  DKT+L  AR+N+
Sbjct:    5 NSPLERPSLASLDQKLAFAKRCSHEGVLAGAKAAVVASVASAIPTLASVRMLPWARANLNHTAQALIISTATAAAYFIVADKTVLATARKNS 96
The following BLAST results are available for this feature:
BLAST of DN620392 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
NO93_SOYBN1.888e-1853.26Early nodulin-93 OS=Glycine max PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_05E04_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0005E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN620392 ID=DN620392; Name=DN620392; organism=Citrus sinensis; type=EST; length=613bp
TTCAAAAGCACATAAAAAGAGATCAAAATCGAAACGAACACTGCAATGCA
GTGTCCTCCTCAAATCTTAATCCGCCATCCATTTTTGAGTTTCTTATTCT
AATTAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGAATGGGATTTCC
GTCGGAAGTTAGAGATATTTTTGCATCCAGAAGGTCAAATAACTCGCCAC
TGATTGCCTCTCCTGCTGAAGATCTAAAGGCTAAGGCCGCCAACGACTGC
GTTCAAGAAGGCGTTCGAGCTGGATTAAAGGCCGCTGCCGTAATGTGTGT
TGTCACCGCTGTGCCTACGTTGGTTGCAGTTCGAAAAATTCCTTGGGCAA
AGGCAAACCTGAATTATACTGGTCAGGCACTCATCATATCCGCAGTGTCA
ATTGCTTCTTACTTCATCACTGTTGACAAGACTATTTTGGAGTGTGCAAG
GAGGAATGCCCAGTATGGCAAACCAACTTGAGATTCTGTACCTGAAGCAA
TTCACCATGAAGATGCCATGATATGCGTAGTGAGCATAGCACGCAGGTTC
ATATGAGAATATTTAAATGTATTTGAGACAATTTTTTTCCCCACTTGAGC
AACCGATGGAATT
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