EY680369

Overview
NameEY680369
Unique NameEY680369
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length861
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680369 vs. ExPASy Swiss-Prot
Match: HDG5_ARATH (Homeobox-leucine zipper protein HDG5 OS=Arabidopsis thaliana GN=HDG5 PE=2 SV=2)

HSP 1 Score: 231.491 bits (589), Expect = 6.344e-62
Identity = 126/198 (63.64%), Postives = 146/198 (73.74%), Query Frame = 2
Query:   17 TTRKITEPGQPNGPILCAVSTTWLPYPHYQVFDLLRDERRRSQQLDVLSNGNALHEVAHIANGSHPGNCISLLRINVASNSSQHVELMLQESCTDQSGSLVVYTTVDVDSIQLAMSGEDPSCIPLLPLGFVIVPVEPIKEXXXXXXXXXXXXXXMALSPEEANNIGVQNNS-AGCLLTVGLQVLGSTIPSAKLNLSSV 607
            TTRK+ EPGQP G +LCAVSTTWLP+ H+QVFDL+RD+  +S  L+VL NGN+ HEVAHIANGSHPGNCISLLRINVASNS  +VELMLQESC D SGSL+VY+TVDVDSIQ AM+GED S IP+LPLGF IVPV P                     PE    I V ++S   CLLTVG+QVL S +P+AK NLS+V
Sbjct:  610 TTRKMCEPGQPTGVVLCAVSTTWLPFSHHQVFDLIRDQHHQSL-LEVLFNGNSPHEVAHIANGSHPGNCISLLRINVASNSWHNVELMLQESCIDNSGSLIVYSTVDVDSIQQAMNGEDSSNIPILPLGFSIVPVNP---------------------PE---GISVNSHSPPSCLLTVGIQVLASNVPTAKPNLSTV 782          

HSP 2 Score: 28.1054 bits (61), Expect = 6.344e-62
Identity = 11/16 (68.75%), Postives = 14/16 (87.50%), Query Frame = 3
Query:  606 LTPINSHLCSTVQQIT 653
            +T IN+HLC+TV QIT
Sbjct:  782 VTTINNHLCATVNQIT 797          
BLAST of EY680369 vs. ExPASy Swiss-Prot
Match: ROC3_ORYSJ (Homeobox-leucine zipper protein ROC3 OS=Oryza sativa subsp. japonica GN=ROC3 PE=2 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.067e-58
Identity = 127/214 (59.35%), Postives = 148/214 (69.16%), Query Frame = 2
Query:   17 TTRKITEPGQPNGPILCAVSTTWLPYPHYQVFDLLRDERRRSQQLDVLSNGNALHEVAHIANGSHPGNCISLLRINVASNSSQHVELMLQESCT-DQSGSLVVYTTVDVDSIQLAMSGEDPSCIPLLPLGFVIVP-------VEPIKEXXXXXXXXXXXXXXMALSPEEANNIGVQNNSA-------GCLLTVGLQVLGSTIPSAKLNLSSVNA 613
            TTRK TEPGQP+G IL AVST+WLP+ H QVF+LL DE++R Q L++LSNG +LHEVAHIANGSHP NCISLLRIN ASNSSQ+VEL+LQES T    GSLVV+ TVDVD+IQ+ MSGEDPS IPLLPLGF I P         P                  +  P  +++    NN+A       GCLLTVG+QVL S +PSAKLNLSSV A
Sbjct:  642 TTRKNTEPGQPSGVILTAVSTSWLPFTHQQVFELLADEQQRCQ-LEILSNGGSLHEVAHIANGSHPRNCISLLRINAASNSSQNVELLLQESSTHPDGGSLVVFATVDVDAIQVTMSGEDPSYIPLLPLGFAIFPATSPSPAAAPTISSSTTTTTGNGNGETSSTPPRNSSS---NNNNADELLPPNGCLLTVGMQVLASAVPSAKLNLSSVTA 851          

HSP 2 Score: 26.1794 bits (56), Expect = 1.067e-58
Identity = 9/17 (52.94%), Postives = 14/17 (82.35%), Query Frame = 3
Query:  603 ALTPINSHLCSTVQQIT 653
            ++T INSH+C+ + QIT
Sbjct:  848 SVTAINSHVCNAIHQIT 864          
BLAST of EY680369 vs. ExPASy Swiss-Prot
Match: ROC3_ORYSI (Homeobox-leucine zipper protein ROC3 OS=Oryza sativa subsp. indica GN=ROC3 PE=3 SV=2)

HSP 1 Score: 222.631 bits (566), Expect = 1.067e-58
Identity = 127/214 (59.35%), Postives = 148/214 (69.16%), Query Frame = 2
Query:   17 TTRKITEPGQPNGPILCAVSTTWLPYPHYQVFDLLRDERRRSQQLDVLSNGNALHEVAHIANGSHPGNCISLLRINVASNSSQHVELMLQESCT-DQSGSLVVYTTVDVDSIQLAMSGEDPSCIPLLPLGFVIVP-------VEPIKEXXXXXXXXXXXXXXMALSPEEANNIGVQNNSA-------GCLLTVGLQVLGSTIPSAKLNLSSVNA 613
            TTRK TEPGQP+G IL AVST+WLP+ H QVF+LL DE++R Q L++LSNG +LHEVAHIANGSHP NCISLLRIN ASNSSQ+VEL+LQES T    GSLVV+ TVDVD+IQ+ MSGEDPS IPLLPLGF I P         P                  +  P  +++    NN+A       GCLLTVG+QVL S +PSAKLNLSSV A
Sbjct:  642 TTRKNTEPGQPSGVILTAVSTSWLPFTHQQVFELLADEQQRCQ-LEILSNGGSLHEVAHIANGSHPRNCISLLRINAASNSSQNVELLLQESSTHPDGGSLVVFATVDVDAIQVTMSGEDPSYIPLLPLGFAIFPATSPSPAAAPTISSSTTTTTGNGNGETSSTPPRNSSS---NNNNADELLPPNGCLLTVGMQVLASAVPSAKLNLSSVTA 851          

HSP 2 Score: 26.1794 bits (56), Expect = 1.067e-58
Identity = 9/17 (52.94%), Postives = 14/17 (82.35%), Query Frame = 3
Query:  603 ALTPINSHLCSTVQQIT 653
            ++T INSH+C+ + QIT
Sbjct:  848 SVTAINSHVCNAIHQIT 864          
BLAST of EY680369 vs. ExPASy Swiss-Prot
Match: HDG4_ARATH (Homeobox-leucine zipper protein HDG4 OS=Arabidopsis thaliana GN=HDG4 PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.977e-46
Identity = 110/213 (51.64%), Postives = 136/213 (63.85%), Query Frame = 2
Query:   20 TRKITEPGQPNGPILCAVSTTWLPYPHYQVFDLLRDERRRSQQLDVLSNGNALHEVAHIANGSHPGNCISLLRINVASNSSQHVELMLQESCTDQSGSLVVYTTVDVDSIQLAMSGEDPSCIPLLPLGFVIVPVEPIKEXXXXXXXXXXXXXXMALSPEEANNIGVQNNSAGCLLTVGLQVLGSTIPSAKLNLSSVNANQQPSLQHCATNHRL 658
            T KI       G + CAVS T LPY H QVFDLLRD +R SQ L++L  G++  EVAHIANGSH GN ISLLRINV SNSS +VELMLQE+CTD SGSL+VY+TVD  ++QLAM+GEDPS IPLLP+GF +VPV P                            G   +S  CLLTV +QVLGS + + +L+LS+V+       + CAT +R+
Sbjct:  514 TVKIVSRKVCGGLVPCAVSVTLLPYSHQQVFDLLRDNQRLSQ-LEILFMGSSFQEVAHIANGSHLGNSISLLRINVESNSSHNVELMLQETCTDNSGSLLVYSTVDPVAVQLAMNGEDPSEIPLLPVGFSVVPVNPSDGVE-----------------------GSSVSSPSCLLTVAIQVLGSNVTTERLDLSTVSVINH---RICATVNRI 699          
BLAST of EY680369 vs. ExPASy Swiss-Prot
Match: ROC8_ORYSJ (Homeobox-leucine zipper protein ROC8 OS=Oryza sativa subsp. japonica GN=ROC8 PE=2 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 4.603e-39
Identity = 94/197 (47.72%), Postives = 119/197 (60.41%), Query Frame = 2
Query:   17 TTRKITEPGQPNGPILCAVSTTWLPYPHYQVFDLLRDERRRSQQLDVLSNGNALHEVAHIANGSHPGNCISLLRINVASNSSQHVELMLQESCTDQSGSLVVYTTVDVDSIQLAMSGEDPSCIPLLPLGFVIVPVEPIKEXXXXXXXXXXXXXXMALSPEEANNIGVQNNSAGCLLTVGLQVLGSTIPSAKLNLSSV 607
            T  + T+PGQPNG +L A ++ WLP P   VF  +RDE  RSQ  DVLS+GN + EV+ I NGS+PGNCISLLR     N+SQ+  L+LQESCTD SGSLVVY+ +D+ +  + MSGEDPS IPLLP GF I+P                     A     A   G      G ++TV  Q+L S++PS+KLN  SV
Sbjct:  498 TMHRSTDPGQPNGVVLSAATSIWLPVPCDHVFAFVRDENTRSQW-DVLSHGNQVQEVSRIPNGSNPGNCISLLR---GLNASQNSMLILQESCTDASGSLVVYSPIDIPAANVVMSGEDPSSIPLLPSGFTILP-------DGRPGSAAGASTSSAGPLAAARGGGGGGAGGGSVVTVAFQILVSSLPSSKLNAESV 683          
BLAST of EY680369 vs. ExPASy Swiss-Prot
Match: HDG11_ARATH (Homeobox-leucine zipper protein HDG11 OS=Arabidopsis thaliana GN=HDG11 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.897e-38
Identity = 90/188 (47.87%), Postives = 120/188 (63.83%), Query Frame = 2
Query:   44 QPNGPILCAVSTTWLPYPHYQVFDLLRDERRRSQQLDVLSNGNALHEVAHIANGSHPGNCISLLRINVASNSSQHVELMLQESCTDQSGSLVVYTTVDVDSIQLAMSGEDPSCIPLLPLGFVIVPVEPIKEXXXXXXXXXXXXXXMALSPEEANNIGVQNNSAGCLLTVGLQVLGSTIPSAKLNLSSV 607
            +PNG +LCA +T WLP     VF+ L+DER R Q  DVLSNGNA+ EVAHI+NGSHPGNCIS+LR + A++S+    L+LQES TD SG+ VVY+ VD+ ++ +AMSGEDPS IPLL  GF I P                           A+    + +++G L+TVG Q++ S +P+AKLN+ SV
Sbjct:  527 EPNGTVLCAATTFWLPNSPQNVFNFLKDERTRPQW-DVLSNGNAVQEVAHISNGSHPGNCISVLRGSNATHSNN--MLILQESSTDSSGAFVVYSPVDLAALNIAMSGEDPSYIPLLSSGFTISP----------------DGNGSNSEQGGASTSSGRASASGSLITVGFQIMVSNLPTAKLNMESV 695          
BLAST of EY680369 vs. ExPASy Swiss-Prot
Match: ROC2_ORYSJ (Homeobox-leucine zipper protein ROC2 OS=Oryza sativa subsp. japonica GN=ROC2 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.134e-37
Identity = 88/197 (44.67%), Postives = 120/197 (60.91%), Query Frame = 2
Query:   17 TTRKITEPGQPNGPILCAVSTTWLPYPHYQVFDLLRDERRRSQQLDVLSNGNALHEVAHIANGSHPGNCISLLRINVASNSSQHVELMLQESCTDQSGSLVVYTTVDVDSIQLAMSGEDPSCIPLLPLGFVIVPVEPIKEXXXXXXXXXXXXXXMALSPEEANNIGVQNNSAGCLLTVGLQVLGSTIPSAKLNLSSV 607
            T + + +PG+P G +L A ++ WLP P  +VFD LRDE  RS+  D+LSNG  + E+AHIANG   GNC+SLLR+N +SNS+Q   L+LQESCTD SGS V+Y  VDV ++ + ++G DP  + LLP GF I+P  P  +                       + GV   S G LLTV  Q+L  ++P+AKL+L SV
Sbjct:  584 TRKSVDDPGRPPGIVLNAATSFWLPVPPKRVFDFLRDESSRSEW-DILSNGGIVQEMAHIANGRDQGNCVSLLRVN-SSNSNQSNMLILQESCTDASGSYVIYAPVDVVAMNVVLNGGDPDYVALLPSGFAILPDGPAHDGGD-------------------GDGGVGVGSGGSLLTVAFQILVDSVPTAKLSLGSV 759          
BLAST of EY680369 vs. ExPASy Swiss-Prot
Match: PDF2_ARATH (Homeobox-leucine zipper protein PROTODERMAL FACTOR 2 OS=Arabidopsis thaliana GN=PDF2 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 6.222e-36
Identity = 83/197 (42.13%), Postives = 118/197 (59.90%), Query Frame = 2
Query:   17 TTRKITEPGQPNGPILCAVSTTWLPYPHYQVFDLLRDERRRSQQLDVLSNGNALHEVAHIANGSHPGNCISLLRINVASNSSQHVELMLQESCTDQSGSLVVYTTVDVDSIQLAMSGEDPSCIPLLPLGFVIVPVEPIKEXXXXXXXXXXXXXXMALSPEEANNIGVQNNSAGCLLTVGLQVLGSTIPSAKLNLSSV 607
            T + + +PG+P G +L A ++ W+P    +VFD LRDE  R ++ D+LSNG  + E+AHIANG  PGNC+SLLR+N + NSSQ   L+LQESCTD SGS V+Y  VD+ ++ + +SG DP  + LLP GF I+P   +                     +E  +     +  G LLTV  Q+L  ++P+AKL+L SV
Sbjct:  536 TRKSMDDPGRPPGIVLSAATSFWIPVAPKRVFDFLRDENSR-KEWDILSNGGMVQEMAHIANGHEPGNCVSLLRVN-SGNSSQSNMLILQESCTDASGSYVIYAPVDIVAMNVVLSGGDPDYVALLPSGFAILPDGSVGGGDGN-------------QHQEMVSTTSSGSCGGSLLTVAFQILVDSVPTAKLSLGSV 717          
BLAST of EY680369 vs. ExPASy Swiss-Prot
Match: HDG2_ARATH (Homeobox-leucine zipper protein HDG2 OS=Arabidopsis thaliana GN=HDG2 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 6.222e-36
Identity = 82/197 (41.62%), Postives = 115/197 (58.38%), Query Frame = 2
Query:   17 TTRKITEPGQPNGPILCAVSTTWLPYPHYQVFDLLRDERRRSQQLDVLSNGNALHEVAHIANGSHPGNCISLLRINVASNSSQHVELMLQESCTDQSGSLVVYTTVDVDSIQLAMSGEDPSCIPLLPLGFVIVPVEPIKEXXXXXXXXXXXXXXMALSPEEANNIGVQNNSAGCLLTVGLQVLGSTIPSAKLNLSSV 607
            T + + +PG+P G +L A ++ W+P P  +VFD LRDE  R++  D+LSNG  + E+AHIANG   GNC+SLLR+N A NSSQ   L+LQESCTD + S V+Y  VD+ ++ + ++G DP  + LLP GF I+P                         +   N G      G LLTV  Q+L  ++P+AKL+L SV
Sbjct:  529 TRKSVDDPGRPPGIVLSAATSFWIPVPPKRVFDFLRDENSRNEW-DILSNGGVVQEMAHIANGRDTGNCVSLLRVNSA-NSSQSNMLILQESCTDPTASFVIYAPVDIVAMNIVLNGGDPDYVALLPSGFAILP-------------------------DGNANSGAPGGDGGSLLTVAFQILVDSVPTAKLSLGSV 698          
BLAST of EY680369 vs. ExPASy Swiss-Prot
Match: ATML1_ARATH (Homeobox-leucine zipper protein MERISTEM L1 OS=Arabidopsis thaliana GN=ATML1 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.386e-35
Identity = 85/200 (42.50%), Postives = 118/200 (59.00%), Query Frame = 2
Query:   17 TTRKITEPGQPNGPILCAVSTTWLPYPHYQVFDLLRDERRRSQQLDVLSNGNALHEVAHIANGSHPGNCISLLRINVASNSSQHVELMLQESCTDQSGSLVVYTTVDVDSIQLAMSGEDPSCIPLLPLGFVIVPVEPIKEXXXXXXXXXXXXXXMALSPEEANNIGVQNNSAGC---LLTVGLQVLGSTIPSAKLNLSSV 607
            T + + +PG+P G +L A ++ W+P    +VFD LRDE  RS+  D+LSNG  + E+AHIANG  PGN +SLLR+N + NS Q   L+LQESCTD SGS V+Y  VD+ ++ + +SG DP  + LLP GF I+P    +                     E NN+ V   +  C   LLTV  Q+L  ++P+AKL+L SV
Sbjct:  545 TRKSMDDPGRPPGIVLSAATSFWIPVAPKRVFDFLRDENSRSEW-DILSNGGLVQEMAHIANGRDPGNSVSLLRVN-SGNSGQSNMLILQESCTDASGSYVIYAPVDIIAMNVVLSGGDPDYVALLPSGFAILPDGSARGGGGSANASAGAGVE---GGGEGNNLEVVTTTGSCGGSLLTVAFQILVDSVPTAKLSLGSV 739          
The following BLAST results are available for this feature:
BLAST of EY680369 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
HDG5_ARATH6.344e-6263.64Homeobox-leucine zipper protein HDG5 OS=Arabidopsi... [more]
ROC3_ORYSJ1.067e-5859.35Homeobox-leucine zipper protein ROC3 OS=Oryza sati... [more]
ROC3_ORYSI1.067e-5859.35Homeobox-leucine zipper protein ROC3 OS=Oryza sati... [more]
HDG4_ARATH2.977e-4651.64Homeobox-leucine zipper protein HDG4 OS=Arabidopsi... [more]
ROC8_ORYSJ4.603e-3947.72Homeobox-leucine zipper protein ROC8 OS=Oryza sati... [more]
HDG11_ARATH3.897e-3847.87Homeobox-leucine zipper protein HDG11 OS=Arabidops... [more]
ROC2_ORYSJ1.134e-3744.67Homeobox-leucine zipper protein ROC2 OS=Oryza sati... [more]
PDF2_ARATH6.222e-3642.13Homeobox-leucine zipper protein PROTODERMAL FACTOR... [more]
HDG2_ARATH6.222e-3641.62Homeobox-leucine zipper protein HDG2 OS=Arabidopsi... [more]
ATML1_ARATH1.386e-3542.50Homeobox-leucine zipper protein MERISTEM L1 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-010-D01-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680369 ID=EY680369; Name=EY680369; organism=Citrus sinensis; type=EST; length=861bp
CTGACACTGTGAGACCACAACAAGGAAAATCACAGAGCCCGGTCAGCCTA
ATGGTCCCATTCTCTGTGCTGTATCTACTACTTGGCTCCCATATCCTCAT
TACCAAGTCTTCGATCTCTTGCGTGATGAACGTCGCAGATCTCAGCAGCT
AGATGTTCTTTCTAATGGCAATGCCCTGCATGAGGTGGCTCACATTGCCA
ATGGCTCTCATCCAGGAAACTGCATCTCTCTTCTCCGAATCAACGTTGCT
AGCAATTCATCCCAGCACGTGGAGCTGATGCTGCAAGAGAGTTGCACAGA
CCAATCTGGCAGCCTTGTTGTTTACACAACCGTTGATGTTGATTCAATTC
AGCTAGCAATGAGCGGCGAGGATCCATCTTGCATCCCTCTCCTCCCATTA
GGGTTTGTAATAGTCCCAGTTGAACCAATCAAAGAGAGTAACACTACTAG
CGGCGACGGCAACGGCAATGGCAACTCTATGGCTTTGTCACCTGAAGAAG
CAAACAACATTGGAGTACAAAATAACTCAGCAGGTTGTTTACTCACTGTT
GGCCTTCAGGTTCTTGGCAGCACAATCCCATCTGCCAAGCTCAATCTCTC
TAGCGTTAACGCCAATCAACAGCCATCTTTGCAGCACTGTGCAACAAATC
ACCGGCTGCTCTTAACCAAGGGCACCGGGCCCGGGGACTGGGCGGCCCTG
AAAAAAAACAACAAACGGGCCCGGTTTTAGGGGTCTTGGGCAAAAGCCCG
GAGGGTGGGGGGGGGCCACCAAACCAAAAGGGGGGGAATTCATATTTCCT
CCGTTTTCAAAAATAACCCAAAAACCCCCCCCCTTTGGGAAAAATTTTCC
CTTTCCCCTTA
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