FC922032
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC922032 vs. ExPASy Swiss-Prot
Match: CTNS_ARATH (Cystinosin homolog OS=Arabidopsis thaliana GN=At5g40670 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 7.518e-35 Identity = 68/98 (69.39%), Postives = 83/98 (84.69%), Query Frame = 2 Query: 2 GRDQMIPVAANDVAFSMHAVLLTIITLFQIAIYERGVQEVSKISMAIVSVVWLAAAVCFFVALPNHSWLWLINFFNAIQVIMTLIKYIPQAIMNFRRK 295 G +MIPVAANDVAFS+HAV++T +TLFQI IYERG Q+VS++++ IV VVW AA+CFF+ALP HSWLWLI+ FN+IQV MT +KYIPQA MNF RK Sbjct: 81 GDKEMIPVAANDVAFSIHAVVMTAVTLFQIFIYERGPQKVSRLAIGIVVVVWGFAAICFFIALPTHSWLWLISIFNSIQVFMTCVKYIPQAKMNFTRK 178
BLAST of FC922032 vs. ExPASy Swiss-Prot
Match: CTNS_DICDI (Cystinosin homolog OS=Dictyostelium discoideum GN=ctns PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.198e-18 Identity = 39/94 (41.49%), Postives = 66/94 (70.21%), Query Frame = 2 Query: 17 IPVAANDVAFSMHAVLLTIITLFQIAIYERGVQEVSKISMAIVSVVWLAAAVCFFVALPN-HSWLWLINFFNAIQVIMTLIKYIPQAIMNFRRK 295 IPV +D+AF++H +LT IT+ Q IY+RG Q+ SK+ + I +++W++ V + N +WLW+IN+++ +++ +T IKYIPQA +NF+ K Sbjct: 79 IPVQQSDIAFAIHGFVLTAITIIQCFIYDRGNQKNSKLGIGIATLIWVSLIVMTILGFSNVFTWLWVINYYSYVKLFITFIKYIPQAYLNFKNK 172
BLAST of FC922032 vs. ExPASy Swiss-Prot
Match: CTNS_MOUSE (Cystinosin OS=Mus musculus GN=Ctns PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.642e-15 Identity = 43/93 (46.24%), Postives = 57/93 (61.29%), Query Frame = 2 Query: 20 PVAANDVAFSMHAVLLTIITLFQIAIYERGVQEVSKISMAIVSVVWLAAAVCFFVALPN-HSWLWLINFFNAIQVIMTLIKYIPQAIMNFRRK 295 PV +ND FS+HAV LT+I + Q +YERG Q VS S+ + + WL V VA +WL + F+ I++I+TLIKY PQA MNF K Sbjct: 200 PVDSNDAFFSLHAVALTLIVILQCCLYERGNQRVSWPSIGFLVLAWLFVLVTMIVAAVGITTWLQFLFCFSYIKLIITLIKYFPQAYMNFYYK 292
BLAST of FC922032 vs. ExPASy Swiss-Prot
Match: CTNS_HUMAN (Cystinosin OS=Homo sapiens GN=CTNS PE=1 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 1.474e-14 Identity = 42/93 (45.16%), Postives = 59/93 (63.44%), Query Frame = 2 Query: 20 PVAANDVAFSMHAVLLTIITLFQIAIYERGVQEVSKISMAIVSVVWLAAAVCFFVALPN-HSWLWLINFFNAIQVIMTLIKYIPQAIMNFRRK 295 PV +NDV FS+HAV+LT+I + Q +YERG Q VS ++ + + WL A V VA +WL + F+ I++ +TL+KY PQA MNF K Sbjct: 200 PVNSNDVFFSLHAVVLTLIIIVQCCLYERGGQRVSWPAIGFLVLAWLFAFVTMIVAAVGVTTWLQFLFCFSYIKLAVTLVKYFPQAYMNFYYK 292
BLAST of FC922032 vs. ExPASy Swiss-Prot
Match: CTNS_BOVIN (Cystinosin OS=Bos taurus GN=CTNS PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.514e-14 Identity = 38/93 (40.86%), Postives = 60/93 (64.52%), Query Frame = 2 Query: 20 PVAANDVAFSMHAVLLTIITLFQIAIYERGVQEVSKISMAIVSVVWLAAAVCFFV-ALPNHSWLWLINFFNAIQVIMTLIKYIPQAIMNFRRK 295 PV +NDV FS+HAV LT++ + Q +YERG Q VS ++++ + + WL + + A+ +WL + F+ I++ +TL+KY PQA MNF K Sbjct: 200 PVDSNDVFFSLHAVALTLVVIVQCLLYERGSQRVSWLAISFLVLSWLFTLIALIMAAVGATTWLQFLFCFSYIKLAVTLVKYFPQAYMNFHYK 292
BLAST of FC922032 vs. ExPASy Swiss-Prot
Match: CTNS_DROME (Cystinosin homolog OS=Drosophila melanogaster GN=CG17119 PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 2.353e-12 Identity = 38/95 (40.00%), Postives = 57/95 (60.00%), Query Frame = 2 Query: 20 PVAANDVAFSMHAVLLTIITLFQIAIYERGVQEVSKISMAIVSVVWLAAAVCFFVALPNHS---WLWLINFFNAIQVIMTLIKYIPQAIMNFRRK 295 PV NDV FS+HA+ T IT+ Q Y+R Q VS I+ I+++ A V L S WL + + + +++ +T+IKY+PQA+MN+RRK Sbjct: 205 PVMLNDVVFSLHAMFATCITILQCFFYQRAQQRVSFIAYGILAI--FAVVVVVSAGLAGGSVIHWLDFLYYCSYVKLTITIIKYVPQALMNYRRK 297 The following BLAST results are available for this feature:
BLAST of FC922032 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC922032 ID=FC922032; Name=FC922032; organism=Citrus sinensis; type=EST; length=296bpback to top |