DN620340

Overview
NameDN620340
Unique NameDN620340
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length810
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN620340 vs. ExPASy Swiss-Prot
Match: OSBL1_RAT (Oxysterol-binding protein-related protein 1 OS=Rattus norvegicus GN=Osbpl1a PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.840e-19
Identity = 62/205 (30.24%), Postives = 98/205 (47.80%), Query Frame = -1
Query:  274 KVVLYFQPCGWFGAGRYEVDGYVYDAAEQPKILMTGKWNESM-SYQPC--------------------------DSEGEPLPGTELKEV-------WRVADAPVD--DKYQYTYFTHKLNSFDTAPKKLLP-SDSRLRPDRYALEKGDLSKAGSEKSRLEERQRAEKRIREAKDDMFTPKWFDLSDEVTPTPWGDLEVYRYNGKY 777
            K VL F+PCG FG   ++V+GY+ D +++    + GKW E + S  P                           +S+  P+P +E   V       WR+A  P +    Y +T F   LN  D   + ++P +D RLRPD  A+E G++ +A  EK RLEE+QRA ++ R   ++ +  +WF       P P+   + + Y+G Y
Sbjct:  738 KCVLNFKPCGLFGKELHKVEGYIQDKSKKKLCALYGKWTECLYSVDPATFDAYKKNDKKNTEEKKTSKQASTSEESDEMPVPDSESVFVIPGSALLWRIAPRPPNSAQMYNFTSFAMVLNEVDKEMETVIPKTDCRLRPDIRAMENGEIDQASEEKKRLEEKQRAARKNRSKSEEDWKTRWFHQG----PNPYSGAQDWIYSGSY 938          
BLAST of DN620340 vs. ExPASy Swiss-Prot
Match: OSB8_DICDI (Oxysterol-binding protein 8 OS=Dictyostelium discoideum GN=osbH PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.845e-19
Identity = 66/177 (37.29%), Postives = 94/177 (53.11%), Query Frame = -1
Query:  262 KVVLYFQPCGWFGAGRYEVDGYVYDAAEQPKILMTGKWNESMS-YQPCDSEGEPLPGTELKEVWRVADAPVDDKYQYTYFTHK-LNSFDTAPKKLLP-SDSRLRPDRYALEKGDLSKAGSEKSRLEERQRAEKRIREAKDDMFTPKWFDLSDEVTPTPWGDLEVYRYN--GKYSELR 777
            K VL F   GW GAGRY V G + D     +  +TGKWNES+  +Q  D+       T L   W  +  P+++K+ +  +  + +   +   KK+LP +DSRLR DR ALE+G+L  A  EK  LEE+QR +KR R A++  +    F   D+     +G    YR+N  G Y E R
Sbjct:  226 KAVLKFAKSGWLGAGRYGVTGEIVDCEGDVRYRITGKWNESIQLFQVMDNGSSSTTSTCL---WEASKEPINNKFLFPRWVEENVIDLNDEYKKILPVTDSRLRADRIALEEGNLDVAAKEKHNLEEKQREDKRQRVAENKEWETAQFKKVDD---AKFG----YRWNYCGNYWEER 392          
BLAST of DN620340 vs. ExPASy Swiss-Prot
Match: OSBL1_MOUSE (Oxysterol-binding protein-related protein 1 OS=Mus musculus GN=Osbpl1a PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 6.328e-19
Identity = 61/205 (29.76%), Postives = 97/205 (47.32%), Query Frame = -1
Query:  274 KVVLYFQPCGWFGAGRYEVDGYVYDAAEQPKILMTGKWNESM-SYQPC--------------------------DSEGEPLPGTELKEV-------WRVADAPVD--DKYQYTYFTHKLNSFDTAPKKLLP-SDSRLRPDRYALEKGDLSKAGSEKSRLEERQRAEKRIREAKDDMFTPKWFDLSDEVTPTPWGDLEVYRYNGKY 777
            K VL F+PCG FG   ++V+GY+ D +++    + GKW E + S  P                           +S+  P+P +E   +       WR+A  P +    Y +T F   LN  D   + ++P +D RLRPD  A+E G++  A  EK RLEE+QRA ++ R   ++ +  +WF       P P+   + + Y+G Y
Sbjct:  738 KCVLNFKPCGLFGKELHKVEGYIQDKSKKKLCALYGKWTECLYSVDPATFDAYKKNDKKNTEEKKNSKQTSSSEESDEMPVPDSESVFIIPGSVLLWRIAPRPPNSAQMYNFTSFAMVLNEVDKEMESVIPKTDCRLRPDIRAMENGEIDLASEEKKRLEEKQRAARKNRSKSEEDWKTRWFHQG----PNPYSGAQDWIYSGSY 938          
BLAST of DN620340 vs. ExPASy Swiss-Prot
Match: OSBL1_HUMAN (Oxysterol-binding protein-related protein 1 OS=Homo sapiens GN=OSBPL1A PE=1 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 8.264e-19
Identity = 60/205 (29.27%), Postives = 98/205 (47.80%), Query Frame = -1
Query:  274 KVVLYFQPCGWFGAGRYEVDGYVYDAAEQPKILMTGKWNESM---------SYQPCDSEGE------------------PLPGTELKEV-------WRVADAPVDDK--YQYTYFTHKLNSFDTAPKKLLP-SDSRLRPDRYALEKGDLSKAGSEKSRLEERQRAEKRIREAKDDMFTPKWFDLSDEVTPTPWGDLEVYRYNGKY 777
            K VL F+PCG FG   ++V+GY+ D +++    + GKW E +         +Y+  D +                    P+P +E   +       WR+A  P +    Y +T F   LN  D   + ++P +D RLRPD  A+E G++ +A  EK RLEE+QRA ++ R   ++ +  +WF       P P+   + + Y+G Y
Sbjct:  738 KCVLNFKPCGLFGKELHKVEGYIQDKSKKKLCALYGKWTECLYSVDPATFDAYKKNDKKNTEEKKNSKQMSTSEELDEMPVPDSESVFIIPGSVLLWRIAPRPPNSAQMYNFTSFAMVLNEVDKDMESVIPKTDCRLRPDIRAMENGEIDQASEEKKRLEEKQRAARKNRSKSEEDWKTRWFHQG----PNPYNGAQDWIYSGSY 938          
BLAST of DN620340 vs. ExPASy Swiss-Prot
Match: OSH2_YEAST (Oxysterol-binding protein homolog 2 OS=Saccharomyces cerevisiae GN=OSH2 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.996e-18
Identity = 60/185 (32.43%), Postives = 91/185 (49.19%), Query Frame = -1
Query:  274 LYFQPCGWFGAGRYEVDGYVYDAAEQPKILMTGKWNESMSYQPCDSEGE---------------PLPGTELKEVWRVADAPVDDKYQYTYFTHKLNSFDTAPKKLL-----PSDSRLRPDRYALEKGDLSKAGSEKSRLEERQRAEKRIREAKDDMFTPKWFDLSDEVTPTPWGDLEVYRYNGKY 768
            LYF+  GW  +G YE+ G VY+  +Q   ++ G WNE++  +    +G+               P        +W+  D P ++ +  T F   LN    AP+  L     P+D+RLRPD+ A+E G   +AG EK R+EE+QRA +R RE  +  + P+WF         P    + +RY GKY
Sbjct: 1092 LYFKARGWRSSGAYEITGEVYNKKKQKVWILGGHWNEAIFAKKVVKDGDLSLEKTRTAASAGNGPTDDGTKFLIWKANDRP-EEPFNLTPFAITLN----APQPHLLPWLPPTDTRLRPDQRAMEDGRYDEAGDEKFRVEEKQRAARRKREENNLEYHPQWFVRDTH----PITKAKYWRYTGKY 1267          
BLAST of DN620340 vs. ExPASy Swiss-Prot
Match: OSH1_YEAST (Oxysterol-binding protein homolog 1 OS=Saccharomyces cerevisiae GN=OSH1 PE=1 SV=4)

HSP 1 Score: 89.3521 bits (220), Expect = 2.659e-17
Identity = 58/191 (30.37%), Postives = 93/191 (48.69%), Query Frame = -1
Query:  250 VLYFQPCGWFGAGRYEVDGYVYDAAEQPKILMTGKWNESMSYQPCDSEGEPLPGTELKE----------------VWRVADAPVDDKYQYTYFTHKLNSFDT-APKKLLPSDSRLRPDRYALEKGDLSKAGSEKSRLEERQRAEKRIREAKDDMFTPKWFDLSDEVTPTPWGDLEVYRYNGKYSELRATLD 771
            +L+++  GW  AG YEV G V++  ++   ++ G WN+S+  +   + G  L    +K                 +W+  + P    +  T F   LN+        L P+DSRLRPD+ A+E G+  KA +EK R+E +QRA K+ RE K + + PKWF   +     P      +++NG+Y   R   D
Sbjct:  995 MLHYKAHGWTSAGAYEVRGEVFNKDDKKLWVLGGHWNDSIYGKKVTARGGELTLDRIKTANSATGGPKLDGSKFLIWKANERP-SVPFNLTSFALTLNALPPHLIPYLAPTDSRLRPDQRAMENGEYDKAAAEKHRVEVKQRAAKKEREQKGEEYRPKWFVQEEH----PVTKSLYWKFNGEYWNKRKNHD 1180          
BLAST of DN620340 vs. ExPASy Swiss-Prot
Match: OSBL2_MOUSE (Oxysterol-binding protein-related protein 2 OS=Mus musculus GN=Osbpl2 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.472e-17
Identity = 60/216 (27.78%), Postives = 96/216 (44.44%), Query Frame = -1
Query:  268 KVVLYFQPCGWFGAGRYEVDGYVYDAAEQPKILMTGKWNESM---------SYQPCDSEGEP----------------------------------LPGTELKEVWRVADAPVDDK--YQYTYFTHKLNSFDTAPKKLLP-SDSRLRPDRYALEKGDLSKAGSEKSRLEERQRAEKRIREAKDDMFTPKWFDLSDEVTPTPWGDLEVYRYNGKYSE 777
            K +L+F+PCG FG   + V+GY+ D   +   +M GKW E +         S++  +  G+                                   +PG++L  +WR+   P +    Y +T FT  LN  ++  +K LP +D RLRPD   +E G++  A  EK RLEE+QR  ++ R  +D  +  +WF   +     P+     + Y G Y E
Sbjct:  265 KCILHFKPCGLFGKELHRVEGYIQDKNRKKLFIMYGKWTECLWGIDPASYESFKKQEKRGDQARKAKMDDGPEKANSDVPGDVADDVPVAQETVQVIPGSKL--LWRINSRPPNSAQMYNFTSFTVSLNELESGMEKTLPPTDCRLRPDIRGMENGNMDLASQEKERLEEKQREARKERAKEDAEWRTRWFSPGN----NPYTGAPDWLYAGHYFE 474          
BLAST of DN620340 vs. ExPASy Swiss-Prot
Match: OSBL2_HUMAN (Oxysterol-binding protein-related protein 2 OS=Homo sapiens GN=OSBPL2 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.923e-17
Identity = 60/210 (28.57%), Postives = 96/210 (45.71%), Query Frame = -1
Query:  268 KVVLYFQPCGWFGAGRYEVDGYVYDAAEQPKILMTGKWNESM---------SYQPCDSEGEPLPGTELKE----------------------------VWRVADAPVDDK--YQYTYFTHKLNSFDTAPKKLLP-SDSRLRPDRYALEKGDLSKAGSEKSRLEERQRAEKRIREAKDDMFTPKWFDLSDEVTPTPWGDLEVYRYNGKYSE 777
            K VL+F+PCG FG   ++V+G++ D  ++   ++ GKW E +         S++  +  G+ L   +L E                            +WR+   P +    Y +T FT  LN  +T  +K LP +D RLRPD   +E G++  A  EK RLEE+QR  +R R  ++  +  +WF   +     P+     + Y G Y E
Sbjct:  265 KCVLHFKPCGLFGKELHKVEGHIQDKNKKKLFMIYGKWTECLWGIDPVSYESFKKQERRGDHLRKAKLDEDSGKADSDVADDVPVAQETVQVIPGSKLLWRINTRPPNSAQMYNFTSFTVSLNELETGMEKTLPPTDCRLRPDIRGMENGNMDLASQEKERLEEKQREARRERAKEEAEWQTRWFYPGN----NPYTGTPDWLYAGDYFE 470          
BLAST of DN620340 vs. ExPASy Swiss-Prot
Match: YB35_SCHPO (Oxysterol-binding protein homolog C2F12.05c OS=Schizosaccharomyces pombe GN=SPBC2F12.05c PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 7.735e-17
Identity = 61/191 (31.94%), Postives = 95/191 (49.74%), Query Frame = -1
Query:  205 VLYFQPCGWFGAGRYEVDGYVYDAAEQPKILMTGKWNESMSYQPCDSEGEPLPGTELKEVWRVADAPVDDKYQYTYFTHKLNSFDTAPKKLLP-SDSRLRPDRYALEKGDLSKAGSEKSRLEERQRAEKRIREAKD-DMFTPKWFDLSDEVTPTPWGDLEVYRYNGKYSELRATLDNSESLGEINPETTEF 771
            VL F+P GW G   +EV G V    + PK ++ G WN+ +  Q         P      +W+  + P    +  T F   LN+     K  LP +D+RLRPD+ A+E G    A SEK+RLEE+QR ++R+RE  +   ++P+WF  +      P    + +++N +Y ++R      E  GE +    EF
Sbjct: 1130 VLDFKPRGWRGTNAHEVKGSVQSTDDTPKWMVNGHWNDKIFGQQ--------PNGNKILLWQNHERP-PRPFNLTPFAISLNALTPQLKPWLPPTDTRLRPDQRAMENGQYDLAASEKNRLEEKQRKKRRMREQGEMPPWSPRWFSAAKH----PVTGEDYWQFNNEYWKIR------EEAGEAHLAGKEF 1301          
BLAST of DN620340 vs. ExPASy Swiss-Prot
Match: OSBL3_HUMAN (Oxysterol-binding protein-related protein 3 OS=Homo sapiens GN=OSBPL3 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.613e-14
Identity = 54/172 (31.40%), Postives = 87/172 (50.58%), Query Frame = -1
Query:  241 WFGAGRYEVDGYVYDAAEQPKILMTGKWNESMSYQPCDSEGEPLPGTELKEVWRVADAP--VDDKYQYTYFTHKLNSFDTAPKKLLP-SDSRLRPDRYALEKGDLSKAGSEKSRLEERQRAEKRIREAKDDMFTPKWFDLSDEVTPTPWGDLEVYRYNGKYSELRATLDNSE 747
            ++    +E++G V+D + +    + GKW+ES+    C        G+    VWR    P   +  Y +T F  +LN  D + K LLP +D+R RPD+  LE+G+L +A  +K R+E+ QR  +R+ E       P++F  SD+         + +  NG Y ELR  L  S+
Sbjct:  727 YWSTNAHEIEGTVFDRSGKAVHRLFGKWHESIY---CGG------GSSSACVWRANPMPKGYEQYYSFTQFALELNEMDPSSKSLLPPTDTRFRPDQRFLEEGNLEEAEIQKQRIEQLQRERRRVLEENHVEHQPRFFRKSDD---------DSWVSNGTYLELRKDLGFSK 880          
The following BLAST results are available for this feature:
BLAST of DN620340 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
OSBL1_RAT2.840e-1930.24Oxysterol-binding protein-related protein 1 OS=Rat... [more]
OSB8_DICDI4.845e-1937.29Oxysterol-binding protein 8 OS=Dictyostelium disco... [more]
OSBL1_MOUSE6.328e-1929.76Oxysterol-binding protein-related protein 1 OS=Mus... [more]
OSBL1_HUMAN8.264e-1929.27Oxysterol-binding protein-related protein 1 OS=Hom... [more]
OSH2_YEAST6.996e-1832.43Oxysterol-binding protein homolog 2 OS=Saccharomyc... [more]
OSH1_YEAST2.659e-1730.37Oxysterol-binding protein homolog 1 OS=Saccharomyc... [more]
OSBL2_MOUSE3.472e-1727.78Oxysterol-binding protein-related protein 2 OS=Mus... [more]
OSBL2_HUMAN5.923e-1728.57Oxysterol-binding protein-related protein 2 OS=Hom... [more]
YB35_SCHPO7.735e-1731.94Oxysterol-binding protein homolog C2F12.05c OS=Sch... [more]
OSBL3_HUMAN1.613e-1431.40Oxysterol-binding protein-related protein 3 OS=Hom... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_05C22_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0005C22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN620340 ID=DN620340; Name=DN620340; organism=Citrus sinensis; type=EST; length=810bp
GGGGGGGGGGGGCGGGCCCGCTTTTTTTTGTCGACGAAAAACCAAGCTCC
ATTTTCAGATTTAAAAGATTCTATCACAATTGAAACTAGGTAACACAATA
ATAATAATACTGCATAAAGAATCAAATAATGCATAAAATACATCATAGGA
AATCATTGCGTGATTTACTCATTCAGCAGCCGAGTCTTCATATTGCCACG
GGTTGAATTCGGTTGTCTCAGGGTTAATCTCTCCAAGGCTTTCTGAATTA
TCTAGAGTAGCCCGAAGTTCAGAATACTTGCCATTGTACCGGTACACTTC
CAAGTCACCCCAAGGAGTAGGGGTGACTTCATCACTAAGGTCAAACCATT
TTGGAGTAAACATATCATCTTTGGCCTCACGGATTCTTTTTTCAGCTCTC
TGTCTCTCCTCCAATCTGCTCTTCTCGGAACCAGCTTTGGAAAGGTCACC
CTTCTCCAGTGCATATCTATCAGGACGTAAACGAGAATCTGATGGCAACA
ACTTCTTAGGAGCAGTGTCAAAGCTGTTTAACTTGTGCGTAAAATATGTG
TACTGGTATTTGTCATCTACAGGAGCATCAGCCACTCTCCAAACCTCCTT
CAATTCGGTGCCTGGAAGTGGCTCCCCCTCTGAGTCGCAGGGCTGGTAAC
TCATTGATTCATTCCATTTCCCAGTCATCAATATCTTGGGTTGTTCAGCA
GCATCATATACATATCCATCCACTTCATAGCGACCAGCTCCAAACCATCC
GCATGGTTGAAAATATAACACAACTTTTCTCGCCCGTGGTCAAGTTAGTC
ATGACCATAT
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