DN620336

Overview
NameDN620336
Unique NameDN620336
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length780
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN620336 vs. ExPASy Swiss-Prot
Match: MOMAS_ORYSJ (Momilactone A synthase OS=Oryza sativa subsp. japonica GN=Os04g0179200 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.787e-37
Identity = 83/152 (54.61%), Postives = 106/152 (69.74%), Query Frame = -3
Query:  314 KSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKG-GVDPALIESSMSQMGNLKGE-FLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVVN 763
            K D ER++ VN +G FLG KHAARVM P ++G I+ TAS  + ++G  S AYT SK+ ++G  +  A ELG++GIRVNCVSP G+AT ++    G+D   IE+ M+   NLKG   LK D IA AAL+LASD+  YVSGQNL VDGG SVVN
Sbjct:  115 KEDFERVLAVNLVGPFLGTKHAARVMAPARRGSIISTASLSSSVSGAASHAYTTSKHALVGFTENAAGELGRHGIRVNCVSPAGVATPLARAAMGMDDEAIEAIMANSANLKGAGALKADDIAAAALFLASDDGRYVSGQNLRVDGGLSVVN 266          
BLAST of DN620336 vs. ExPASy Swiss-Prot
Match: ABA2_ARATH (Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN=ABA2 PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.033e-31
Identity = 71/156 (45.51%), Postives = 99/156 (63.46%), Query Frame = -3
Query:  314 SDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSM-------SQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVVN 760
            S+ E   +VN  G FL  KHAARVM+P++KG I+   S    + G+G  +Y  SK+ +LGL + +AAELGQ+GIRVNCVSPY +AT +++    +    E +        +   NLKG  L  D +ANA L+LASD+S Y+SG NL++DGGF+  N
Sbjct:  123 SEFEMTFDVNVKGAFLSMKHAARVMIPEKKGSIVSLCSVGGVVGGVGPHSYVGSKHAVLGLTRSVAAELGQHGIRVNCVSPYAVATKLALAHLPEEERTEDAFVGFRNFAAANANLKGVELTVDDVANAVLFLASDDSRYISGDNLMIDGGFTCTN 278          
BLAST of DN620336 vs. ExPASy Swiss-Prot
Match: TS2_MAIZE (Sex determination protein tasselseed-2 OS=Zea mays GN=TS2 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.062e-28
Identity = 73/176 (41.48%), Postives = 98/176 (55.68%), Query Frame = -3
Query:  329 ILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGM---SMKGGVDPAL-----------------------IESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 778
            IL    ++ +R++ VN +G  LG KHAAR M P++ G I+  AS    + GLG  AYT SK+ I+GL K  A EL  +G+RVNCVSP+G+AT M   + + G D A                        +E  +  +  LKG  L+   IA A L+LASDE+ Y+SG NLVVDGG
Sbjct:  151 ILSFDAAEFDRVLRVNALGAALGMKHAARAMAPRRAGSIVSVASVAAVLGGLGPHAYTASKHAIVGLTKNAACELRAHGVRVNCVSPFGVATPMLINAWRQGHDDATADADRDLDLDLDVTVPSDQEVEKMEEVVRGLATLKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGG 326          
BLAST of DN620336 vs. ExPASy Swiss-Prot
Match: YGCW_ECOLI (Uncharacterized oxidoreductase ygcW OS=Escherichia coli (strain K12) GN=ygcW PE=3 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 2.234e-18
Identity = 54/154 (35.06%), Postives = 89/154 (57.79%), Query Frame = -3
Query:  320 ILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQM-GNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSV 778
            +LD  ++D + +I+VN    F  +  AA++M+PQ+ G I+   S  + + G  SPAY+ +K+ + G  K    ELGQY I+VN ++P   AT +++    +P   +  +  +  N  G+   T  +  AA++LAS  S+YV+G  LVVDGG+ V
Sbjct:  110 VLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGD---TQDLMGAAVFLASPASNYVNGHLLVVDGGYLV 260          
BLAST of DN620336 vs. ExPASy Swiss-Prot
Match: BACC2_BACSU (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus subtilis GN=bacC PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.186e-17
Identity = 54/155 (34.84%), Postives = 85/155 (54.84%), Query Frame = -3
Query:  323 SDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKT---------DGIANAALYLASDESSYVSGQNLVVDGGFS 760
            S+  +++NVN  G FL +KHA + M+   KG I+ T S    +A    PAY  SK G+L L + +A +  ++ IRVNCV P  + T ++ K     + +E++   +  +K E  K          + IAN  L+LASD SSY++G  +  DGG++
Sbjct:  102 SNWNKVLNVNLTGMFLMSKHALKYMLKSGKGNIINTCSVGGVVAWPDIPAYNASKGGVLQLTRSMAVDYAKHNIRVNCVCPGIIDTPLNEK-----SFLENNEGTLEEIKKEKAKVNPLLRLGKPEEIANVMLFLASDLSSYMTGSAITADGGYT 251          
BLAST of DN620336 vs. ExPASy Swiss-Prot
Match: BACC_BACSU (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus subtilis GN=bacC PE=3 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 2.091e-16
Identity = 55/155 (35.48%), Postives = 84/155 (54.19%), Query Frame = -3
Query:  323 SDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKT---------DGIANAALYLASDESSYVSGQNLVVDGGFS 760
            SD  +++ VN  G FL +KHA + M+   KG I+ T S    +A    PAY  SK G+L L K +A +  ++ IRVNCV P  + T ++ K     + +E++   +  +K E  K          + IAN  L+LASD SSY++G  +  DGG++
Sbjct:  102 SDWNKVLQVNLTGMFLMSKHALKHMLAAGKGNIINTCSVGGLVAWPDIPAYNASKGGVLQLTKSMAVDYAKHQIRVNCVCPGIIDTPLNEK-----SFLENNEGTLEEIKKEKAKVNPLLRLGKPEEIANVMLFLASDLSSYMTGSAITADGGYT 251          
BLAST of DN620336 vs. ExPASy Swiss-Prot
Match: YOHF_ECOLI (Uncharacterized oxidoreductase yohF OS=Escherichia coli (strain K12) GN=yohF PE=3 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.498e-14
Identity = 53/156 (33.97%), Postives = 88/156 (56.41%), Query Frame = -3
Query:  311 LDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL-GSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVVNP 775
            LD    +  ++  V+  G FL ++ AAR MV Q +G  +   ++  E   L  + AYT +K+ + GL K +A EL ++ I VN V+P  +AT M+   G+D + ++        L+  F  T  IA+  ++L S+ ++Y +GQ+L+VDGGF + NP
Sbjct:   97 LDMAFDEWRKIFTVDVDGAFLCSQIAARQMVKQGQGGRIINITSVHEHTPLPDASAYTAAKHALGGLTKAMALELVRHKILVNAVAPGAIATPMN---GMDDSDVKPDAEPSIPLR-RFGATHEIASLVVWLCSEGANYTTGQSLIVDGGFMLANP 248          
BLAST of DN620336 vs. ExPASy Swiss-Prot
Match: FABG_THEMA (3-oxoacyl-[acyl-carrier-protein] reductase OS=Thermotoga maritima GN=fabG PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.498e-14
Identity = 52/148 (35.14%), Postives = 79/148 (53.38%), Query Frame = -3
Query:  320 KSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSV 763
            + D + +INVN  G F   +     M+ Q+ G I+  +S        G   Y  SK G++G+ K  A EL    IRVN V+P  + T M+ K  +     E+++S++    G F K + +A   L+LASDESSYV+GQ + +DGG  +
Sbjct:  103 EEDWDAVINVNLKGVFNVTQMVVPYMIKQRNGSIVNVSSVVGIYGNPGQTNYAASKAGVIGMTKTWAKELAGRNIRVNAVAPGFIETPMTEK--LPEKARETALSRIP--LGRFGKPEEVAQVILFLASDESSYVTGQVIGIDGGLVI 246          
BLAST of DN620336 vs. ExPASy Swiss-Prot
Match: CBR4_XENTR (Carbonyl reductase family member 4 OS=Xenopus tropicalis GN=cbr4 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.498e-14
Identity = 54/153 (35.29%), Postives = 80/153 (52.29%), Query Frame = -3
Query:  320 ILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSV 778
            +L T   D+  L++VN +G     K A R M+ QQ G I+   S       +G   Y  SK G++G  K LA E+ +  IRVN V+P  + T M++       L E S+++M  L G F   + +A + L+L   ES Y++G  LVVDGG  +
Sbjct:   91 LLRTRSEDIRSLLSVNLVGTIQTCKLALRSMIQQQGGAIVNIGSIVGHKGNIGQSIYGASKEGLIGFSKSLAKEVAKRNIRVNVVAPGFIHTDMTL------GLEEDSLTKMVPL-GRFGDPEEVAQSVLFLL--ESPYITGHVLVVDGGLQL 234          
BLAST of DN620336 vs. ExPASy Swiss-Prot
Match: DHB8_RAT (Estradiol 17-beta-dehydrogenase 8 OS=Rattus norvegicus GN=Hsd17b8 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.556e-14
Identity = 50/151 (33.11%), Postives = 84/151 (55.63%), Query Frame = -3
Query:  329 ILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 778
            +L   + D +R+I VN  G FL  + AA+ +V    +G I+  +S   ++  +G   Y  SK G++GL +  A ELG++GIR N V P  +AT M+ K    P  ++  ++ M  L G     + +A+   +LAS++S Y++G ++ V GG
Sbjct:  110 LLHMSEEDWDRVIAVNLKGTFLVTQAAAQALVSSGGRGSIINISSIVGKVGNIGQTNYASSKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQK---MPEKVKDKVTAMIPL-GHMGDPEDVADVVAFLASEDSGYITGASVEVSGG 256          
The following BLAST results are available for this feature:
BLAST of DN620336 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
MOMAS_ORYSJ4.787e-3754.61Momilactone A synthase OS=Oryza sativa subsp. japo... [more]
ABA2_ARATH1.033e-3145.51Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN... [more]
TS2_MAIZE4.062e-2841.48Sex determination protein tasselseed-2 OS=Zea mays... [more]
YGCW_ECOLI2.234e-1835.06Uncharacterized oxidoreductase ygcW OS=Escherichia... [more]
BACC2_BACSU7.186e-1734.84Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]
BACC_BACSU2.091e-1635.48Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]
YOHF_ECOLI1.498e-1433.97Uncharacterized oxidoreductase yohF OS=Escherichia... [more]
FABG_THEMA1.498e-1435.143-oxoacyl-[acyl-carrier-protein] reductase OS=Ther... [more]
CBR4_XENTR1.498e-1435.29Carbonyl reductase family member 4 OS=Xenopus trop... [more]
DHB8_RAT2.556e-1433.11Estradiol 17-beta-dehydrogenase 8 OS=Rattus norveg... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_05C20_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0005C20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN620336 ID=DN620336; Name=DN620336; organism=Citrus sinensis; type=EST; length=780bp
TTTTTTTTTTTTTTTTTAGTGCACAGAGAGTCCGTGATATCTTCAAATAA
GATTTCCAATAGACATACACATAACAAAATAGAGCTCTTTTCATAATAGT
AGACCAAACTAGCTGAAGTAGTAATGGATTTGCCAGAAACTGAACTATTG
TAAATGTGGTTTCAAATATGATAATTGGAAGCAAATTTGTGAATTATTTT
TCAAAATGAATGCATTCTTACACGTACGCAGCAGAGTACGGCATCCCCCA
TTATCTACAAATTAAAGCTCCAATTGATTACTTGATAAGACCGTAAGCCC
TCATAACTGTAGGATTCACCACGCTGAATCCTCCATCCACAACAAGATTT
TGCCCGCTCACATAACTTGATTCATCACTAGCCAAATAGAGGGCAGCATT
TGCAATGCCATCAGTTTTTAGAAATTCCCCTTTTAGATTACCCATCTGGC
TCATTGATGATTCTATTAGAGCCGGATCGACCCCACCTTTCATCGACATT
CCTGTCGCCAAACCATAAGGCGAGACGCAATTTACTCTTATTCCATACTG
TCCAAGCTCTGCTGCCAAGCACTTTACTAGTCCTAAAATCCCATATTTGG
ATATTGTATAAGCAGGGGAGCCAAGCCCTGCAATTTCTGTACAAGCACTA
GCTGTAAACAGTATGCAACCTTTTTGCTGTGGCACCATGACTCTTGCAGC
ATGCTTGGCTCCTAAGAAACCACCTATAGTGTTTACATTAATTAAGCGTT
CTAGATCAGACTTTGGAGTGTCCAAAATGC
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