DN620321

Overview
NameDN620321
Unique NameDN620321
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length810
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN620321 vs. ExPASy Swiss-Prot
Match: TM111_PONAB (Transmembrane protein 111 OS=Pongo abelii GN=TMEM111 PE=2 SV=3)

HSP 1 Score: 168.318 bits (425), Expect = 4.474e-41
Identity = 88/200 (44.00%), Postives = 125/200 (62.50%), Query Frame = -3
Query:  221 EGQVIVRARNLRAGANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMM-QMSGFGF----DPSKSLGAEKDSLDIIQHEWALPKFEQRAETVLKDL 805
            + QV++R+R LR    +I  +SF  R+ YF N E+G     K +         +DP M  DMMK N++ ++P  L   W+N  FSGFV  K+PFPLT RF+ MLQ GI+L T+D S+VSS SWYFLN+FGLR ++SLILG++NA D ++ M  QM+G       D +K+   E ++L++  H+WAL   E+  E + KDL
Sbjct:   51 DSQVLIRSRVLRENGKYIPKQSFLTRKYYFNNPEDGFFKKTKRKV--VPPSPMTDPTMLTDMMKGNVTNVLPMILIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSIYSLILGQDNAADQSRMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALDDVEE--ELMAKDL 246          
BLAST of DN620321 vs. ExPASy Swiss-Prot
Match: TM111_HUMAN (Transmembrane protein 111 OS=Homo sapiens GN=TMEM111 PE=1 SV=3)

HSP 1 Score: 168.318 bits (425), Expect = 4.474e-41
Identity = 88/200 (44.00%), Postives = 125/200 (62.50%), Query Frame = -3
Query:  221 EGQVIVRARNLRAGANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMM-QMSGFGF----DPSKSLGAEKDSLDIIQHEWALPKFEQRAETVLKDL 805
            + QV++R+R LR    +I  +SF  R+ YF N E+G     K +         +DP M  DMMK N++ ++P  L   W+N  FSGFV  K+PFPLT RF+ MLQ GI+L T+D S+VSS SWYFLN+FGLR ++SLILG++NA D ++ M  QM+G       D +K+   E ++L++  H+WAL   E+  E + KDL
Sbjct:   51 DSQVLIRSRVLRENGKYIPKQSFLTRKYYFNNPEDGFFKKTKRKV--VPPSPMTDPTMLTDMMKGNVTNVLPMILIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSIYSLILGQDNAADQSRMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALDDVEE--ELMAKDL 246          
BLAST of DN620321 vs. ExPASy Swiss-Prot
Match: TM111_BOVIN (Transmembrane protein 111 OS=Bos taurus GN=TMEM111 PE=2 SV=3)

HSP 1 Score: 167.933 bits (424), Expect = 5.844e-41
Identity = 88/200 (44.00%), Postives = 125/200 (62.50%), Query Frame = -3
Query:  221 EGQVIVRARNLRAGANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMM-QMSGFGF----DPSKSLGAEKDSLDIIQHEWALPKFEQRAETVLKDL 805
            + QV++R+R LR    +I  +SF  R+ YF N E+G     K +         +DP M  DMMK N++ ++P  L   W+N  FSGFV  K+PFPLT RF+ MLQ GI+L T+D S+VSS SWYFLN+FGLR ++SLILG++NA D ++ M  QM+G       D +K+   E ++L++  H+WAL   E+  E + KDL
Sbjct:   51 DSQVLIRSRVLRENGKYIPKQSFLTRKYYFNNPEDGFFKKTKRKV--VPPSPVTDPTMLTDMMKGNVTNVLPMILIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSIYSLILGQDNAADQSRMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALDDVEE--ELMAKDL 246          
BLAST of DN620321 vs. ExPASy Swiss-Prot
Match: TM111_DANRE (Transmembrane protein 111 OS=Danio rerio GN=tmem111 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 7.632e-41
Identity = 87/200 (43.50%), Postives = 128/200 (64.00%), Query Frame = -3
Query:  221 EGQVIVRARNLRAGANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMM-QMSGFGF----DPSKSLGAEKDSLDIIQHEWALPKFEQRAETVLKDL 805
            + QV++R+R LR    +I  +SF  R+ YF N+E+G     K +         +DP+M  DMMK N++ ++P  L   W+N+ FSGFV  K+PFPLT RF+ MLQ GI+L ++D S+VSS SWYFLN+FGLR ++SLILG++N  D ++ M  QMSG       D +K+  AE ++L++  H+WAL   E+  + + KDL
Sbjct:   51 DSQVLIRSRVLRENGKYIPKQSFLMRKFYFNNQEDGFFKKTKRKV--VPPSPMTDPSMLTDMMKGNVTNVLPMILIGGWINWTFSGFVTTKVPFPLTLRFKPMLQQGIELLSLDASWVSSASWYFLNVFGLRSMYSLILGQDNGADQSRIMQEQMSGAAMAMPADTNKAFKAEWEALELTDHQWALENVEE--DLMSKDL 246          
BLAST of DN620321 vs. ExPASy Swiss-Prot
Match: TM111_RAT (Transmembrane protein 111 OS=Rattus norvegicus GN=Tmem111 PE=2 SV=3)

HSP 1 Score: 167.162 bits (422), Expect = 9.968e-41
Identity = 87/200 (43.50%), Postives = 125/200 (62.50%), Query Frame = -3
Query:  221 EGQVIVRARNLRAGANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMM-QMSGFGF----DPSKSLGAEKDSLDIIQHEWALPKFEQRAETVLKDL 805
            + QV++R+R LR    +I  +SF  R+ YF N E+G     K +         +DP M  DMMK N++ ++P  L   W+N  FSGFV  K+PFPLT RF+ MLQ GI+L T+D S+VSS SWYFLN+FGLR ++SLILG++NA D ++ M  QM+G       D +K+   E ++L++  H+WAL   E+  E + +DL
Sbjct:   51 DSQVLIRSRVLRENGKYIPKQSFLTRKYYFNNPEDGFFKKTKRKV--VPPSPMTDPTMLTDMMKGNVTNVLPMILIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSIYSLILGQDNAADQSRMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALDDVEE--ELMARDL 246          
BLAST of DN620321 vs. ExPASy Swiss-Prot
Match: TM111_MOUSE (Transmembrane protein 111 OS=Mus musculus GN=Tmem111 PE=2 SV=3)

HSP 1 Score: 167.162 bits (422), Expect = 9.968e-41
Identity = 87/200 (43.50%), Postives = 125/200 (62.50%), Query Frame = -3
Query:  221 EGQVIVRARNLRAGANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMM-QMSGFGF----DPSKSLGAEKDSLDIIQHEWALPKFEQRAETVLKDL 805
            + QV++R+R LR    +I  +SF  R+ YF N E+G     K +         +DP M  DMMK N++ ++P  L   W+N  FSGFV  K+PFPLT RF+ MLQ GI+L T+D S+VSS SWYFLN+FGLR ++SLILG++NA D ++ M  QM+G       D +K+   E ++L++  H+WAL   E+  E + +DL
Sbjct:   51 DSQVLIRSRVLRENGKYIPKQSFLTRKYYFNNPEDGFFKKTKRKV--VPPSPMTDPTMLTDMMKGNVTNVLPMILIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSIYSLILGQDNAADQSRMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALDDVEE--ELMARDL 246          
BLAST of DN620321 vs. ExPASy Swiss-Prot
Match: YNY3_SCHPO (UPF0347 membrane protein C1711.03 OS=Schizosaccharomyces pombe GN=SPBC1711.03 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.443e-31
Identity = 76/204 (37.25%), Postives = 118/204 (57.84%), Query Frame = -3
Query:  245 KEGQVIVRARNLRAGANFISPKSFRARRVYFCN--EENGLLHVPKGQAQNAQAQMFSDPNMA--MDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMMQMSGF------------GFDPSKSLGAEKDSLDIIQHEWALPKFEQR 808
            +E +++ RA  LRA +N + P+S  AR+ +     +    L      A  A   +  D  +   M+ MK N+ M++PQT+   W+N FFSGF+  K+PFPLT RF+S+ Q+G+    +DV +VSS SWYFLNLFGL+ +++L+LGE NA  +    M M+GF            G D SK + +E +++ I+++E  L   E+R
Sbjct:   49 REQRLLQRAYALRACSNSLLPESIEARKCFLIESLKSGKYLKPVDPNAPKAANPLMDDKTLEGLMESMKGNMLMVVPQTIIMTWINEFFSGFILLKLPFPLTLRFKSIFQSGVATQDLDVQWVSSISWYFLNLFGLKSVYALLLGENNAASNATNEMGMAGFSSAAATAQLIQPGQDISKMMLSEAENVQILKNESLLVDVEKR 252          
BLAST of DN620321 vs. ExPASy Swiss-Prot
Match: TM111_DICDI (Transmembrane protein 111 homolog OS=Dictyostelium discoideum GN=tmem111 PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.950e-28
Identity = 79/204 (38.73%), Postives = 115/204 (56.37%), Query Frame = -3
Query:  245 QVIVRARNLRAGANFISPKSFRARRVYFCNE-----ENGLLH--VPKGQAQNAQAQMFS-----DPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPF-PLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMMQMSGFGFDPS------KSLGAEKDSLDIIQHEWALPKFEQR 799
            Q I R R L +  N I  KSF  R+ Y C         G+L    P  +  N    MF+     DP+   DM+K N+  +IPQ    +WVN FFSGFVA K+PF PLT RF++ LQ GI++ ++DVSYVSS SWYFL  FG  G+ +++LGE   + D+Q ++Q S     P+      K   +EK+++++I+++  +   E R
Sbjct:   55 QTINRVRRLVSFYNRIPQKSFFIRKAYLCGTTGSKTNKGILSSIAPTQEDSNPMNMMFANSMFTDPSGITDMLKGNIMHLIPQVTMMSWVNHFFSGFVACKLPFFPLTIRFKTFLQRGIEMGSLDVSYVSSLSWYFLCWFGSEGINAILLGENMVSADSQ-LLQSSIEPGPPTQQTPIHKIYASEKENIEMIRYDSLMTNIEDR 257          
BLAST of DN620321 vs. ExPASy Swiss-Prot
Match: EMC3_YEAS6 (ER membrane protein complex subunit 3 OS=Saccharomyces cerevisiae (strain AWRI1631) GN=AIM27 PE=3 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 3.221e-23
Identity = 71/205 (34.63%), Postives = 106/205 (51.71%), Query Frame = -3
Query:  245 EGQVIVRARNLRAGANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQA-----QMFSDPNMA---MDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMMQMSGFG----------FDPSKSLGAEKDSLDIIQHEWALPKFEQR 805
            E Q +  A+ L      +S  +F A++ +   +     H+ K + Q           F+DPNM+   M+M K N++  IPQT+   WVN FF+GF+  ++PFPLT +F+ MLQ GI    +DV +VSS SWYF+++ GL  +++LI       +D Q M   +G G              K++ A  + L IIQHE  L   EQR
Sbjct:   49 EWQYLQWAQLLIGNGGNLSSDAFAAKKEFLVKDLTEERHLAKAKQQGGSQAGEVPNPFNDPNMSNAMMNMAKGNMASFIPQTIIMWWVNHFFAGFILMQLPFPLTAKFKEMLQTGIICQDLDVRWVSSISWYFISVLGLNPVYNLI-----GLND-QDMGIQAGIGGPQGPQGPPQSQVDKAMHAMANDLTIIQHETCLDNVEQR 247          
BLAST of DN620321 vs. ExPASy Swiss-Prot
Match: EMC3_YEAS1 (ER membrane protein complex subunit 3 OS=Saccharomyces cerevisiae (strain RM11-1a) GN=AIM27 PE=3 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 3.221e-23
Identity = 71/205 (34.63%), Postives = 106/205 (51.71%), Query Frame = -3
Query:  245 EGQVIVRARNLRAGANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQA-----QMFSDPNMA---MDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMMQMSGFG----------FDPSKSLGAEKDSLDIIQHEWALPKFEQR 805
            E Q +  A+ L      +S  +F A++ +   +     H+ K + Q           F+DPNM+   M+M K N++  IPQT+   WVN FF+GF+  ++PFPLT +F+ MLQ GI    +DV +VSS SWYF+++ GL  +++LI       +D Q M   +G G              K++ A  + L IIQHE  L   EQR
Sbjct:   49 EWQYLQWAQLLIGNGGNLSSDAFAAKKEFLVKDLTEERHLAKAKQQGGSQAGEVPNPFNDPNMSNAMMNMAKGNMASFIPQTIIMWWVNHFFAGFILMQLPFPLTAKFKEMLQTGIICQDLDVRWVSSISWYFISVLGLNPVYNLI-----GLND-QDMGIQAGIGGPQGPQGPPQSQVDKAMHAMANDLTIIQHETCLDNVEQR 247          
The following BLAST results are available for this feature:
BLAST of DN620321 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
TM111_PONAB4.474e-4144.00Transmembrane protein 111 OS=Pongo abelii GN=TMEM1... [more]
TM111_HUMAN4.474e-4144.00Transmembrane protein 111 OS=Homo sapiens GN=TMEM1... [more]
TM111_BOVIN5.844e-4144.00Transmembrane protein 111 OS=Bos taurus GN=TMEM111... [more]
TM111_DANRE7.632e-4143.50Transmembrane protein 111 OS=Danio rerio GN=tmem11... [more]
TM111_RAT9.968e-4143.50Transmembrane protein 111 OS=Rattus norvegicus GN=... [more]
TM111_MOUSE9.968e-4143.50Transmembrane protein 111 OS=Mus musculus GN=Tmem1... [more]
YNY3_SCHPO1.443e-3137.25UPF0347 membrane protein C1711.03 OS=Schizosacchar... [more]
TM111_DICDI1.950e-2838.73Transmembrane protein 111 homolog OS=Dictyostelium... [more]
EMC3_YEAS63.221e-2334.63ER membrane protein complex subunit 3 OS=Saccharom... [more]
EMC3_YEAS13.221e-2334.63ER membrane protein complex subunit 3 OS=Saccharom... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_05C11_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0005C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN620321 ID=DN620321; Name=DN620321; organism=Citrus sinensis; type=EST; length=810bp
TTTTTTTTTTTTTTTTTAGTAAAACCAAAAATTTCTCAAATAATGATGCT
TAACTTACAAGATAAAACTGGGAATTAAAACAGTGGTTTATAGAAGATTT
AAAGTCATGCTGGCTTCAAAGCCGTTCCCAGATGTCCACCAAATGGATGA
AAATCACCAAGGAACCATTCCCGATGCTATAATTCAACAAATAACAACAG
ATCACCATTGTTCAACCGACAAGATCTTTCAATACTGTTTCAGCACGCTG
CTCAAATTTTGGTAAGGCCCATTCATGCTGAATTATGTCCAGACTGTCTT
TCTCAGCACCCAAGCTCTTGCTTGGGTCAAAGCCAAACCCACTCATTTGC
ATCATACGCTGAGTATCATCAGTAGCATTTTCTTCCCCCAGAATGAGGCT
AAATAAACCCCTCAGTCCAAACAAATTGAGGAAGTACCATGAACGACTAC
TGACATAGCTTACATCAACAGTGCTCAAGTCAATCCCATTTTGTAACATT
GACCTGAACCTCTGAGTCAGTGGGAATGGTATCTTGGCTGCAACAAACCC
AGAGAAGAAAAAGTTGACCCAAGCAAAAGTAAGGGTCTGGGGTATGATCA
TTGAAAGATTTTTCTTCATCATGTCCATTGCCATGTTAGGATCGGAAAAC
ATTTGCGCTTGCGCATTTTGTGCCTGACCCTTTGGCACATGCAACAATCC
ATTTTCCTCGTTACAGAAATAAACTCTGCGAGCGCGAAAAGACTTTGGAG
AGATAAAATTAGCGCCAGCACGCAAATTCCGCGCCCTAACAATCACTTGT
CCTTCTTTAA
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