EY667918

Overview
NameEY667918
Unique NameEY667918
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY667918 vs. ExPASy Swiss-Prot
Match: APG2_ARATH (GDSL esterase/lipase APG OS=Arabidopsis thaliana GN=APG PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.954e-20
Identity = 52/97 (53.61%), Postives = 63/97 (64.95%), Query Frame = 3
Query:  114 PAIITFGDSARHVANNHYLATLFLDTYPPYGMDFINQQPTGRFPHGKLSTDFAADTRRFKTHAPGYLSPYATGKNHHYRSQLSFSRGSGYDGQDILL 404
            PAI+TFGDS   V NN+YL TLF   YPPYG DF N + TGRF +GKL+TD  A+T  F  + P YLSP A+GKN    +  + S  SGYD +  LL
Sbjct:   29 PAIMTFGDSVVDVGNNNYLPTLFRADYPPYGRDFANHKATGRFCNGKLATDITAETLGFTKYPPAYLSPEASGKNLLIGANFA-SAASGYDDKAALL 124          
BLAST of EY667918 vs. ExPASy Swiss-Prot
Match: GDL78_ARATH (GDSL esterase/lipase At5g22810 OS=Arabidopsis thaliana GN=At5g22810 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 6.375e-15
Identity = 41/92 (44.57%), Postives = 53/92 (57.61%), Query Frame = 3
Query:  114 PAIITFGDSARHVANNHYLATLFLDTYPPYGMDFINQQPTGRFPHGKLSTDFAADTRRFKTHAPGYLSPYATGKNHHYRSQLSFSRGSGYDG 389
            PAI  FGDS   V NN+ + T+    +PPYG DF    PTGRF +GKL+TDF A+   FK++   YLS  A GKN    +  + +    YDG
Sbjct:   19 PAIFIFGDSVVDVGNNNDIYTIVKANFPPYGRDFTTHTPTGRFCNGKLATDFTAENLGFKSYPQAYLSKKAKGKNLLIGANFASAASGYYDG 110          
BLAST of EY667918 vs. ExPASy Swiss-Prot
Match: GDL86_ARATH (GDSL esterase/lipase At5g45960 OS=Arabidopsis thaliana GN=At5g45960 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.205e-14
Identity = 42/90 (46.67%), Postives = 52/90 (57.78%), Query Frame = 3
Query:  117 AIITFGDSARHVANNHYLATLFLDTYPPYGMDFINQQPTGRFPHGKLSTDFAADTRRFKTHAPGYLSPYATGKNHHYRSQLSFSRGSGYD 386
            AI+ FGDS     NN+Y+ T+F   +PPYG+DF N+ PTGRF +G+L TDF A     K + P YL P   G N         S GSGYD
Sbjct:   47 AILVFGDSTVDPGNNNYIDTVFKCNFPPYGLDFRNKTPTGRFCNGRLVTDFIASYIGVKENVPPYLDP-NLGINELISGVSFASAGSGYD 135          
BLAST of EY667918 vs. ExPASy Swiss-Prot
Match: GDL59_ARATH (GDSL esterase/lipase At3g53100 OS=Arabidopsis thaliana GN=At3g53100 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.678e-13
Identity = 37/95 (38.95%), Postives = 57/95 (60.00%), Query Frame = 3
Query:  114 PAIITFGDSARHVANNHYLATLFLDTYPPYGMDFINQQPTGRFPHGKLSTDFAADTRRFKTHAPGYLSPYATGKNHHYRSQLSFSRGSGYDGQDI 398
            PA+I FGDS   V NN+ L ++    + PYG DFI+Q+PTGRF +GKL+ DF+A+   F ++ P +LS  A+ +N    +  + +    YD   +
Sbjct:   28 PALIMFGDSIVDVGNNNNLLSIVKSNFLPYGRDFIDQRPTGRFCNGKLAVDFSAEYLGFSSYPPAFLSREASNENILIGANFASASSGYYDATSV 122          
BLAST of EY667918 vs. ExPASy Swiss-Prot
Match: GDL4_ARATH (GDSL esterase/lipase At1g20120 OS=Arabidopsis thaliana GN=At1g20120 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.018e-12
Identity = 42/93 (45.16%), Postives = 55/93 (59.14%), Query Frame = 3
Query:  111 YPAIITFGDSARHVANNHYLATLFLDTYPPYGMDFINQQPTGRFPHGKLSTDFAADTRRFKTHAPGYLSPYATGKNHHYRSQLSF-SRGSGYD 386
            +PAI  FGDS     NN Y+ TL    + PYGM+F ++ PTGRF +GK+ +DF AD    K   P YL P  T ++    + +SF S GSGYD
Sbjct:   76 FPAIFAFGDSILDTGNNDYILTLIKANFLPYGMNFPDKVPTGRFCNGKIPSDFIADYIGVKPVVPAYLRPGLTQED--LLTGVSFASGGSGYD 166          
BLAST of EY667918 vs. ExPASy Swiss-Prot
Match: GDL73_ARATH (GDSL esterase/lipase At5g03820 OS=Arabidopsis thaliana GN=At5g03820 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.329e-12
Identity = 41/92 (44.57%), Postives = 54/92 (58.70%), Query Frame = 3
Query:  114 PAIITFGDSARHVANNHYLATLFLDTYPPYGMDFINQQPTGRFPHGKLSTDFAADTRRFKTHAPGYLSPYATGKNHHYRSQLSFSRG-SGYD 386
            PA+I  GDS     NN+ L TL    +PPYG DF+    TGRF +GKL+TDF A++  F ++   YLS  A G N    +  +F+ G SGYD
Sbjct:   29 PALIIMGDSVVDAGNNNRLNTLIKANFPPYGRDFLAHNATGRFSNGKLATDFTAESLGFTSYPVPYLSQEANGTN--LLTGANFASGASGYD 118          
BLAST of EY667918 vs. ExPASy Swiss-Prot
Match: GDL34_ARATH (GDSL esterase/lipase At2g04570 OS=Arabidopsis thaliana GN=At2g04570 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.267e-12
Identity = 35/79 (44.30%), Postives = 48/79 (60.76%), Query Frame = 3
Query:  114 PAIITFGDSARHVANNHYLATLFLDTYPPYGMDFINQQPTGRFPHGKLSTDFAADTRRFKTHAPGYLSP------YATG 332
            PAII FGDS+    NN+Y+ T+    + PYG DF+  +PTGRF +GK++TDF ++    K   P YL P      +ATG
Sbjct:   27 PAIIVFGDSSVDAGNNNYIPTVARSNFEPYGRDFVGGKPTGRFCNGKIATDFMSEALGLKPIIPAYLDPSYNISDFATG 105          
BLAST of EY667918 vs. ExPASy Swiss-Prot
Match: GDL72_ARATH (GDSL esterase/lipase At5g03810 OS=Arabidopsis thaliana GN=At5g03810 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.274e-11
Identity = 38/92 (41.30%), Postives = 52/92 (56.52%), Query Frame = 3
Query:  114 PAIITFGDSARHVANNHYLATLFLDTYPPYGMDFINQQPTGRFPHGKLSTDFAADTRRFKTHAPGYLSPYATGKNHHYRSQLSFSRG-SGYD 386
            PA+I  GDS     NN++  TL    +PPYG DF+    TGRF +GKL+TDF A+   F ++   YLS  A   N    +  +F+ G SG+D
Sbjct:   29 PALIIMGDSVVDAGNNNHRITLVKANFPPYGRDFVAHSATGRFSNGKLATDFTAENLGFTSYPVAYLSQEANETN--LLTGANFASGASGFD 118          
BLAST of EY667918 vs. ExPASy Swiss-Prot
Match: GDL89_ARATH (GDSL esterase/lipase At5g63170 OS=Arabidopsis thaliana GN=At5g63170 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.276e-11
Identity = 38/92 (41.30%), Postives = 53/92 (57.61%), Query Frame = 3
Query:  114 PAIITFGDSARHVANNHYLATLFLDTYPPYGMDFINQQPTGRFPHGKLSTDFAADTRRFKTHAPGYLSPYATGKNHHYRSQLSF-SRGSGYD 386
            PA+I FGDS     NN+YL TL    + PYG DF+ ++ TGRF +G++ TD  A+    K   P Y SP+   + +   + +SF S GSG D
Sbjct:   27 PAVIAFGDSILDTGNNNYLMTLTKVNFYPYGRDFVTRRATGRFGNGRIPTDLIAEGLGIKNIVPAYRSPFL--EPNDILTGVSFASGGSGLD 116          
BLAST of EY667918 vs. ExPASy Swiss-Prot
Match: GDL1_ARATH (GDSL esterase/lipase At1g06990 OS=Arabidopsis thaliana GN=At1g06990 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 4.276e-11
Identity = 36/92 (39.13%), Postives = 47/92 (51.09%), Query Frame = 3
Query:  111 YPAIITFGDSARHVANNHYLATLFLDTYPPYGMDFINQQPTGRFPHGKLSTDFAADTRRFKTHAPGYLSPYATGKNHHYRSQLSFSRGSGYD 386
            +PAI+ FGDS     NN+Y+ T     +PPYG +F     TGRF +GKL  DF A     K   P +L P+ +  +         S GSGYD
Sbjct:   35 FPAILVFGDSTIDTGNNNYIKTYIRANFPPYGCNFPGHNATGRFSNGKLIPDFIASLMGIKDTVPPFLDPHLSDSD-IITGVCFASAGSGYD 125          
The following BLAST results are available for this feature:
BLAST of EY667918 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
APG2_ARATH2.954e-2053.61GDSL esterase/lipase APG OS=Arabidopsis thaliana G... [more]
GDL78_ARATH6.375e-1544.57GDSL esterase/lipase At5g22810 OS=Arabidopsis thal... [more]
GDL86_ARATH9.205e-1446.67GDSL esterase/lipase At5g45960 OS=Arabidopsis thal... [more]
GDL59_ARATH2.678e-1338.95GDSL esterase/lipase At3g53100 OS=Arabidopsis thal... [more]
GDL4_ARATH1.018e-1245.16GDSL esterase/lipase At1g20120 OS=Arabidopsis thal... [more]
GDL73_ARATH1.329e-1244.57GDSL esterase/lipase At5g03820 OS=Arabidopsis thal... [more]
GDL34_ARATH2.267e-1244.30GDSL esterase/lipase At2g04570 OS=Arabidopsis thal... [more]
GDL72_ARATH3.274e-1141.30GDSL esterase/lipase At5g03810 OS=Arabidopsis thal... [more]
GDL89_ARATH4.276e-1141.30GDSL esterase/lipase At5g63170 OS=Arabidopsis thal... [more]
GDL1_ARATH4.276e-1139.13GDSL esterase/lipase At1g06990 OS=Arabidopsis thal... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-102-044-A12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY667918 ID=EY667918; Name=EY667918; organism=Citrus sinensis; type=EST; length=889bp
CCCGCGTCCGGAGGAGGTATATCTCTTGCGGGAAACACCTCTGTTTGTGG
CGCTTGCATTTGCTCTTGCACTTGCTATCCAAAGGCATGCACAAGATGCA
CCACCACTTGTATCCTGCAATCATAACATTCGGCGATTCTGCTCGTCATG
TTGCAAACAACCACTATCTTGCCACCCTTTTCCTAGATACTTACCCTCCC
TATGGAATGGACTTTATCAATCAACAACCTACTGGAAGATTTCCCCATGG
AAAATTATCCACTGACTTCGCTGCTGATACCCGACGCTTCAAGACTCATG
CGCCAGGATATCTCAGCCCATACGCTACAGGGAAGAACCACCATTATCGG
AGCCAACTTTCCTTCAGTCGTGGATCTGGTTATGATGGACAGGACATCCT
ACTTAAATCATGCGATTCCAATGAAGCAGCAGGTGCACCACAATAAGAGA
CTACCACAACTCAGGCTCCAATGCGTAGCACGGAAGCTACACAATACAGC
TTCTATAAGTCAAGGGCACGCCATATACAATACTGCGCGCCCGTGCGGCA
GTGGGCGACTCTTCCTGCCGCAAATTAACTTATGATAGAATCCACTTATA
CATTTAGCAAAAGCCGTAAGCGCTCACTGGAAGGCAGATCAAAAGGGTCT
CAATGCGCTTGGTCGGGGTAATGTTATGGCGTCGCAGGTTTTCCATAAAC
AGAACTCACTTGCCATAGGTATATGGGGTGAGCACAACGACACACTCCTC
GGAGAGAGAACTTCTCCACCTGCCGCCATCGTTATAGAGGGTGGCGAGAT
TTCGGATATCAAGCGTAGNCAACTCCNCACCTGTGCGAACTACCGACCCA
CACTACCCCCGCCCCCAGTCCCCGTACAACACTCACAAC
back to top