EY680245

Overview
NameEY680245
Unique NameEY680245
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY680245 vs. ExPASy Swiss-Prot
Match: ACBP2_ARATH (Acyl-CoA-binding domain-containing protein 2 OS=Arabidopsis thaliana GN=ACBP2 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.948e-16
Identity = 42/66 (63.64%), Postives = 51/66 (77.27%), Query Frame = 1 
Query:   10 RLGAMPPEEAMQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMGPVFSSFAYEEESGNDL 207
            +LGAMPPEEAM+KYI+IVT+LYPTW  G      RG +DAAS +S+  MGPVFSS  Y+EES N+L
Sbjct:  168 KLGAMPPEEAMEKYIEIVTQLYPTWLDGGVKAGSRGGDDAAS-NSRGTMGPVFSSLVYDEESENEL 232
[Close]
BLAST of EY680245 vs. ExPASy Swiss-Prot
Match: ACBP1_ARATH (Acyl-CoA-binding domain-containing protein 1 OS=Arabidopsis thaliana GN=ACBP1 PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 4.799e-15
Identity = 40/66 (60.61%), Postives = 46/66 (69.70%), Query Frame = 1 
Query:   10 RLGAMPPEEAMQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMGPVFSSFAYEEESGNDL 207
            +LGAMPPEEAM+KYID+VT+LYP W  G S +  R  E A       PMGPVFSS  YEEES N+L
Sbjct:  158 KLGAMPPEEAMEKYIDLVTQLYPAWVEGGSKRRNRSGEAA------GPMGPVFSSLVYEEESDNEL 217
The following BLAST results are available for this feature:
BLAST of EY680245 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ACBP2_ARATH1.948e-1663.64Acyl-CoA-binding domain-containing protein 2 OS=Ar... [more]
ACBP1_ARATH4.799e-1560.61Acyl-CoA-binding domain-containing protein 1 OS=Ar... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-009-A03-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680245 ID=EY680245; Name=EY680245; organism=Citrus sinensis; type=EST; length=876bp
CCACGCGTCCGATTGGGTGCCATGCCTCCAGAAGAAGCAATGCAGAAATA
CATTGATATTGTTACAGAGCTGTATCCTACTTGGGCTGCTGGTTCATCTT
TGAAGAGCAAACGTGGACAAGAAGATGCGGCAAGCACAGATTCCAAAGCA
CCAATGGGTCCTGTTTTCAGCTCTTTTGCGTATGAGGAGGAATCTGGAAA
TGATTTGTAAGGTTTTAATGTTAAATTCAACATTATTTTTTTCGAGAGAG
TATTTATACGGTCCTTTCTAGTTTCACTCTGGGCCTGCTTCTTTTTTCCG
TAGGATTTCTGGTGGTGTTGGAATTGAAAGTCTTATCTCAACTGCAATTT
TATAACTTTTCTTTTCTGCAGTTTTATGAAATTCGATGTCTCCTTCCCTC
CTTTTTATGCTTGAATTGAATGATGAGCTGCCCATTCTTATTAAATTGAA
GTGAAATTGCTAGATATTTGACTTAATTACTAAAGTACATGGTGACATAG
ATTTGGATTGGTCATGTCCTTTCTATGGACATAATATCTGGAGCAATATG
TATGTTGTGAGTATCTGCATGAAAATTAAAAAATTGCTCTTTTCCTTTTT
TTTTTTTTTTAATTCCCTGAGGAGTTCAATTAAACTTGCCATTTTGCTTT
TAATTTCCTTTCTGAAACTTATGGCCATCGGGGTTTTTTATTTGGTTCCA
AATGCCCCAATTATCTTCTTCCCCATAATTCAATGCAAGCCCCCAATTGG
GGCCCTTTTCATTTTTTTATTAAACCCTTTAATTTGTTTTTTTCGGTTAA
AAGGCGAGGGTTCTTTGGTAAAAAAAATTTTTTCATGGGGTCAATCCTTT
GGAACCCACCTTTTTTTTTTCCCCCG
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