EY720280

Overview
NameEY720280
Unique NameEY720280
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length810
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11171 contig Csv1_Contig11171:1..810. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY720280 vs. ExPASy Swiss-Prot
Match: CNGC1_ARATH (Cyclic nucleotide-gated ion channel 1 OS=Arabidopsis thaliana GN=CNGC1 PE=1 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 8.154e-43
Identity = 96/220 (43.64%), Postives = 130/220 (59.09%), Query Frame = 3
Query:   24 KSELCLEVLKKVPMFQMMGKSILSEMCKCLKPVLYVQECCIVKEGDPICEMFFIXXXXXXXXXXXXXXXXSVFKKYLSTGDFWGEELATSALDPDPLSNIPHSNCALISVTNVEAFAINTDDLRAIVYQYWQHRNHNMQPLDIFKFYSQEWRTSKACVIQAAWCRYKKRKLEGSLYAKENILQDQKA-EAGGKPSKFGTAIYATQFFTYVRRSCKRNGGL 680
            K  LCL +L +VPMF+ M + +L  +C  L+PVLY +E  IV+EGDP+ EM FI                 +  +YL  GDF GEEL T ALDP   SN+P S   + ++  VEAFA+  DDL+ +  Q+   R H+ Q    F++YSQ+W+T  AC IQAAW RY K+KLE SL  +EN LQD  A EA G     G  IYA++F   + R+ +R+G +
Sbjct:  473 KRHLCLALLMRVPMFEKMDEQLLDALCDRLQPVLYTEESYIVREGDPVDEMLFIMRGKLLTITTNGGRTGFLNSEYLGAGDFCGEELLTWALDPHSSSNLPISTRTVRALMEVEAFALKADDLKFVASQF--RRLHSKQLRHTFRYYSQQWKTWAACFIQAAWRRYIKKKLEESLKEEENRLQDALAKEACGSSPSLGATIYASRFAANILRTIRRSGSV 690          
BLAST of EY720280 vs. ExPASy Swiss-Prot
Match: CNGC6_ARATH (Probable cyclic nucleotide-gated ion channel 6 OS=Arabidopsis thaliana GN=CNGC6 PE=1 SV=2)

HSP 1 Score: 142.895 bits (359), Expect = 2.013e-33
Identity = 82/218 (37.61%), Postives = 118/218 (54.13%), Query Frame = 3
Query:   24 KSELCLEVLKKVPMFQMMGKSILSEMCKCLKPVLYVQECCIVKEGDPICEMFFIXXXXXXXXXXXXXXXXSVFKKYLSTGDFWGEELATSALDPDPLSNIPHSNCALISVTNVEAFAINTDDLRAIVYQYWQHRNHNMQPLDIFKFYSQEWRTSKACVIQAAWCRYKKRKLEGSLYAKENILQDQKAE--AGGKPSKFGTAIYATQFFTYVRRSCKRN 671
            K  LCL ++++VP+F+ M + +L  +C+ LKP L+ ++  +V+EGDP+ EM FI                   +  L  GDF G+EL T ALDP   SN+P S   + ++T VEAFA+  D+L+ +  Q+   R H+ Q    F+FYSQ+WRT  AC +QAAW RY KRK    L  +E   +   A   AGG P        A++F     RS  +N
Sbjct:  501 KRHLCLALVRRVPLFENMDERLLDAICERLKPCLFTEKSYLVREGDPVNEMLFIIRGRLESVTTDGGRSGFYNRSLLKEGDFCGDELLTWALDPKSGSNLPSSTRTVKALTEVEAFALIADELKFVASQF--RRLHSRQVQHTFRFYSQQWRTWAACFMQAAWRRYIKRKKLEQLRKEEEEEEAAAASVIAGGSPYSIRATFLASKFAANALRSVHKN 716          
BLAST of EY720280 vs. ExPASy Swiss-Prot
Match: CNG13_ARATH (Putative cyclic nucleotide-gated ion channel 13 OS=Arabidopsis thaliana GN=CNGC13 PE=2 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 2.226e-32
Identity = 82/220 (37.27%), Postives = 119/220 (54.09%), Query Frame = 3
Query:   24 KSELCLEVLKKVPMFQMMGKSILSEMCKCLKPVLYVQECCIVKEGDPICEMFFIXXXXXXXXXXXXXXXXSVFKKYLSTGDFWGEELATSALDPDPLSNIPHSNCALISVTNVEAFAINTDDLRAIVYQYWQHRNHNMQPLDIFKFYSQEWRTSKACVIQAAWCRYKKRKLEGSLYAKE----NILQDQKAEAGGKPSKFGTAIYATQFFTYVRRSCKRN 671
            K   CL++LKKVP+F++M + +L  +C  LKPVLY +    ++EGDP+ EM F+                     YL   DF GE+L T ALDP   S+ P S   + ++T VEAFA+  DDL+ +  Q+   R H+ Q    F+FYS +WRT  A  IQAAW R+ +RKL  SL  +E    N +  ++  A    S   T +YA++F +   R+ + N
Sbjct:  461 KRHFCLDLLKKVPLFEIMDEQLLDAVCDKLKPVLYTENSYAIREGDPVEEMLFVMRGKLMSATTNGGRTGFFNAVYLKPSDFCGEDLLTWALDPQSSSHFPISTRTVQALTEVEAFALAADDLKLVASQF--RRLHSKQLQHTFRFYSVQWRTWGASFIQAAWRRHCRRKLARSLTEEEDRFRNAITKRERNAASSSSLVAT-LYASRFASNALRNLRTN 677          
BLAST of EY720280 vs. ExPASy Swiss-Prot
Match: CNG10_ARATH (Probable cyclic nucleotide-gated ion channel 10 OS=Arabidopsis thaliana GN=CNGC10 PE=2 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 6.476e-32
Identity = 81/224 (36.16%), Postives = 121/224 (54.02%), Query Frame = 3
Query:   24 KSELCLEVLKKVPMFQMMGKSILSEMCKCLKPVLYVQECCIVKEGDPICEMFFIXXXXXXXXXXXXXXXXSVFKKYLSTGDFWGEELATSALDPDPLSNIPHSNCALISVTNVEAFAINTDDLRAIVYQYWQHRNHNMQPLDIFKFYSQEWRTSKACVIQAAWCRYKKRKLEGSLYAKENIL------QDQKAEAGGKPS--KFGTAIYATQFFTYVRRSCKRN 671
            K  LCL++LKKVP+F++M + +L  +C  L+PVLY +   +++EGDP+ EM F+                      L   DF GE+L   ALDP   S+ P S   + ++T VEAFA+  +DL+++  Q+   R H+ Q    F+FYS +WRT     IQAAW RY +RKL  SL  +E+ L      QD++  A    S    G A+YA++F +    + + N
Sbjct:  460 KRHLCLDLLKKVPLFEIMDEQLLDAVCDRLRPVLYTENSYVIREGDPVGEMLFVMRGRLVSATTNGGRSGFFNAVNLKASDFCGEDLLPWALDPQSSSHFPISTRTVQALTEVEAFALTAEDLKSVASQF--RRLHSKQLQHTFRFYSVQWRTWSVSFIQAAWRRYCRRKLAKSLRDEEDRLREALASQDKEHNAATVSSSLSLGGALYASRFASNALHNLRHN 681          
BLAST of EY720280 vs. ExPASy Swiss-Prot
Match: CNGC3_ARATH (Probable cyclic nucleotide-gated ion channel 3 OS=Arabidopsis thaliana GN=CNGC3 PE=2 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 8.458e-32
Identity = 85/225 (37.78%), Postives = 122/225 (54.22%), Query Frame = 3
Query:   24 KSELCLEVLKKVPMFQMMGKSILSEMCKCLKPVLYVQECCIVKEGDPICEMFFIXXXXXXXXXXXXXXXXSVFKKYLSTGDFWGEELATSALDPDPLSNIPHSNCALISVTNVEAFAINTDDLRAIVYQYWQHRNHNMQPLDIFKFYSQEWRTSKACVIQAAWCRYKKRKLEGSLYAKENILQD--QKAEAGGKPSKFGTAIYATQFFTYVRRSCKRNGGLPGGR 692
            K  LCL++LKKVP FQ M   +L  +C  LK VLY ++  IV+EG+P+ +M FI                      L  GDF G +L T ALDP   S  P S+  + ++T VE F ++ DDL+ +  QY   R H+ Q   +F+FYS +W+T  AC IQAAW R+ +RKL  +L  +E  L +  Q  ++GG     G AIYA++F ++  R+ + N      R
Sbjct:  464 KRHLCLKLLKKVPWFQAMDDRLLDALCARLKTVLYTEKSYIVREGEPVEDMLFIMRGNLISTTTYGGRTGFFNSVDLVAGDFCG-DLLTWALDP-LSSQFPISSRTVQALTEVEGFLLSADDLKFVATQY--RRLHSKQLRHMFRFYSVQWQTWAACFIQAAWKRHCRRKLSKALREEEGKLHNTLQNDDSGGNKLNLGAAIYASRFASHALRNLRANAAARNSR 684          
BLAST of EY720280 vs. ExPASy Swiss-Prot
Match: CNGC9_ARATH (Putative cyclic nucleotide-gated ion channel 9 OS=Arabidopsis thaliana GN=CNGC9 PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.443e-31
Identity = 81/217 (37.33%), Postives = 115/217 (53.00%), Query Frame = 3
Query:   24 KSELCLEVLKKVPMFQMMGKSILSEMCKCLKPVLYVQECCIVKEGDPICEMFFIXXXXXXXXXXXXXXXXSVFKKYLSTGDFWGEELATSALDPDPLSNIPHSNCALISVTNVEAFAINTDDLRAIVYQYWQHRNHNMQPLDIFKFYSQEWRTSKACVIQAAWCRY-KKRKLEGSLYAKENILQDQKAEAGGKPSKFGTAIYATQFFTYVRRSCKRN 671
            K  LCL ++++VP+F+ M + +L  +C+ LKP LY +   +V+EGDP+ EM FI                   +  L  GDF GEEL T ALDP   SN+P S     ++T VEAFA+  D+L+ +  Q+   R H+ Q    F+FYSQ+WRT  A  IQAAW RY KK+KLE         L+ ++ E  G  +       A++F     R   +N
Sbjct:  500 KRHLCLALVRRVPLFENMDERLLDAICERLKPCLYTESSYLVREGDPVNEMLFIIRGRLESVTTDGGRSGFFNRSLLKEGDFCGEELLTWALDPKSGSNLPSSTRTAKALTEVEAFALIADELKFVASQF--RRLHSRQVQHTFRFYSQQWRTWAAIFIQAAWRRYVKKKKLEQ--------LRKEEEEGEGSVTSIRATFLASKFAANALRKVHKN 706          
BLAST of EY720280 vs. ExPASy Swiss-Prot
Match: CNGC5_ARATH (Probable cyclic nucleotide-gated ion channel 5 OS=Arabidopsis thaliana GN=CNGC5 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.884e-31
Identity = 79/216 (36.57%), Postives = 112/216 (51.85%), Query Frame = 3
Query:   24 KSELCLEVLKKVPMFQMMGKSILSEMCKCLKPVLYVQECCIVKEGDPICEMFFIXXXXXXXXXXXXXXXXSVFKKYLSTGDFWGEELATSALDPDPLSNIPHSNCALISVTNVEAFAINTDDLRAIVYQYWQHRNHNMQPLDIFKFYSQEWRTSKACVIQAAWCRYKKRKLEGSLYAKENILQDQKAEAGGKPSKFGTAIYATQFFTYVRRSCKRN 671
            K  LCL ++++VP+F+ M   +L  +C  LKP L+ +   +V+EGDP+ EM FI                   +  L  G+F GEEL T ALDP    N+P S   + ++T VEAFA+ +++L+ +  Q+   R H+ Q    F+FYS +WRT  AC IQAAW RY KRK      A+   +    A   G     G A  AT+F     R+  RN
Sbjct:  485 KRHLCLALVRRVPLFKSMDDKLLDAICMRLKPCLFTESTYLVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRSLLKEGEFCGEELLTWALDPKSGVNLPSSTRTVKALTEVEAFALTSEELKFVASQF--RRLHSRQVQHTFRFYSHQWRTWAACFIQAAWRRYCKRKKMEEAEAEAAAVSSSTA---GPSYSIGAAFLATKFAANALRTIHRN 695          
BLAST of EY720280 vs. ExPASy Swiss-Prot
Match: CNGC8_ARATH (Putative cyclic nucleotide-gated ion channel 8 OS=Arabidopsis thaliana GN=CNGC8 PE=2 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 5.482e-31
Identity = 71/171 (41.52%), Postives = 100/171 (58.48%), Query Frame = 3
Query:   24 KSELCLEVLKKVPMFQMMGKSILSEMCKCLKPVLYVQECCIVKEGDPICEMFFIXXXXXXXXXXXXXXXXSVFKKYLSTGDFWGEELATSALDPDPLSNIPHSNCALISVTNVEAFAINTDDLRAIVYQYWQHRNHNMQPLDIFKFYSQEWRTSKACVIQAAWCRYKKRKL 536
            K  LCL ++++VP+F  M + +L  +C+ LKP LY +   IV+EGDP+ EM FI                   +  L  GDF GEEL T ALDP   SN+P S   + ++T VEAFA+  ++L+ +  Q+   R H+ Q    F+FYSQ+WRT  AC IQAAW R+ +RK+
Sbjct:  495 KRHLCLNLVRRVPLFANMDERLLDAICERLKPSLYTESTYIVREGDPVNEMLFIIRGRLESVTTDGGRSGFFNRGLLKEGDFCGEELLTWALDPKAGSNLPSSTRTVKALTEVEAFALEAEELKFVASQF--RRLHSRQVQQTFRFYSQQWRTWAACFIQAAWRRHLRRKI 663          
BLAST of EY720280 vs. ExPASy Swiss-Prot
Match: CNGC7_ARATH (Putative cyclic nucleotide-gated ion channel 7 OS=Arabidopsis thaliana GN=CNGC7 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 9.351e-31
Identity = 70/170 (41.18%), Postives = 99/170 (58.24%), Query Frame = 3
Query:   24 KSELCLEVLKKVPMFQMMGKSILSEMCKCLKPVLYVQECCIVKEGDPICEMFFIXXXXXXXXXXXXXXXXSVFKKYLSTGDFWGEELATSALDPDPLSNIPHSNCALISVTNVEAFAINTDDLRAIVYQYWQHRNHNMQPLDIFKFYSQEWRTSKACVIQAAWCRYKKRK 533
            K  LCL ++++VP+F  M + +L  +C+ LKP L+ +   IV+EGDP+ EM FI                   +  L  GDF GEEL T ALDP   SN+P S   + ++T VEAFA+  ++L+ +  Q+   R H+ Q    F+FYSQ+WRT  +C IQAAW RY +RK
Sbjct:  489 KRHLCLNLVRRVPLFANMDERLLDAICERLKPSLFTESTYIVREGDPVNEMMFIIRGRLESVTTDGGRSGFFNRGLLKEGDFCGEELLTWALDPKAGSNLPSSTRTVKALTEVEAFALEAEELKFVASQF--RRLHSRQVQQTFRFYSQQWRTWASCFIQAAWRRYSRRK 656          
BLAST of EY720280 vs. ExPASy Swiss-Prot
Match: CNG15_ARATH (Putative cyclic nucleotide-gated ion channel 15 OS=Arabidopsis thaliana GN=CNGC15 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.034e-29
Identity = 70/179 (39.11%), Postives = 100/179 (55.87%), Query Frame = 3
Query:   24 KSELCLEVLKKVPMFQMMGKSILSEMCKCLKPVLYVQECCIVKEGDPICEMFFIXXXXXXXXXXXXXXXXSVFKKYLSTGDFWGEELATSALDPDPLSNIPHSNCALISVTNVEAFAINTDDLRAIVYQYWQHRNHNMQPLDIFKFYSQEWRTSKACVIQAAWCRYKKRKLEGSLYAKE 560
            K  LC +++++VP+F  M + +L  +C+ LKP L  +   +V+EGDP+ EM FI                      +  GDF GEEL T ALDP P+  +P S   + ++  VEAFA+  +DL+ +  Q+   R H  Q    F+FYS +WRT  AC IQAAW R++KRK +  L AKE
Sbjct:  458 KRHLCFDLVRRVPLFDQMDERMLDAICERLKPALCTEGTFLVREGDPVNEMLFIIRGHLDSYTTNGGRTGFFNSCLIGPGDFCGEELLTWALDPRPVVILPSSTRTVKAICEVEAFALKAEDLQFVASQF--RRLHTKQLRHKFRFYSHQWRTWAACFIQAAWRRHRKRKYKTELRAKE 634          
The following BLAST results are available for this feature:
BLAST of EY720280 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
CNGC1_ARATH8.154e-4343.64Cyclic nucleotide-gated ion channel 1 OS=Arabidops... [more]
CNGC6_ARATH2.013e-3337.61Probable cyclic nucleotide-gated ion channel 6 OS=... [more]
CNG13_ARATH2.226e-3237.27Putative cyclic nucleotide-gated ion channel 13 OS... [more]
CNG10_ARATH6.476e-3236.16Probable cyclic nucleotide-gated ion channel 10 OS... [more]
CNGC3_ARATH8.458e-3237.78Probable cyclic nucleotide-gated ion channel 3 OS=... [more]
CNGC9_ARATH1.443e-3137.33Putative cyclic nucleotide-gated ion channel 9 OS=... [more]
CNGC5_ARATH1.884e-3136.57Probable cyclic nucleotide-gated ion channel 5 OS=... [more]
CNGC8_ARATH5.482e-3141.52Putative cyclic nucleotide-gated ion channel 8 OS=... [more]
CNGC7_ARATH9.351e-3141.18Putative cyclic nucleotide-gated ion channel 7 OS=... [more]
CNG15_ARATH1.034e-2939.11Putative cyclic nucleotide-gated ion channel 15 OS... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-004-D04-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720280 ID=EY720280; Name=EY720280; organism=Citrus sinensis; type=EST; length=810bp
CACGCGTCCGCGGACGCGTGGGGAAAAGTGAACTTTGCTTAGAAGTGCTC
AAGAAGGTGCCAATGTTCCAAATGATGGGGAAATCAATTTTGAGTGAAAT
GTGCAAATGTCTTAAGCCAGTGCTTTATGTACAAGAATGCTGCATTGTCA
AGGAAGGTGATCCAATTTGTGAGATGTTCTTCATCACACAAGGCACGCTA
TTGACCACGACCACTAATGGCGGTAGAAATACAAGTGTCTTTAAGAAATA
TCTTAGTACTGGTGACTTTTGGGGTGAAGAGCTTGCTACTTCAGCTTTAG
ATCCCGATCCACTCTCAAACATTCCTCACTCAAATTGTGCTCTTATTAGC
GTTACAAATGTTGAAGCCTTTGCCATAAATACTGATGACTTGAGGGCTAT
TGTTTATCAGTACTGGCAGCATCGCAATCACAACATGCAACCTCTAGACA
TTTTCAAGTTTTACTCCCAAGAGTGGAGGACTTCAAAAGCTTGCGTAATA
CAAGCAGCTTGGTGCCGCTATAAGAAAAGGAAGCTTGAAGGATCTCTTTA
CGCAAAGGAGAATATTTTGCAAGATCAAAAAGCCGAGGCTGGTGGAAAAC
CATCCAAGTTTGGCACTGCCATTTATGCCACACAATTTTTTACTTATGTG
CGTCGATCCTGTAAGCGCAATGGTGGTCTCCCCGGAGGACGTGTNCATAT
CACACTTGCTGCTTCAGAAACAACCAGATCTTAGGGTAATACTTGTAAAT
TAGATTATTTGAGTTGAAATTGCAAGGTTTGCTGAAAATAGGAACATCAC
TTCCATTGTA
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