EY741779

Overview
NameEY741779
Unique NameEY741779
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY741779 vs. ExPASy Swiss-Prot
Match: THI4_CITSI (Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis GN=THI1 PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 2.061e-60
Identity = 141/246 (57.32%), Postives = 157/246 (63.82%), Query Frame = 3
Query:  126 FAPSVSSTTNKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFXFDPHQESHCSREMTRRYMTDMITYADTDXXXXXXXXXXXXCAYELSKNPTFR-XXXXXXXXXRGVALAPWTIFSGMGVRKQPHL-PDELASTTMSRPLCCDQACRACHFPLW-----SKLLARPKVNSFIALPPKNL*SKAGKFVGLGTNGALGSMIHKNKSCLDPNVMEPKGVVTPFGHNGPLGPLELK 842
            FAPSVSSTTNKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTF FDP +ES  SREMTRRYMTDMITYADTD            CAYELSKNP  +           G A     +FS M VRK  H+  DEL      +    D      H  L+     SKLLARP V  F A+  ++L  K G+  G+ TN AL SM H  +SC+DPNVME K VV+  GH+GP G   +K
Sbjct:    9 FAPSVSSTTNKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQ----DNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVK 250          
BLAST of EY741779 vs. ExPASy Swiss-Prot
Match: THI4_ALNGL (Thiazole biosynthetic enzyme, chloroplastic OS=Alnus glutinosa GN=THI4 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 9.003e-40
Identity = 106/232 (45.69%), Postives = 132/232 (56.90%), Query Frame = 3
Query:  168 SSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFXFDPHQESHCSREMTRRYMTDMITYADTDXXXXXXXXXXXXCAYELSKNPTFR-XXXXXXXXXRGVALAPWTIFSGMGVRKQPHL-PDELASTTMSRPLCCDQACRACHFPLW-----SKLLARPKVNSFIALPPKNL*SKAGKFVGLGTNGALGSMIHKNKSCLDPNVMEPKGVVTPFGHNGPLGPLELK 842
            SSF+G P++PS +R+QP K+    ++S+S + SPPYDL  F FDP +ES  SREMTRRYM DMITYADTD            C YELSKNP+ +           G A     +FSGM VRK  HL  DEL      +    D      H  L+     SKLLARP V  F A+  ++L  K G+  G+ TN AL SM H  +SC+DPNVME K VV+  GH+GP G   +K
Sbjct:   20 SSFYGTPLAPSSIRVQPTKAGAKPSISMSGAPSPPYDLKAFTFDPIKESIVSREMTRRYMMDMITYADTDVVVVGAGSSGLVC-YELSKNPSVQVAIIEQSVSPGGGAWLGGQLFSGMVVRKPAHLFLDELGIEYDEQ----DNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVK 246          
BLAST of EY741779 vs. ExPASy Swiss-Prot
Match: THI4_ARATH (Thiazole biosynthetic enzyme, chloroplastic OS=Arabidopsis thaliana GN=THI1 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.805e-33
Identity = 98/240 (40.83%), Postives = 128/240 (53.33%), Query Frame = 3
Query:  135 SVSSTT-NKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFXFDPHQESHCSREMTRRYMTDMITYADTDXXXXXXXXXXXXCAYELSKNPTFR-XXXXXXXXXRGVALAPWTIFSGMGVRKQPHLPDELASTTMSRPLCCDQACRACHF--PLWSKLLARPKVNSFIALPPKNL*SKAGKFVGLGTNGALGSMIHKNKSCLDPNVMEPKGVVTPFGHNGPLGPLELK 842
            S+SST   +LFDSSFHG+ +S + + +      +P + S+ A+ +  YDLN F FDP +ES  SREMTRRYMTDMITYA+TD             AYE+SKNP  +           G A     +FS M VRK  HL  +                 A  F   + SKLLARP V  F A+  ++L  K  +  G+ TN AL +  H  +SC+DPNVME K VV+  GH+GP G   +K
Sbjct:    9 SLSSTKPQRLFDSSFHGSAISAAPISI----GLKPRSFSVRATTAG-YDLNAFTFDPIKESIVSREMTRRYMTDMITYAETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATGVK 243          
BLAST of EY741779 vs. ExPASy Swiss-Prot
Match: THI42_MAIZE (Thiazole biosynthetic enzyme 1-2, chloroplastic OS=Zea mays GN=THI1-2 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.429e-31
Identity = 99/246 (40.24%), Postives = 126/246 (51.22%), Query Frame = 3
Query:  141 SSTTNKLFDSSFHGAPMSPSLLRLQ---------PIKSSRPNNLSISASASPPYDLNTFXFDPHQESHCSREMTRRYMTDMITYADTDXXXXXXXXXXXXCAYELSKNPTFR-XXXXXXXXXRGVALAPWTIFSGMGVRKQPHL-PDEL-ASTTMSRPLCCDQACRACHFPLWSKLLARPKVNSFIALPPKNL*SKAGKFVGLGTNGALGSMIHKNKSCLDPNVMEPKGVVTPFGHNGPLGPLELK 842
            ++  + L  SSF G+ + PS  R           P     P   SIS S +PPYDL +F F P +ES  SREMTRRYMTDMIT+ADTD            CAYELSK+PT             G A     +FS M VR+  HL  DEL      +      +        + S+LLARP V  F A+  ++L  + G+  G+ TN AL SM H  +SC+DPNVME K VV+  GH+GP G   +K
Sbjct:    3 TTAASSLLKSSFAGSRL-PSATRTTTPSSVAVATPRAGGGPIRASIS-SPNPPYDLTSFRFSPIKESIVSREMTRRYMTDMITHADTDVVIVGAGSAGLSCAYELSKDPTVSVAIVEQSVSPGGGAWLGGQLFSAMVVRRPAHLFLDELGVGYDEAEDYVVVKHAALFTSTVMSRLLARPNVKLFNAVAVEDLIVRRGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVK 246          
BLAST of EY741779 vs. ExPASy Swiss-Prot
Match: THI41_MAIZE (Thiazole biosynthetic enzyme 1-1, chloroplastic OS=Zea mays GN=THI1-1 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.478e-31
Identity = 99/248 (39.92%), Postives = 127/248 (51.21%), Query Frame = 3
Query:  141 SSTTNKLFDSSFHGAPMSPSLLRLQPIK----------SSRPNNLSISASAS-PPYDLNTFXFDPHQESHCSREMTRRYMTDMITYADTDXXXXXXXXXXXXCAYELSKNPTFR-XXXXXXXXXRGVALAPWTIFSGMGVRKQPHL-PDEL-ASTTMSRPLCCDQACRACHFPLWSKLLARPKVNSFIALPPKNL*SKAGKFVGLGTNGALGSMIHKNKSCLDPNVMEPKGVVTPFGHNGPLGPLELK 842
            ++  + L  SSF G+ + P+  R  P             + P   S+S S+S PPYDL +F F P +ES  SREMTRRYMTDMITYADTD            CAYELSK+P              G A     +FS M VRK  HL  DEL  +   +      +        + S LLARP V  F A+  ++L  + G+  G+ TN AL SM H  +SC+DPNVME K VV+  GH+GP G   +K
Sbjct:    3 TAAASSLLKSSFAGSRL-PAATRTTPASLVVATGPRGAGAGPICASMSMSSSNPPYDLTSFRFSPIKESIVSREMTRRYMTDMITYADTDVVIVGAGSAGLSCAYELSKDPAVSIAIVEQSVSPGGGAWLGGQLFSAMVVRKPAHLFLDELGVAYDEAEDYVVIKHAALFTSTVMSLLLARPNVKLFNAVAVEDLIVRGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVK 249          
BLAST of EY741779 vs. ExPASy Swiss-Prot
Match: THI2_SCHPO (Thiazole biosynthetic enzyme, mitochondrial OS=Schizosaccharomyces pombe GN=thi2 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 6.723e-11
Identity = 65/210 (30.95%), Postives = 94/210 (44.76%), Query Frame = 3
Query:  255 ASASPPYDLN-TFXFDPHQESHCSREMTRRYMTDMITYADTDXXXXXXXXXXXXCAYEL-SKNPTFRXXXXXXXXXRGV-ALAPWTIFSGMGVRKQPHLPDELASTTMSRPLCCDQ----ACRACHFP--LWSKLLARPKVNSFIALPPKNL*SKAGK-----FVGLGTNGALGSMIHKNKSCLDPNVMEPKGVVTPFGHNGPLGPLELK 842
            + A P Y L+ +F F P +ES  SR MTRRY +D+  YA++D             AY + ++ P  +          G  A     +FS M VRK    P +L    +  P   +        A  F   + ++ LA P V  F A   ++L  K GK       G+ TN  L S+ H  +SC+DPN +    VV+  GH+GP G   +K
Sbjct:   37 SKAYPTYSLDESFSFAPIRESTVSRAMTRRYFSDLDKYAESDIVIVGAGSAGLTAAYYIGTRRPDLKIAIIEASVAPGGGAWLGGQLFSAMVVRK----PADLFLNEIGVPYEDEGDYVVVKHAALFTSTVMARTLALPNVKLFNATAVEDLIVKEGKDGKQRIAGVVTNWTLVSLNHGLQSCMDPNTINAHLVVSATGHDGPFGAFCVK 242          
The following BLAST results are available for this feature:
BLAST of EY741779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
THI4_CITSI2.061e-6057.32Thiazole biosynthetic enzyme, chloroplastic OS=Cit... [more]
THI4_ALNGL9.003e-4045.69Thiazole biosynthetic enzyme, chloroplastic OS=Aln... [more]
THI4_ARATH2.805e-3340.83Thiazole biosynthetic enzyme, chloroplastic OS=Ara... [more]
THI42_MAIZE3.429e-3140.24Thiazole biosynthetic enzyme 1-2, chloroplastic OS... [more]
THI41_MAIZE4.478e-3139.92Thiazole biosynthetic enzyme 1-1, chloroplastic OS... [more]
THI2_SCHPO6.723e-1130.95Thiazole biosynthetic enzyme, mitochondrial OS=Sch... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-705-089-C10-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY741779 ID=EY741779; Name=EY741779; organism=Citrus sinensis; type=EST; length=847bp
ACCACGCGTCCGCACCAGTCATCATCACTGCTGCAAATCAAATTACTTCT
CATTATCAAACTTCTAAGCAGCAGGGGAAGGAGGGGTAAAAAAAAAAAAC
CATGGCAGCCATGGCTTCTACAGCTTTCGCTCCTTCAGTTTCGTCCACCA
CCAATAAGCTCTTTGACTCATCCTTTCATGGGGCTCCCATGTCACCTTCT
CTTCTACGTCTTCAACCCATCAAATCTTCTCGTCCCAACAACTTGTCCAT
TTCTGCTTCTGCTTCTCCTCCTTATGACTTGAACACTTTCANGTTTGACC
CCCATCAAGAATCCCATTGTTCTCGTGAAATGACACGCAGGTACATGACG
GACATGATCACTTATGCTGACACTGATGTGGTANTGGGTGGTGCTGGCTC
TGCTGGGCTCTCTTGTGCTTATGAGCTCAGCAAAAACCCCACATTCAGAT
TGCTATTATCGAACAGTCTGTTANCCCGGGGCGTGGCCCTTGCTCCGTGG
ACAATCTTCTCTGGCATGGGTGTGCGCAAACAGCCACATCTTCCTGACGA
GCTGGCATCGACTACGATGAGCAGACCACTATGTTGTGATCAAGCATGCA
GGGCTTGTCACTTCCCTTTATGGAGCAAGCTCCTGGCCCGGCCCAAGGTT
AACTCCTTTATTGCATTGCCACCCAAGAACTTATAATCCAAAGCCGGCAA
ATTTGTGGGGTTGGGAACCAACGGGGCGTTGGGTTCCATGATTCACAAAA
ACAAGTCTTGCTTGGATCCAAATGTAATGGAACCAAAGGGGGTTGTAACC
CCTTTTGGCCATAATGGGCCTTTGGGGCCCCTGGAATTAAAAGGTTA
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