FC922020

Overview
NameFC922020
Unique NameFC922020
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length219
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5131 contig Csv1_Contig5131:154..372. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC922020 vs. ExPASy Swiss-Prot
Match: MDAR_SOLLC (Monodehydroascorbate reductase OS=Solanum lycopersicum GN=AFRR PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.384e-33
Identity = 69/72 (95.83%), Postives = 70/72 (97.22%), Query Frame = 2
Query:    2 VILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPE 217
            VI+GGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEG ARLPGFHVCVGSGGER LPE
Sbjct:    9 VIVGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGAARLPGFHVCVGSGGERQLPE 80          
BLAST of FC922020 vs. ExPASy Swiss-Prot
Match: MDAR_PEA (Monodehydroascorbate reductase OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 7.595e-32
Identity = 65/72 (90.28%), Postives = 67/72 (93.06%), Query Frame = 2
Query:    2 VILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPE 217
            +I+GGGVSAGYAAREF KQGV PGELAIISKEAVAPYERPALSKAYLFPE  ARLPGFH CVGSGGERLLPE
Sbjct:    8 IIIGGGVSAGYAAREFVKQGVHPGELAIISKEAVAPYERPALSKAYLFPESPARLPGFHTCVGSGGERLLPE 79          
BLAST of FC922020 vs. ExPASy Swiss-Prot
Match: MDARS_CUCSA (Monodehydroascorbate reductase, seedling isozyme OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 9.919e-32
Identity = 65/72 (90.28%), Postives = 68/72 (94.44%), Query Frame = 2
Query:    2 VILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPE 217
            VILGGGV+AGYAAREF KQG+ PGELAIISKEAVAPYERPALSKAYLFPE  ARLPGFHVCVGSGGERLLP+
Sbjct:    9 VILGGGVAAGYAAREFVKQGLNPGELAIISKEAVAPYERPALSKAYLFPESPARLPGFHVCVGSGGERLLPD 80          
BLAST of FC922020 vs. ExPASy Swiss-Prot
Match: MDAR3_ARATH (Probable monodehydroascorbate reductase, cytoplasmic isoform 3 OS=Arabidopsis thaliana GN=At3g52880 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.295e-31
Identity = 63/72 (87.50%), Postives = 68/72 (94.44%), Query Frame = 2
Query:    2 VILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPE 217
            +ILGGGVSAGYAA+EFA QGV+PGELA+ISKEAVAPYERPALSK YLFPEG ARLPGFH CVGSGGE+LLPE
Sbjct:    9 IILGGGVSAGYAAKEFANQGVQPGELAVISKEAVAPYERPALSKGYLFPEGAARLPGFHCCVGSGGEKLLPE 80          
BLAST of FC922020 vs. ExPASy Swiss-Prot
Match: MDAR2_ARATH (Probable monodehydroascorbate reductase, cytoplasmic isoform 2 OS=Arabidopsis thaliana GN=At3g27820 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 2.449e-22
Identity = 49/72 (68.06%), Postives = 57/72 (79.17%), Query Frame = 2
Query:    2 VILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPE 217
            VILGGGV+AGYAA EF ++GV  GEL IIS+E VAPYERPALSK +L PE  ARLP FH CVG+  E+L P+
Sbjct:    8 VILGGGVAAGYAALEFTRRGVSDGELCIISEEPVAPYERPALSKGFLLPEAPARLPSFHTCVGANDEKLTPK 79          
BLAST of FC922020 vs. ExPASy Swiss-Prot
Match: MDAR4_ARATH (Probable monodehydroascorbate reductase, cytoplasmic isoform 4 OS=Arabidopsis thaliana GN=At5g03630 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 7.125e-22
Identity = 50/72 (69.44%), Postives = 56/72 (77.78%), Query Frame = 2
Query:    2 VILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPE 217
            VI+GGGV+AGYAAREF  QGVKPGELAIIS+E V PYERPALSK Y+  E  A LP F+V  G GGER  P+
Sbjct:   10 VIVGGGVAAGYAAREFFNQGVKPGELAIISREQVPPYERPALSKGYIHLENKATLPNFYVAAGIGGERQFPQ 81          
BLAST of FC922020 vs. ExPASy Swiss-Prot
Match: MDARP_ARATH (Monodehydroascorbate reductase, chloroplastic OS=Arabidopsis thaliana GN=At1g63940 PE=2 SV=3)

HSP 1 Score: 99.3673 bits (246), Expect = 6.032e-21
Identity = 48/74 (64.86%), Postives = 57/74 (77.03%), Query Frame = 2
Query:    2 VILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFP--EGTARLPGFHVCVGSGGERLLPE 217
            VI+GGG +AGYAAR F + G+  G L I++KEA APYERPAL+KAYLFP  +  ARLPGFH CVG GGER  P+
Sbjct:   64 VIVGGGNAAGYAARTFVENGMADGRLCIVTKEAYAPYERPALTKAYLFPPEKKPARLPGFHTCVGGGGERQTPD 137          
BLAST of FC922020 vs. ExPASy Swiss-Prot
Match: MDAR1_ARATH (Probable monodehydroascorbate reductase, cytoplasmic isoform 1 OS=Arabidopsis thaliana GN=At3g09940 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 6.901e-17
Identity = 41/71 (57.75%), Postives = 51/71 (71.83%), Query Frame = 2
Query:    2 VILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLP 214
            VI+GGGV+ GYAAREF+ QG+KPGELAIISKE V P+ERP L+K Y+  E    L   +VC G+G  +  P
Sbjct:   10 VIIGGGVAGGYAAREFSNQGLKPGELAIISKEPVPPFERPELTKVYIDLEVNPTLANIYVCAGTGEAKQYP 80          
The following BLAST results are available for this feature:
BLAST of FC922020 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
MDAR_SOLLC1.384e-3395.83Monodehydroascorbate reductase OS=Solanum lycopers... [more]
MDAR_PEA7.595e-3290.28Monodehydroascorbate reductase OS=Pisum sativum PE... [more]
MDARS_CUCSA9.919e-3290.28Monodehydroascorbate reductase, seedling isozyme O... [more]
MDAR3_ARATH1.295e-3187.50Probable monodehydroascorbate reductase, cytoplasm... [more]
MDAR2_ARATH2.449e-2268.06Probable monodehydroascorbate reductase, cytoplasm... [more]
MDAR4_ARATH7.125e-2269.44Probable monodehydroascorbate reductase, cytoplasm... [more]
MDARP_ARATH6.032e-2164.86Monodehydroascorbate reductase, chloroplastic OS=A... [more]
MDAR1_ARATH6.901e-1757.75Probable monodehydroascorbate reductase, cytoplasm... [more]
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Properties
Property NameValue
Genbank descriptionC06056F07T7 RindPdigS Citrus sinensis cDNA clone C06056F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC922020 ID=FC922020; Name=FC922020; organism=Citrus sinensis; type=EST; length=219bp
CGTGATCCTCGGTGGCGGTGTCTCTGCTGGATATGCAGCTAGGGAGTTTG
CTAAGCAGGGTGTTAAGCCAGGCGAGCTGGCAATTATCTCCAAAGAAGCG
GTTGCTCCGTATGAGCGTCCAGCACTTAGCAAGGCATATCTTTTCCCTGA
GGGAACTGCTAGACTTCCCGGTTTCCATGTCTGTGTTGGAAGTGGTGGAG
AGAGACTGCTTCCTGAGTG
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