EY720851

Overview
NameEY720851
Unique NameEY720851
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720851 vs. ExPASy Swiss-Prot
Match: UXS1_DANRE (UDP-glucuronic acid decarboxylase 1 OS=Danio rerio GN=uxs1 PE=2 SV=2)

HSP 1 Score: 232.646 bits (592), Expect = 2.661e-65
Identity = 109/146 (74.66%), Postives = 122/146 (83.56%), Query Frame = 2
Query:  179 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGK 616
            RI++TGGAGFVGSHL D+L+  G  V VVDNFFTGRK NV H  G+ NFELI HDVVEPL +EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP  HPQ E YWG+VNPIG R+CYDEGK
Sbjct:   88 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQNEDYWGHVNPIGPRACYDEGK 233          

HSP 2 Score: 38.5058 bits (88), Expect = 2.661e-65
Identity = 21/59 (35.59%), Postives = 33/59 (55.93%), Query Frame = 1
Query:  661 GVEVRIAKMFNTYGPRMCIHEWRCGH*FGWSGLREGAFNGFGDGEAKWRCRFGADLGGG 837
            GVEVR+A++FNT+G RM +++ R    F    L+  A   +G G      ++ +DL  G
Sbjct:  248 GVEVRVARIFNTFGSRMHMNDGRVVSNFILQALQGEALTVYGSGSQTRAFQYVSDLVNG 306          
BLAST of EY720851 vs. ExPASy Swiss-Prot
Match: UXS1_RAT (UDP-glucuronic acid decarboxylase 1 OS=Rattus norvegicus GN=Uxs1 PE=1 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.445e-61
Identity = 121/205 (59.02%), Postives = 143/205 (69.76%), Query Frame = 2
Query:  179 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKANC*NVDHGLPQRSWAWRLGLLKCSTLMDPVCVFMNGGVVINLVGQA*GKEPLMGLGMG 793
            RI++TGGAGFVGSHL D+L+  G  V VVDNFFTGRK NV H  G+ NFELI HDVVEPL +EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP  HPQ E YWG+VNPIG R+CYDEGK     + +   ++     + + +      P     +G VV N + QA   EPL   G G
Sbjct:   90 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGV-EVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSG 293          
BLAST of EY720851 vs. ExPASy Swiss-Prot
Match: UXS1_PONAB (UDP-glucuronic acid decarboxylase 1 OS=Pongo abelii GN=UXS1 PE=2 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.445e-61
Identity = 121/205 (59.02%), Postives = 143/205 (69.76%), Query Frame = 2
Query:  179 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKANC*NVDHGLPQRSWAWRLGLLKCSTLMDPVCVFMNGGVVINLVGQA*GKEPLMGLGMG 793
            RI++TGGAGFVGSHL D+L+  G  V VVDNFFTGRK NV H  G+ NFELI HDVVEPL +EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP  HPQ E YWG+VNPIG R+CYDEGK     + +   ++     + + +      P     +G VV N + QA   EPL   G G
Sbjct:   90 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGV-EVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSG 293          
BLAST of EY720851 vs. ExPASy Swiss-Prot
Match: UXS1_MOUSE (UDP-glucuronic acid decarboxylase 1 OS=Mus musculus GN=Uxs1 PE=2 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.445e-61
Identity = 121/205 (59.02%), Postives = 143/205 (69.76%), Query Frame = 2
Query:  179 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKANC*NVDHGLPQRSWAWRLGLLKCSTLMDPVCVFMNGGVVINLVGQA*GKEPLMGLGMG 793
            RI++TGGAGFVGSHL D+L+  G  V VVDNFFTGRK NV H  G+ NFELI HDVVEPL +EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP  HPQ E YWG+VNPIG R+CYDEGK     + +   ++     + + +      P     +G VV N + QA   EPL   G G
Sbjct:   90 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGV-EVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSG 293          
BLAST of EY720851 vs. ExPASy Swiss-Prot
Match: UXS1_HUMAN (UDP-glucuronic acid decarboxylase 1 OS=Homo sapiens GN=UXS1 PE=1 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.445e-61
Identity = 121/205 (59.02%), Postives = 143/205 (69.76%), Query Frame = 2
Query:  179 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKANC*NVDHGLPQRSWAWRLGLLKCSTLMDPVCVFMNGGVVINLVGQA*GKEPLMGLGMG 793
            RI++TGGAGFVGSHL D+L+  G  V VVDNFFTGRK NV H  G+ NFELI HDVVEPL +EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP  HPQ E YWG+VNPIG R+CYDEGK     + +   ++     + + +      P     +G VV N + QA   EPL   G G
Sbjct:   90 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGV-EVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSG 293          
BLAST of EY720851 vs. ExPASy Swiss-Prot
Match: UXS1_XENTR (UDP-glucuronic acid decarboxylase 1 OS=Xenopus tropicalis GN=uxs1 PE=2 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 9.364e-61
Identity = 120/206 (58.25%), Postives = 143/206 (69.42%), Query Frame = 2
Query:  179 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKANC*NVDHGLPQRSWAWRLGLLKCSTLMDPVCVFMNGGVVINLVGQA*GKEPLMGLGMGK 796
            RI++TGGAGFVGSHL D+L+  G  V VVDNFFTGRK NV H  G+ NFELI HDVVEPL +EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP  HPQ E YWG+VNPIG R+CYDEGK     + +   ++     + + +      P     +G VV N + QA   E L   G G+
Sbjct:   91 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEEYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGV-EVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEQLTVYGSGE 295          
BLAST of EY720851 vs. ExPASy Swiss-Prot
Match: GALE_METJA (Putative UDP-glucose 4-epimerase OS=Methanocaldococcus jannaschii GN=MJ0211 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.465e-13
Identity = 50/143 (34.97%), Postives = 76/143 (53.15%), Query Frame = 2
Query:  182 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLE------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKR--VGARFLLTSTSEVYGDPLQHPQKETYWGNVNPI 586
            I+VTGGAGF+GSH+VD+LI     VI++DN  TG K N+     NP  E +  D+ +  L E      V+ + H A   +  +   NPV     NV+GT+N+L + ++  +      +S   VYG+P   P  E +   +NP+
Sbjct:    2 ILVTGGAGFIGSHIVDKLIENNYDVIILDNLTTGNKNNI-----NPKAEFVNADIRDKDLDEKINFKDVEVVIHQAAQINVRNSVENPVYDGDINVLGTINILEMMRKYDIDKIVFASSGGAVYGEPNYLPVDENH--PINPL 137          
BLAST of EY720851 vs. ExPASy Swiss-Prot
Match: GALE_STRMU (UDP-glucose 4-epimerase OS=Streptococcus mutans GN=galE PE=3 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.339e-11
Identity = 46/149 (30.87%), Postives = 77/149 (51.68%), Query Frame = 2
Query:  176 LRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLL--------EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLL-TSTSEVYGDPLQHPQKETY-WGNVNPIG 589
            + I+V GGAG++GSH+VDRLI +G + V+VVD+  TG +  V     +P  +  + D+ +   +        +VD + H A  +        P+K    N  G + +L +    G ++++ +ST+  YG P + P KET     +NP G
Sbjct:    1 MAILVLGGAGYIGSHMVDRLIEKGEEEVVVVDSLVTGHRAAV-----HPAAKFYQGDLADREFMSMVFRENPDVDAVIHFAAYSLVAESMKKPLKYFDNNTAGMIKLLEVMSEFGVKYIVFSSTAATYGIPDEIPIKETTPQRPINPYG 144          
BLAST of EY720851 vs. ExPASy Swiss-Prot
Match: GALE_LACCA (UDP-glucose 4-epimerase OS=Lactobacillus casei GN=galE PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.054e-11
Identity = 43/137 (31.39%), Postives = 70/137 (51.09%), Query Frame = 2
Query:  176 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLL-------EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLTSTSEVYGDPLQHPQKET 562
            + I V GGAG++GSH V +L+A G+ V+V+DN  TG ++ V     +P     + D+ +   L       ++D I H A  +       +P+K    N  G + +L    + G  + + +ST+  YG+P Q P KET
Sbjct:    1 MTIAVLGGAGYIGSHTVKQLLAAGEDVVVLDNLITGHRKAV-----DPRARFYQGDIRDYHFLSQVFSQEKIDGIVHFAAFSIVPESMKDPLKYFDNNTGGMITLLEAMNQFGIKKIVFSSTAATYGEPKQVPIKET 132          
BLAST of EY720851 vs. ExPASy Swiss-Prot
Match: GALE_STRTR (UDP-glucose 4-epimerase OS=Streptococcus thermophilus GN=galE PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.805e-11
Identity = 46/144 (31.94%), Postives = 74/144 (51.39%), Query Frame = 2
Query:  176 LRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLE---VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLL-TSTSEVYGDPLQHPQKETYWGN-VNPIG 589
            + I+V GGAG++GSH+VDRL+ +G + V+VVD+  TG +  V         +L   D +  +  E   VD + H A  +        P+K    N  G + +L +    G ++++ +ST+  YG P + P  ET   N +NP G
Sbjct:    1 MAILVLGGAGYIGSHMVDRLVEKGQEKVVVVDSLVTGHRAAVHPDAIFYQGDLSDQDFMRKVFKENPDVDAVIHFAAYSLVGESMEKPLKYFDNNTAGMVKLLEVMNECGVKYIVFSSTAATYGIPEEIPILETTPQNPINPYG 144          
The following BLAST results are available for this feature:
BLAST of EY720851 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
UXS1_DANRE2.661e-6574.66UDP-glucuronic acid decarboxylase 1 OS=Danio rerio... [more]
UXS1_RAT1.445e-6159.02UDP-glucuronic acid decarboxylase 1 OS=Rattus norv... [more]
UXS1_PONAB1.445e-6159.02UDP-glucuronic acid decarboxylase 1 OS=Pongo abeli... [more]
UXS1_MOUSE1.445e-6159.02UDP-glucuronic acid decarboxylase 1 OS=Mus musculu... [more]
UXS1_HUMAN1.445e-6159.02UDP-glucuronic acid decarboxylase 1 OS=Homo sapien... [more]
UXS1_XENTR9.364e-6158.25UDP-glucuronic acid decarboxylase 1 OS=Xenopus tro... [more]
GALE_METJA1.465e-1334.97Putative UDP-glucose 4-epimerase OS=Methanocaldoco... [more]
GALE_STRMU2.339e-1130.87UDP-glucose 4-epimerase OS=Streptococcus mutans GN... [more]
GALE_LACCA3.054e-1131.39UDP-glucose 4-epimerase OS=Lactobacillus casei GN=... [more]
GALE_STRTR6.805e-1131.94UDP-glucose 4-epimerase OS=Streptococcus thermophi... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-015-C03-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720851 ID=EY720851; Name=EY720851; organism=Citrus sinensis; type=EST; length=850bp
CCACGCGTCCGCGTCGTATCCCGCCTCGTACGGTGGGCCCCGCGGCCACG
TAGCGATCTCGGATTCGCTGTCGTATTACCCCGTCGAGACGTACCAAAGA
GCCTACAACCCTCGCGTCGGGTTCGGGGCGGTGAATTCGGGCGGGAAGAT
TCCCCTGGGGCTGAAACGGAAGGGGCTTAGAATAGTCGTCACGGGTGGGG
CGGGGTTCGTCGGGTCTCACCTCGTGGACCGTCTGATCGCGAGGGGCGAC
AGCGTGATCGTTGTAGATAATTTCTTCACGGGAAGGAAAGAAAACGTGAT
GCACCACTTTGGTAACCCGAATTTCGAGCTCATCAGACACGACGTCGTCG
AGCCTCTCTTGCTTGAAGTCGACCAGATCTACCATCTCGCTTGTCCCGCA
TCTCCAGTTCATTACAAATTCAACCCCGTCAAGACTATTAAGACGAATGT
GGTGGGAACATTGAACATGCTTGGATTGGCGAAGAGAGTGGGAGCGAGGT
TCTTATTAACGAGTACCAGTGAAGTATACGGTGACCCTCTTCAGCATCCA
CAGAAGGAGACTTACTGGGGCAACGTCAATCCTATCGGTGTCCGAAGTTG
TTACGATGAAGGGAAAGCGAACTGCTGAAACGTTGACCATGGACTACCAC
AGAGGAGCTGGGCGTGGAGGTTAGGATTGCTAAAATGTTCAACACTTATG
GACCCCGTATGTGTATTCATGAATGGCGGTGTGGTCATTAATTTGGTTGG
TCAGGCTTAAGGGAAGGAGCCTTTAATGGGTTTGGGGATGGGGAAGCCAA
GTGGAGGTGTCGATTTGGTGCGGATTTGGGGGGGGGTCGAGGGGCTCGGG
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