FC922012

Overview
NameFC922012
Unique NameFC922012
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length370
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13555 contig Csv1_Contig13555:1..370. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC922012 vs. ExPASy Swiss-Prot
Match: F3PH_PETHY (Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=CYP75B2 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.226e-14
Identity = 36/68 (52.94%), Postives = 44/68 (64.71%), Query Frame = -3 
Query:   18 PPGPKPWPIIGNLDLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXVEMAEAFLKTHDALFSYRP 221
            PPGPKPWPIIGNL  +GP P++S  A+++ YGP+M LK             +A  FLKTHDA FS RP
Sbjct:   34 PPGPKPWPIIGNLVHLGPKPHQSTAAMAQTYGPLMYLKMGFVDVVVAASASVAAQFLKTHDANFSSRP 101
[Close]
BLAST of FC922012 vs. ExPASy Swiss-Prot
Match: C75A6_CAMME (Flavonoid 3',5'-hydroxylase OS=Campanula medium GN=CYP75A6 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.312e-12
Identity = 35/68 (51.47%), Postives = 42/68 (61.76%), Query Frame = -3 
Query:   18 PPGPKPWPIIGNLDLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXVEMAEAFLKTHDALFSYRP 221
            PPGP  WPIIG L L+G +P+ S+  ++ KYGPIM LK            + A AFLKTHDA FS RP
Sbjct:   39 PPGPTGWPIIGALPLLGTMPHVSLADMAVKYGPIMYLKLGSKGTVVASNPKAARAFLKTHDANFSNRP 106
[Close]
BLAST of FC922012 vs. ExPASy Swiss-Prot
Match: F3PH_ARATH (Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana GN=CYP75B1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.150e-12
Identity = 32/68 (47.06%), Postives = 41/68 (60.29%), Query Frame = -3 
Query:   18 PPGPKPWPIIGNLDLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXVEMAEAFLKTHDALFSYRP 221
            PPGP PWPIIGNL  +G  P+R++ A+   YGPI+ L+             +AE FLK HDA F+ RP
Sbjct:   34 PPGPNPWPIIGNLPHMGTKPHRTLSAMVTTYGPILHLRLGFVDVVVAASKSVAEQFLKIHDANFASRP 101
[Close]
BLAST of FC922012 vs. ExPASy Swiss-Prot
Match: C71A2_SOLME (Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71A2 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.713e-11
Identity = 31/68 (45.59%), Postives = 42/68 (61.76%), Query Frame = -3 
Query:   15 PGPKPWPIIGNLDLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXVEMAEAFLKTHDALFSYRPK 218
            P P+  PIIGNL  +G LP+RS+H LS+KYGP+M L            V+ A   +KTHD +++ RPK
Sbjct:   39 PSPRKLPIIGNLHQLGSLPHRSLHKLSQKYGPVMLLHFGSKPVIVASSVDAARDIMKTHDVVWASRPK 106
The following BLAST results are available for this feature:
BLAST of FC922012 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
F3PH_PETHY3.226e-1452.94Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=C... [more]
C75A6_CAMME2.312e-1251.47Flavonoid 3',5'-hydroxylase OS=Campanula medium GN... [more]
F3PH_ARATH5.150e-1247.06Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana... [more]
C71A2_SOLME9.713e-1145.59Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71... [more]
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Properties
Property NameValue
Genbank descriptionC06056E10T7 RindPdigS Citrus sinensis cDNA clone C06056E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC922012 ID=FC922012; Name=FC922012; organism=Citrus sinensis; type=EST; length=370bp
CTTACCTGCGCCAGTTTGGGCCGGTAAGAAAACAGAGCGTCGTGGGTTTT
AAGGAAAGCCTCCGCCATCTCAACGGAAGATCCCACAACAACGGGGAATG
ATCCGAATTTGAGTTGCATGATAGGCCCATATTTTTCGGACAGAGCATGG
ATGGACCGATAGGGAAGTGGGCCTATGAGGTCGAGGTTTCCGATGATCGG
CCATGGCTTTGGGCCAGGCGGTAAGTTGAGTTCCCGGCGGCGAAGACGGA
GGGAGAGGAGTATGAGGGCTAGGGTTGCTAACCATGCGGCCAAGTAATAA
GCCCAAGAGTGATGAATGAGCTCCATTGTAGTAAACATTAGCTAGTTTAC
TGGTGTGGAGTTGCCCCCGC
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