EY679966

Overview
NameEY679966
Unique NameEY679966
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length902
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679966 vs. ExPASy Swiss-Prot
Match: PORB_ARATH (Protochlorophyllide reductase B, chloroplastic OS=Arabidopsis thaliana GN=PORB PE=1 SV=3)

HSP 1 Score: 363.229 bits (931), Expect = 1.128e-99
Identity = 175/199 (87.94%), Postives = 182/199 (91.46%), Query Frame = 3
Query:    6 PLDVLVCNAAVYLPTAKEPTFTAEGFELSVGTNHLGHFXXXXXXXXXXKQSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGFAGGLNGLNSSSMIDGGDFDGAKAYKDSKVCNMLTMQEFHRRFHEETGIAFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSENEAGKRLAHVVSDPSLTKSGVYW 602
            PLDVLVCNAAVY PTAKEPT++AEGFELSV TNHLGHF          K+SDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRG AGGLNGLNSS+MIDGGDFDGAKAYKDSKVCNMLTMQEFHRRFHEETG+ FASLYPGCIA+TGLFREHIPLFR LFPPFQKYITKGYVSE E+GKRLA VVSDPSLTKSGVYW
Sbjct:  166 PLDVLVCNAAVYFPTAKEPTYSAEGFELSVATNHLGHFLLARLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAGGLNGLNSSAMIDGGDFDGAKAYKDSKVCNMLTMQEFHRRFHEETGVTFASLYPGCIASTGLFREHIPLFRALFPPFQKYITKGYVSETESGKRLAQVVSDPSLTKSGVYW 364          
BLAST of EY679966 vs. ExPASy Swiss-Prot
Match: POR_DAUCA (Protochlorophyllide reductase, chloroplastic OS=Daucus carota GN=POR1 PE=2 SV=1)

HSP 1 Score: 359.762 bits (922), Expect = 1.247e-98
Identity = 173/200 (86.50%), Postives = 182/200 (91.00%), Query Frame = 3
Query:    3 RPLDVLVCNAAVYLPTAKEPTFTAEGFELSVGTNHLGHFXXXXXXXXXXKQSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGFAGGLNGLNSSSMIDGGDFDGAKAYKDSKVCNMLTMQEFHRRFHEETGIAFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSENEAGKRLAHVVSDPSLTKSGVYW 602
            RPLDVLVCNAAVY PTAKEPT+TA+GFELSVGTNHLGHF           +SDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRG AGGLNG+NSS+MIDG +FDGAKAYKDSKVCNMLTMQEFHRR+HEETGI FASLYPGCIATTGLFREHIPLFR LFPPFQKYITKGYVSE E+GKRLA VVS+PSLTKSGVYW
Sbjct:  162 RPLDVLVCNAAVYFPTAKEPTYTADGFELSVGTNHLGHFLLSRLLLDDLNKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAGGLNGMNSSAMIDGAEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRTLFPPFQKYITKGYVSEAESGKRLAQVVSEPSLTKSGVYW 361          
BLAST of EY679966 vs. ExPASy Swiss-Prot
Match: PORA_ARATH (Protochlorophyllide reductase A, chloroplastic OS=Arabidopsis thaliana GN=PORA PE=2 SV=2)

HSP 1 Score: 359.377 bits (921), Expect = 1.628e-98
Identity = 175/199 (87.94%), Postives = 180/199 (90.45%), Query Frame = 3
Query:    6 PLDVLVCNAAVYLPTAKEPTFTAEGFELSVGTNHLGHFXXXXXXXXXXKQSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGFAGGLNGLNSSSMIDGGDFDGAKAYKDSKVCNMLTMQEFHRRFHEETGIAFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSENEAGKRLAHVVSDPSLTKSGVYW 602
            PLDVLVCNAAVY PTA +PTFTAEGFELSVG NHLGHF          K SDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRG AGGLNGLNSS+MIDGGDF GAKAYKDSKVCNMLTMQEFHRRFHE+TGI FASLYPGCIATTGLFREHIPLFR LFPPFQKYITKGYVSE+EAGKRLA VV+DPSLTKSGVYW
Sbjct:  170 PLDVLVCNAAVYQPTANQPTFTAEGFELSVGINHLGHFLLSRLLIDDLKNSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAGGLNGLNSSAMIDGGDFVGAKAYKDSKVCNMLTMQEFHRRFHEDTGITFASLYPGCIATTGLFREHIPLFRTLFPPFQKYITKGYVSESEAGKRLAQVVADPSLTKSGVYW 368          
BLAST of EY679966 vs. ExPASy Swiss-Prot
Match: POR_PEA (Protochlorophyllide reductase, chloroplastic OS=Pisum sativum GN=3PCR PE=1 SV=1)

HSP 1 Score: 358.221 bits (918), Expect = 3.627e-98
Identity = 173/199 (86.93%), Postives = 181/199 (90.95%), Query Frame = 3
Query:    6 PLDVLVCNAAVYLPTAKEPTFTAEGFELSVGTNHLGHFXXXXXXXXXXKQSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGFAGGLNGLNSSSMIDGGDFDGAKAYKDSKVCNMLTMQEFHRRFHEETGIAFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSENEAGKRLAHVVSDPSLTKSGVYW 602
            PLDVL+ NAAVY PTAKEP+FTA+GFE+SVGTNHLGHF          K+SDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRG AGGL GLNSS+MIDGGDFDGAKAYKDSKVCNMLTMQEFHRR+HEETGI FASLYPGCIATTGLFREHIPLFR LFPPFQKYITKGYVSE E+GKRLA VVSDPSLTKSGVYW
Sbjct:  164 PLDVLINNAAVYFPTAKEPSFTADGFEISVGTNHLGHFLLSRLLLEDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAGGLTGLNSSAMIDGGDFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRTLFPPFQKYITKGYVSEEESGKRLAQVVSDPSLTKSGVYW 362          
BLAST of EY679966 vs. ExPASy Swiss-Prot
Match: PORA_CUCSA (Protochlorophyllide reductase, chloroplastic OS=Cucumis sativus GN=PORA PE=2 SV=1)

HSP 1 Score: 356.295 bits (913), Expect = 1.378e-97
Identity = 174/200 (87.00%), Postives = 183/200 (91.50%), Query Frame = 3
Query:    3 RPLDVLVCNAAVYLPTAKEPTFTAEGFELSVGTNHLGHFXXXXXXXXXXKQSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGFAGGLNGLNSSSMIDGGDFDGAKAYKDSKVCNMLTMQEFHRRFHEETGIAFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSENEAGKRLAHVVSDPSLTKSGVYW 602
            RPLDVLVCNAAVYLPTAKEPTFTAEGFELSVGTNHLGHF           +S YPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRG AGGLNGL SS MIDGG+FDGAKAYKDSKVCNMLTMQEFH+R+HEETGI FASLYPGCIATTGLFREHIPLFR+LFPPFQK+IT+GYVSE+EAGKRLA VVS+PSLTKSGVYW
Sbjct:  163 RPLDVLVCNAAVYLPTAKEPTFTAEGFELSVGTNHLGHFLLSRLLLEDLNKSSYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAGGLNGLKSS-MIDGGEFDGAKAYKDSKVCNMLTMQEFHKRYHEETGITFASLYPGCIATTGLFREHIPLFRILFPPFQKFITQGYVSEDEAGKRLAQVVSEPSLTKSGVYW 361          
BLAST of EY679966 vs. ExPASy Swiss-Prot
Match: PORC_ARATH (Protochlorophyllide reductase C, chloroplastic OS=Arabidopsis thaliana GN=PORC PE=1 SV=1)

HSP 1 Score: 352.058 bits (902), Expect = 2.599e-96
Identity = 172/200 (86.00%), Postives = 180/200 (90.00%), Query Frame = 3
Query:    3 RPLDVLVCNAAVYLPTAKEPTFTAEGFELSVGTNHLGHFXXXXXXXXXXKQSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGFAGGLNGLNSSSMIDGGDFDGAKAYKDSKVCNMLTMQEFHRRFHEETGIAFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSENEAGKRLAHVVSDPSLTKSGVYW 602
            +PLDVLVCNAAVY PTAKEP+FTAEGFE+SVGTNHLGHF          K+SDYPSKR+IIVGSITGNTNTLAGNVPPKANLGDLRG A GLNG NSS MIDGG+FDGAKAYKDSKVCNMLTMQE HRR+HEETG+ FASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSE EAGKRLA VVSDPSL KSGVYW
Sbjct:  166 QPLDVLVCNAAVYQPTAKEPSFTAEGFEISVGTNHLGHFLLSRLLLDDLKKSDYPSKRMIIVGSITGNTNTLAGNVPPKANLGDLRGLASGLNGQNSS-MIDGGEFDGAKAYKDSKVCNMLTMQELHRRYHEETGVTFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSDPSLGKSGVYW 364          
BLAST of EY679966 vs. ExPASy Swiss-Prot
Match: PORB_HORVU (Protochlorophyllide reductase B, chloroplastic OS=Hordeum vulgare GN=PORB PE=2 SV=1)

HSP 1 Score: 350.517 bits (898), Expect = 7.563e-96
Identity = 167/199 (83.92%), Postives = 179/199 (89.95%), Query Frame = 3
Query:    6 PLDVLVCNAAVYLPTAKEPTFTAEGFELSVGTNHLGHFXXXXXXXXXXKQSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGFAGGLNGLNSSSMIDGGDFDGAKAYKDSKVCNMLTMQEFHRRFHEETGIAFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSENEAGKRLAHVVSDPSLTKSGVYW 602
            P+DV+VCNAAVY PTAKEP+FTA+GFE+SVG NHLGHF          K SDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRG A GLNG+ S++MIDG +FDGAKAYKDSKVCNMLTMQEFHRR+HEETG+ FASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSE EAGKRLA VVS+PSLTKSGVYW
Sbjct:  160 PIDVVVCNAAVYQPTAKEPSFTADGFEMSVGVNHLGHFLLARELLEDLKASDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAAGLNGVGSAAMIDGAEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGVTFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSEPSLTKSGVYW 358          
BLAST of EY679966 vs. ExPASy Swiss-Prot
Match: PORB_ORYSJ (Protochlorophyllide reductase B, chloroplastic OS=Oryza sativa subsp. japonica GN=PORB PE=2 SV=1)

HSP 1 Score: 347.436 bits (890), Expect = 6.403e-95
Identity = 165/199 (82.91%), Postives = 179/199 (89.95%), Query Frame = 3
Query:    6 PLDVLVCNAAVYLPTAKEPTFTAEGFELSVGTNHLGHFXXXXXXXXXXKQSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGFAGGLNGLNSSSMIDGGDFDGAKAYKDSKVCNMLTMQEFHRRFHEETGIAFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSENEAGKRLAHVVSDPSLTKSGVYW 602
            P+DV+VCNAAVY PTAK+P+FTA+GFE+SVG NHLGHF            SDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRG A GL+G++SS+MIDGG+FDGAKAYKDSKVCNMLTMQEFHRR+H ETG+ FASLYPGCIATTGLFREH+PLFRLLFPPFQKYITKGYVSE EAGKRLA VVSDPSLTKSGVYW
Sbjct:  163 PVDVVVCNAAVYQPTAKQPSFTADGFEMSVGVNHLGHFLLARELLADLTSSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLASGLDGVSSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHGETGVTFASLYPGCIATTGLFREHVPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSDPSLTKSGVYW 361          
BLAST of EY679966 vs. ExPASy Swiss-Prot
Match: PORA_ORYSJ (Protochlorophyllide reductase A, chloroplastic OS=Oryza sativa subsp. japonica GN=PORA PE=2 SV=1)

HSP 1 Score: 335.495 bits (859), Expect = 2.518e-91
Identity = 159/200 (79.50%), Postives = 176/200 (88.00%), Query Frame = 3
Query:    6 PLDVLVCNAAVYLPTAKEPTFTAEGFELSVGTNHLGHFXXXXXXXXXXKQSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGFAGGLNGLNSSSMIDGGD-FDGAKAYKDSKVCNMLTMQEFHRRFHEETGIAFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSENEAGKRLAHVVSDPSLTKSGVYW 602
            PLD LVCNAA+Y PTA++PTFTA+G+E+SVG NHLGHF          K+SDYPS+RLII+GSITGNTNTLAGNVPPKA LGDLRG AGGL G N S+MIDG + FDGAKAYKDSK+CNMLTMQEFHRRFHEETGI FASLYPGCIATTGLFREHIPLFRLLFPPFQ+++TKG+VSE E+GKRLA VV DPSLTKSGVYW
Sbjct:  151 PLDALVCNAAIYRPTARQPTFTADGYEMSVGVNHLGHFLLARLMLDDLKKSDYPSRRLIILGSITGNTNTLAGNVPPKAGLGDLRGLAGGLRGQNGSAMIDGAESFDGAKAYKDSKICNMLTMQEFHRRFHEETGITFASLYPGCIATTGLFREHIPLFRLLFPPFQRFVTKGFVSEAESGKRLAQVVGDPSLTKSGVYW 350          
BLAST of EY679966 vs. ExPASy Swiss-Prot
Match: POR_AVESA (Protochlorophyllide reductase (Fragment) OS=Avena sativa PE=2 SV=1)

HSP 1 Score: 328.176 bits (840), Expect = 4.020e-89
Identity = 156/200 (78.00%), Postives = 175/200 (87.50%), Query Frame = 3
Query:    6 PLDVLVCNAAVYLPTAKEPTFTAEGFELSVGTNHLGHFXXXXXXXXXXKQSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGFAGGLNGLNSSSMIDGGD-FDGAKAYKDSKVCNMLTMQEFHRRFHEETGIAFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSENEAGKRLAHVVSDPSLTKSGVYW 602
            PLDVLVCNAA+Y PTA++PTFTAEG E+SVG NHLGHF          ++SDYPS+RL+IVGSITGN NTLAGNVPPKANLGDLRG AGGL G + S+MIDG + FDGAKAYKDSKVCNMLTMQEFHRR+HE+TGI F+SLYPGCIATTGLFREHIPLFR LFPPFQK++TKG+VSE E+GKRLA VV +PSLTKSGVYW
Sbjct:   77 PLDVLVCNAAIYRPTARKPTFTAEGVEMSVGVNHLGHFLLARLLLEDLQKSDYPSRRLVIVGSITGNDNTLAGNVPPKANLGDLRGLAGGLTGASGSAMIDGDESFDGAKAYKDSKVCNMLTMQEFHRRYHEDTGITFSSLYPGCIATTGLFREHIPLFRTLFPPFQKFVTKGFVSEAESGKRLAQVVGEPSLTKSGVYW 276          
The following BLAST results are available for this feature:
BLAST of EY679966 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
PORB_ARATH1.128e-9987.94Protochlorophyllide reductase B, chloroplastic OS=... [more]
POR_DAUCA1.247e-9886.50Protochlorophyllide reductase, chloroplastic OS=Da... [more]
PORA_ARATH1.628e-9887.94Protochlorophyllide reductase A, chloroplastic OS=... [more]
POR_PEA3.627e-9886.93Protochlorophyllide reductase, chloroplastic OS=Pi... [more]
PORA_CUCSA1.378e-9787.00Protochlorophyllide reductase, chloroplastic OS=Cu... [more]
PORC_ARATH2.599e-9686.00Protochlorophyllide reductase C, chloroplastic OS=... [more]
PORB_HORVU7.563e-9683.92Protochlorophyllide reductase B, chloroplastic OS=... [more]
PORB_ORYSJ6.403e-9582.91Protochlorophyllide reductase B, chloroplastic OS=... [more]
PORA_ORYSJ2.518e-9179.50Protochlorophyllide reductase A, chloroplastic OS=... [more]
POR_AVESA4.020e-8978.00Protochlorophyllide reductase (Fragment) OS=Avena ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-006-A02-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679966 ID=EY679966; Name=EY679966; organism=Citrus sinensis; type=EST; length=902bp
GCAGACCTCTCGATGTGCTAGTTTGCAATGCTGCTGTTTATTTGCCAACT
GCTAAGGAGCCTACATTTACGGCTGAGGGATTTGAACTTAGTGTTGGAAC
CAACCATCTTGGTCACTTCCTCCTTTCACGGCTGTTGCTTGATGACTTGA
AGCAATCTGATTACCCATCAAAGCGTCTCATCATCGTTGGCTCAATCACA
GGAAACACAAATACCTTGGCTGGTAATGTACCTCCTAAGGCCAACCTTGG
GGACTTAAGGGGATTTGCTGGAGGCTTAAATGGGCTAAACAGCTCATCCA
TGATTGACGGTGGAGATTTTGACGGTGCCAAGGCCTACAAGGACAGCAAA
GTCTGCAACATGCTTACCATGCAAGAGTTTCACAGGCGGTTCCACGAGGA
AACTGGCATCGCATTCGCTTCCCTTTACCCTGGCTGCATTGCCACAACAG
GCTTGTTCAGGGAGCACATTCCCTTGTTCAGACTTCTCTTCCCCCCATTC
CAAAAGTACATCACCAAGGGTTATGTCTCTGAAAATGAAGCTGGAAAAAG
ACTTGCTCATGTTGTGAGCGATCCAAGCTTGACAAAATCAGGTGTTTACT
GGGAGCTGGAACAAGGAATCCACTTTCATTTGAAAATTCAGTTTGTCTCA
AGGAAACTAGTGGCCTTTAAAAAAGGCACGTAAAGGTCGGGAAGAAAAAG
TGAAAAATTTTGTGGGTTTGGCCTAATTTCAAACCCTGGAAAATTTCAAA
ATCTCCCATTTTATGTTTCGGGGAGGGTTTTTATAACCTTGAAAGGGTTT
TTTAAGAAGCCGAAATTTTGGAAATATGGGGCCCACTTTTTCCATTTGAG
AATAGGTTAAATGGCTTTGTGGGAAAAAAAAAAATGTGCTACAAACAAGC
CC
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