FC922003

Overview
NameFC922003
Unique NameFC922003
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length303
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13457 contig Csv1_Contig13457:1187..1489. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC922003 vs. ExPASy Swiss-Prot
Match: C76B1_HELTU (7-ethoxycoumarin O-deethylase OS=Helianthus tuberosus GN=CYP76B1 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.511e-19
Identity = 43/95 (45.26%), Postives = 66/95 (69.47%), Query Frame = -2
Query:   15 VSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDTNQHLRRKKSQDLLAYVQE 299
            +SL+ GQ+TT+V SSA  A+E+L+ QD +F  R +PDA+ A+ H    + +L V T WR LR+I +S+ FS+  L+  QHLR KK ++L+AY ++
Sbjct:   63 MSLQLGQITTLVISSATAAEEVLKKQDLAFSTRNVPDAVRAYNHERHSISFLHVCTEWRTLRRIVSSNIFSNSSLEAKQHLRSKKVEELIAYCRK 157          
BLAST of FC922003 vs. ExPASy Swiss-Prot
Match: C76C3_ARATH (Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CYP76C3 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 4.709e-13
Identity = 37/95 (38.95%), Postives = 54/95 (56.84%), Query Frame = -2
Query:   15 VSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDTNQHLRRKKSQDLLAYVQE 299
            +SLK G++T VV SS   AKE L+  D     RT  DA+ A  HH+  + W+P +  WR L+K    +  S + LD  Q LR +K ++L++ V E
Sbjct:   73 MSLKLGRLTAVVISSPEAAKEALRTHDHVMSARTFNDALRAFDHHKHSIVWIPPSARWRFLKKTITKYLLSPQNLDAIQSLRMRKVEELVSLVNE 167          
BLAST of FC922003 vs. ExPASy Swiss-Prot
Match: C76C4_ARATH (Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CYP76C4 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.375e-11
Identity = 35/97 (36.08%), Postives = 58/97 (59.79%), Query Frame = -2
Query:   12 VSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATL-WRNLRKICNSHAFSSRQLDTNQHLRRKKSQDLLAYVQEN 299
            +SLKFG + +VV +S   A+E+L+  D     R   D+I   GH E  + WLP ++  WR LRK+  +  FS ++ +  + LR KK Q+L++++ E+
Sbjct:   73 MSLKFGCLNSVVITSPEAAREVLRTHDQILSGRKSNDSIRCFGHEEVSVIWLPPSSARWRMLRKLSVTLMFSPQRTEATKALRMKKVQELVSFMNES 169          
BLAST of FC922003 vs. ExPASy Swiss-Prot
Match: C80B2_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS=Eschscholzia californica GN=CYP80B2 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.407e-11
Identity = 29/94 (30.85%), Postives = 52/94 (55.32%), Query Frame = -2
Query:   15 SLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDTNQHLRRKKSQDLLAYVQE 296
            +LK G  T VV S+++ A EIL+  D     R +  +    GH E  + W      W+NLRK+C +  F+ + +++  H+R KK ++++ Y+ +
Sbjct:   65 TLKMGTETVVVASTSSAASEILKTHDRILSARYVFQSFRVKGHVENSIVWSDCTETWKNLRKVCRTELFTQKMIESQAHVREKKCEEMVEYLMK 158          
BLAST of FC922003 vs. ExPASy Swiss-Prot
Match: C80B1_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (Fragment) OS=Eschscholzia californica GN=CYP80B1 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.407e-11
Identity = 29/94 (30.85%), Postives = 52/94 (55.32%), Query Frame = -2
Query:   15 SLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDTNQHLRRKKSQDLLAYVQE 296
            +LK G  T VV S+++ A EIL+  D     R +  +    GH E  + W      W+NLRK+C +  F+ + +++  H+R KK ++++ Y+ +
Sbjct:   64 TLKMGTETVVVASTSSAASEILKTHDRILSARYVFQSFRVKGHVENSIVWSDCTETWKNLRKVCRTELFTQKMIESQAHVREKKCEEMVEYLMK 157          
BLAST of FC922003 vs. ExPASy Swiss-Prot
Match: C76A2_SOLME (Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76A2 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.819e-11
Identity = 29/97 (29.90%), Postives = 52/97 (53.61%), Query Frame = -2
Query:    3 LKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDTNQHLRRKKSQDLLAYVQENCRA 293
            LK G   T+V  +A  ++E+ +N D SF NR IPD   AH +++  +   P    WR  R+IC    F  +++   + +RRK   ++L ++++   +
Sbjct:   72 LKLGSTYTMVVQTAQASEELFKNHDISFANRVIPDVNQAHSYYQGSLAIAPYGPFWRFQRRICTIEMFVHKKISETEPVRRKCVDNMLKWIEKEANS 168          
The following BLAST results are available for this feature:
BLAST of FC922003 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
C76B1_HELTU1.511e-1945.267-ethoxycoumarin O-deethylase OS=Helianthus tubero... [more]
C76C3_ARATH4.709e-1338.95Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CY... [more]
C76C4_ARATH3.375e-1136.08Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CY... [more]
C80B2_ESCCA4.407e-1130.85(S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS... [more]
C80B1_ESCCA4.407e-1130.85(S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (F... [more]
C76A2_SOLME9.819e-1129.90Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76... [more]
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Properties
Property NameValue
Genbank descriptionC06056D12T7 RindPdigS Citrus sinensis cDNA clone C06056D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC922003 ID=FC922003; Name=FC922003; organism=Citrus sinensis; type=EST; length=303bp
CCTGCACGGCAATTTTCTTGGACATAAGCTAGAAGATCTTGGCTTTTCTT
ACGCCGAAGGTGCTGATTGGTATCGAGTTGGCGACTAGAGAAAGCATGTG
AGTTGCATATTTTTCTAAGATTTCTCCACAGTGTCGCCACAGGCAGCCAG
GGCATCCCGAATTCATGATGGCCGTGGGCGTAGATTGCGTCTGGGATTGT
TCGATTACAGAAAGATGTGTCTTGATTTTGAAGGATTTCTTTGGCCATGG
CTGCAGAAGAAAAGACAACTGTGGTCACCTGGCCAAATTTTAGACTCACC
CGC
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