EG358229

Overview
NameEG358229
Unique NameEG358229
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length352
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10306 contig Csv1_Contig10306:50..401. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EG358229 vs. ExPASy Swiss-Prot
Match: PURA_ARATH (Adenylosuccinate synthetase, chloroplastic OS=Arabidopsis thaliana GN=At3g57610 PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 1.125e-30
Identity = 62/73 (84.93%), Postives = 69/73 (94.52%), Query Frame = 1
Query:    1 TPVKSFPADLLLLEQLKVEYEVLPGWQSDISSVRNYSDLPKGAREFVERIEELVGVPINYIGVGPGRDALIYK 219
            TPVKSFP DL LLE+L VEYEVLPGW+SDISSVRNYSDLPK A+++VERIEELVGVPI+YIG+GPGRDALIYK
Sbjct:  418 TPVKSFPGDLRLLEELHVEYEVLPGWKSDISSVRNYSDLPKAAQQYVERIEELVGVPIHYIGIGPGRDALIYK 490          
BLAST of EG358229 vs. ExPASy Swiss-Prot
Match: PURA_MAIZE (Adenylosuccinate synthetase, chloroplastic OS=Zea mays PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.423e-25
Identity = 54/71 (76.06%), Postives = 63/71 (88.73%), Query Frame = 1
Query:    7 VKSFPADLLLLEQLKVEYEVLPGWQSDISSVRNYSDLPKGAREFVERIEELVGVPINYIGVGPGRDALIYK 219
            ++SFP DL  LEQ++V YEVLPGWQSDISSVR Y +LP+ AR +VERIEELVGVP++YIGVGPGRDALIYK
Sbjct:  414 LQSFPGDLDTLEQVQVNYEVLPGWQSDISSVRRYDELPQAARLYVERIEELVGVPVHYIGVGPGRDALIYK 484          
BLAST of EG358229 vs. ExPASy Swiss-Prot
Match: PURA_WHEAT (Adenylosuccinate synthetase, chloroplastic (Fragment) OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.858e-25
Identity = 53/71 (74.65%), Postives = 63/71 (88.73%), Query Frame = 1
Query:    7 VKSFPADLLLLEQLKVEYEVLPGWQSDISSVRNYSDLPKGAREFVERIEELVGVPINYIGVGPGRDALIYK 219
            ++SFP DL  LEQ++V YEVLPGW SDISSVR+YS+LP+ AR +VERIEEL GVP++YIGVGPGRDALIYK
Sbjct:  406 LQSFPGDLDTLEQVQVNYEVLPGWDSDISSVRSYSELPQAARRYVERIEELAGVPVHYIGVGPGRDALIYK 476          
BLAST of EG358229 vs. ExPASy Swiss-Prot
Match: PURA_DESAA (Adenylosuccinate synthetase OS=Desulfatibacillum alkenivorans (strain AK-01) GN=purA PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.059e-16
Identity = 37/63 (58.73%), Postives = 46/63 (73.02%), Query Frame = 1
Query:   16 FPADLLLLEQLKVEYEVLPGWQSDISSVRNYSDLPKGAREFVERIEELVGVPINYIGVGPGRD 204
            FPADL +L + K  YE +PGW  DIS VRN+ DLP+ AR ++ R+EEL+G PI  I VGPGRD
Sbjct:  357 FPADLKVLAKCKPVYETMPGWTEDISGVRNFDDLPENARNYLNRVEELLGAPIKIISVGPGRD 419          
BLAST of EG358229 vs. ExPASy Swiss-Prot
Match: PURA_YEAST (Adenylosuccinate synthetase OS=Saccharomyces cerevisiae GN=ADE12 PE=1 SV=3)

HSP 1 Score: 82.0333 bits (201), Expect = 1.022e-15
Identity = 31/68 (45.59%), Postives = 53/68 (77.94%), Query Frame = 1
Query:   16 FPADLLLLEQLKVEYEVLPGWQSDISSVRNYSDLPKGAREFVERIEELVGVPINYIGVGPGRDALIYK 219
            FP DL +L +++VEY+VLPGW  DI+ +  Y DLP+ A+++++ IE+ VGVP+ ++G GP R+++++K
Sbjct:  363 FPEDLNILGKVEVEYKVLPGWDQDITKITKYEDLPENAKKYLKYIEDFVGVPVEWVGTGPARESMLHK 430          
BLAST of EG358229 vs. ExPASy Swiss-Prot
Match: PURA_SCHPO (Adenylosuccinate synthetase OS=Schizosaccharomyces pombe GN=ade2 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 1.476e-14
Identity = 31/71 (43.66%), Postives = 52/71 (73.24%), Query Frame = 1
Query:    7 VKSFPADLLLLEQLKVEYEVLPGWQSDISSVRNYSDLPKGAREFVERIEELVGVPINYIGVGPGRDALIYK 219
            +++FPADL  LE+ ++ YE  PGW+   + + ++  +P+ A++++E IE+ VGVPI +IGVGPGRD ++ K
Sbjct:  363 IETFPADLDSLEEAEIVYETFPGWKVPTTGITHWDQMPENAKKYIEFIEKFVGVPITFIGVGPGRDEMLVK 433          
BLAST of EG358229 vs. ExPASy Swiss-Prot
Match: PURA_DICDI (Adenylosuccinate synthetase OS=Dictyostelium discoideum GN=purA PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.476e-14
Identity = 39/69 (56.52%), Postives = 47/69 (68.12%), Query Frame = 1
Query:    7 VKSFPADLLLLEQLKVEYEVLPGWQSDISSVRNYSDLPKGAREFVERIEELVGVPINYIGVGPGRDALI 213
            +KSFPA L  L Q +V YE  PGW+ D+S V  Y  LP  A+ +++RIEELVGVPI YIGVG  R  LI
Sbjct:  353 IKSFPASLETLAQCEVVYESFPGWKCDLSHVTEYDQLPIQAKNYIKRIEELVGVPIVYIGVGVERKNLI 421          
BLAST of EG358229 vs. ExPASy Swiss-Prot
Match: PURA1_METAC (Adenylosuccinate synthetase 1 OS=Methanosarcina acetivorans GN=purA1 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.927e-14
Identity = 35/68 (51.47%), Postives = 48/68 (70.59%), Query Frame = 1
Query:   16 FPADLLLLEQLKVEYEVLPGWQSDISSVRNYSDLPKGAREFVERIEELVGVPINYIGVGPGRDALIYK 219
            FP D  +L Q+K EYE LPGW+     V ++ DLP+ A+ +++RIEELVGVP+ YIGVGP R  +I +
Sbjct:  358 FP-DTEILGQVKAEYETLPGWECTTRGVNSFDDLPENAKSYIKRIEELVGVPVKYIGVGPARSDVIIR 424          
BLAST of EG358229 vs. ExPASy Swiss-Prot
Match: PURA_HALOH (Adenylosuccinate synthetase OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=purA PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.293e-14
Identity = 34/69 (49.28%), Postives = 47/69 (68.12%), Query Frame = 1
Query:    7 VKSFPADLLLLEQLKVEYEVLPGWQSDISSVRNYSDLPKGAREFVERIEELVGVPINYIGVGPGRDALI 213
            ++ FP ++ +L   +  YEVLPGW  DI+ VR Y DLP+ AR +V+ IE++V VP+  IGVGPGR   I
Sbjct:  353 IEEFPGNIDILSGCEPVYEVLPGWDDDITGVREYGDLPENARRYVKLIEDMVKVPVTIIGVGPGRKEAI 421          
BLAST of EG358229 vs. ExPASy Swiss-Prot
Match: PURA_GEOMG (Adenylosuccinate synthetase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=purA PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.607e-14
Identity = 33/70 (47.14%), Postives = 48/70 (68.57%), Query Frame = 1
Query:    4 PVKSFPADLLLLEQLKVEYEVLPGWQSDISSVRNYSDLPKGAREFVERIEELVGVPINYIGVGPGRDALI 213
            PV+  PA+L + E+ +  YE +PGW+SDI  VR + DLP+ AR +V R++EL+  PI  + +GPGRD  I
Sbjct:  354 PVEDLPANLAVFEKCQPVYEEMPGWKSDIRGVRRFEDLPEKARLYVHRLQELISCPIVLVSIGPGRDETI 423          
The following BLAST results are available for this feature:
BLAST of EG358229 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
PURA_ARATH1.125e-3084.93Adenylosuccinate synthetase, chloroplastic OS=Arab... [more]
PURA_MAIZE1.423e-2576.06Adenylosuccinate synthetase, chloroplastic OS=Zea ... [more]
PURA_WHEAT1.858e-2574.65Adenylosuccinate synthetase, chloroplastic (Fragme... [more]
PURA_DESAA2.059e-1658.73Adenylosuccinate synthetase OS=Desulfatibacillum a... [more]
PURA_YEAST1.022e-1545.59Adenylosuccinate synthetase OS=Saccharomyces cerev... [more]
PURA_SCHPO1.476e-1443.66Adenylosuccinate synthetase OS=Schizosaccharomyces... [more]
PURA_DICDI1.476e-1456.52Adenylosuccinate synthetase OS=Dictyostelium disco... [more]
PURA1_METAC1.927e-1451.47Adenylosuccinate synthetase 1 OS=Methanosarcina ac... [more]
PURA_HALOH4.293e-1449.28Adenylosuccinate synthetase OS=Halothermothrix ore... [more]
PURA_GEOMG5.607e-1447.14Adenylosuccinate synthetase OS=Geobacter metallire... [more]

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Properties
Property NameValue
Genbank description11b10 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl011b10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358229 ID=EG358229; Name=EG358229; organism=Citrus sinensis; type=EST; length=352bp
ACACCAGTCAAATCATTCCCTGCAGATCTTCTACTGCTTGAGCAATTGAA
GGTCGAGTATGAAGTTTTACCCGGGTGGCAGTCTGATATCTCTTCTGTTA
GAAACTACTCAGACCTGCCAAAGGGAGCACGTGAGTTCGTGGAGAGGATA
GAAGAACTTGTTGGCGTTCCAATCAATTATATTGGCGTTGGACCTGGGCG
TGATGCTCTCATATACAAGTAGGATAACAATTGAAGTTGCAGTGCTCCAT
AAAGCTTTCAAGGAATTTTAATTGAATTTATTCCCTAGTTATATACTTGA
CAGAGATTTTGGGGGCAAAGCAGAATTTGATTTAGTTTACATGAATTTAG
TG
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