EG358223

Overview
NameEG358223
Unique NameEG358223
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length389
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EG358223_ssr219 microsatellite EG358223_ssr219:219..230. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig3822 contig Csv1_Contig3822:859..1247. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EG358223 vs. ExPASy Swiss-Prot
Match: LDOX_MALDO (Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.583e-21
Identity = 47/68 (69.12%), Postives = 54/68 (79.41%), Query Frame = 3
Query:    3 KSILHRGLVNKEKVRISWAVFCEXXXXXXXXXXXXETVSEQKPAMFPPRTFQQHIEHKLFRRTQDALL 206
            KSILHRG+VNKEKVRISWAVFCE            ETVSE +PAMFPPRTF +HI+HKLFR++Q+ALL
Sbjct:  288 KSILHRGMVNKEKVRISWAVFCEPPKEKIILKPLPETVSEDEPAMFPPRTFAEHIQHKLFRKSQEALL 355          
BLAST of EG358223 vs. ExPASy Swiss-Prot
Match: LDOX_ARATH (Leucoanthocyanidin dioxygenase OS=Arabidopsis thaliana GN=LDOX PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.470e-19
Identity = 45/71 (63.38%), Postives = 51/71 (71.83%), Query Frame = 3
Query:    3 KSILHRGLVNKEKVRISWAVFCEXXXXXXXXXXXXETVSEQKPAMFPPRTFQQHIEHKLFRRTQDALLSDE 215
            KSILHRGLVNKEKVRISWAVFCE            E VS + PA FPPRTF QHIEHKLF + Q+ L+S++
Sbjct:  284 KSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLFGKEQEELVSEK 354          
BLAST of EG358223 vs. ExPASy Swiss-Prot
Match: LDOX_PERFR (Leucoanthocyanidin dioxygenase OS=Perilla frutescens GN=ANS PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.839e-18
Identity = 44/67 (65.67%), Postives = 48/67 (71.64%), Query Frame = 3
Query:    3 KSILHRGLVNKEKVRISWAVFCEXXXXXXXXXXXXETVSEQKPAMFPPRTFQQHIEHKLFRRTQDAL 203
            KSILHRGLVNKEKVRISWAVFCE            ETVSE +P  FPPRTF QH++HKLFR+T   L
Sbjct:  290 KSILHRGLVNKEKVRISWAVFCEPPKEKIVLQPLPETVSEVEPPRFPPRTFAQHLKHKLFRKTDGDL 356          
BLAST of EG358223 vs. ExPASy Swiss-Prot
Match: LDOX_PETHY (Leucoanthocyanidin dioxygenase OS=Petunia hybrida GN=ANT17 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.532e-16
Identity = 38/62 (61.29%), Postives = 44/62 (70.97%), Query Frame = 3
Query:    3 KSILHRGLVNKEKVRISWAVFCEXXXXXXXXXXXXETVSEQKPAMFPPRTFQQHIEHKLFRR 188
            KSILHRG+VNKEKVR SWA+FCE            ETV+E +P  FPPRTF QH+ HKLFR+
Sbjct:  288 KSILHRGVVNKEKVRFSWAIFCEPPKEKIILKPLPETVTEAEPPRFPPRTFAQHMAHKLFRK 349          
BLAST of EG358223 vs. ExPASy Swiss-Prot
Match: LDOX_MAIZE (Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.234e-13
Identity = 36/71 (50.70%), Postives = 44/71 (61.97%), Query Frame = 3
Query:    6 SILHRGLVNKEKVRISWAVFCEXXXXXXXXXXXXETVSEQKPAMFPPRTFQQHIEHKLFRRTQDALLSDEE 218
            S+LHRGLVN+E VRISW VFCE            E V+E  PA F PRTF+QH++ KLF++ Q      EE
Sbjct:  307 SVLHRGLVNREAVRISWVVFCEPPPDSVLLHPLPELVTEGHPARFTPRTFKQHLDRKLFKKKQQHKAKAEE 377          
The following BLAST results are available for this feature:
BLAST of EG358223 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
LDOX_MALDO3.583e-2169.12Leucoanthocyanidin dioxygenase OS=Malus domestica ... [more]
LDOX_ARATH7.470e-1963.38Leucoanthocyanidin dioxygenase OS=Arabidopsis thal... [more]
LDOX_PERFR2.839e-1865.67Leucoanthocyanidin dioxygenase OS=Perilla frutesce... [more]
LDOX_PETHY4.532e-1661.29Leucoanthocyanidin dioxygenase OS=Petunia hybrida ... [more]
LDOX_MAIZE1.234e-1350.70Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 P... [more]
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Properties
Property NameValue
Genbank description1f3 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0001f3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358223 ID=EG358223; Name=EG358223; organism=Citrus sinensis; type=EST; length=389bp
ACAAGAGTATTCTTCACAGGGGACTTGTTAACAAGGAAAAGGTTAGGATC
TCGTGGGCTGTTTTCTGTGAGCCACCGAAGGACAAGATTATCCTCAAGCC
TCTCCCGGAAACTGTCTCTGAGCAAAAGCCGGCAATGTTCCCTCCTCGCA
CCTTTCAACAGCACATTGAGCACAAGCTGTTTAGGAGGACGCAGGATGCT
CTCCTCTCCGATGAAGAATAATTAATTAATCGGATTTCTTATTATGTTTA
ATCTTCCGGTGAATGCTTTCACTACAGCACTTGTAGGCCATATTTTTGGC
TCTTTGTTTCGTCTGTGCCGGCTGGCTTTATTGAATAATAAGATTGATTA
TTTTCGCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG
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