FC921982
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921982 vs. ExPASy Swiss-Prot
Match: RLA0_LUPLU (60S acidic ribosomal protein P0 OS=Lupinus luteus PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.161e-17 Identity = 44/54 (81.48%), Postives = 48/54 (88.89%), Query Frame = -3 Query: 48 GSKQLQNIRRGLRGDSVVLMGKNTKMKRTLF*NAEKTGNTAFLNLIPLFQGNVG 209 GSKQLQNIR+GLRGDSVVLMGKNT MKR++ +AEKTGN AFLNLIPL GNVG Sbjct: 37 GSKQLQNIRQGLRGDSVVLMGKNTMMKRSVRIHAEKTGNQAFLNLIPLLIGNVG 90 HSP 2 Score: 22.3274 bits (46), Expect = 1.161e-17 Identity = 10/12 (83.33%), Postives = 10/12 (83.33%), Query Frame = -1 Query: 206 TQILVAAADNVG 241 TQILV ADNVG Sbjct: 26 TQILVVNADNVG 37
BLAST of FC921982 vs. ExPASy Swiss-Prot
Match: RLA0_SOYBN (60S acidic ribosomal protein P0 OS=Glycine max PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.561e-16 Identity = 42/54 (77.78%), Postives = 47/54 (87.04%), Query Frame = -3 Query: 48 GSKQLQNIRRGLRGDSVVLMGKNTKMKRTLF*NAEKTGNTAFLNLIPLFQGNVG 209 GS QLQNIR+GLRGDSVVLMGKNT MKR++ +AEKTGN A+LNLIPL GNVG Sbjct: 37 GSNQLQNIRKGLRGDSVVLMGKNTMMKRSVRMHAEKTGNNAYLNLIPLLVGNVG 90
BLAST of FC921982 vs. ExPASy Swiss-Prot
Match: RLA02_ARATH (60S acidic ribosomal protein P0-2 OS=Arabidopsis thaliana GN=RPP0B PE=1 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 2.663e-16 Identity = 41/54 (75.93%), Postives = 47/54 (87.04%), Query Frame = -3 Query: 48 GSKQLQNIRRGLRGDSVVLMGKNTKMKRTLF*NAEKTGNTAFLNLIPLFQGNVG 209 GS QLQNIR+GLRGDSVVLMGKNT MKR++ ++E TGNTA LNL+PL QGNVG Sbjct: 36 GSTQLQNIRKGLRGDSVVLMGKNTMMKRSVRIHSENTGNTAILNLLPLLQGNVG 89
BLAST of FC921982 vs. ExPASy Swiss-Prot
Match: RLA01_ARATH (60S acidic ribosomal protein P0-1 OS=Arabidopsis thaliana GN=RPP0A PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.663e-16 Identity = 41/54 (75.93%), Postives = 48/54 (88.89%), Query Frame = -3 Query: 48 GSKQLQNIRRGLRGDSVVLMGKNTKMKRTLF*NAEKTGNTAFLNLIPLFQGNVG 209 GS QLQNIR+GLRGDSVVLMGKNT MKR++ +A+KTGN AFL+L+PL QGNVG Sbjct: 37 GSTQLQNIRKGLRGDSVVLMGKNTMMKRSVRIHADKTGNQAFLSLLPLLQGNVG 90
BLAST of FC921982 vs. ExPASy Swiss-Prot
Match: RLA03_ARATH (60S acidic ribosomal protein P0-3 OS=Arabidopsis thaliana GN=RPP0C PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.749e-16 Identity = 40/54 (74.07%), Postives = 47/54 (87.04%), Query Frame = -3 Query: 48 GSKQLQNIRRGLRGDSVVLMGKNTKMKRTLF*NAEKTGNTAFLNLIPLFQGNVG 209 GS QLQNIR+GLRGDSVVLMGKNT MKR++ ++E +GNTA LNL+PL QGNVG Sbjct: 36 GSTQLQNIRKGLRGDSVVLMGKNTMMKRSVRIHSENSGNTAILNLLPLLQGNVG 89
BLAST of FC921982 vs. ExPASy Swiss-Prot
Match: RLA0_ORYSJ (60S acidic ribosomal protein P0 OS=Oryza sativa subsp. japonica GN=Os08g0130500 PE=1 SV=3) HSP 1 Score: 70.8626 bits (172), Expect = 1.986e-12 Identity = 34/54 (62.96%), Postives = 42/54 (77.78%), Query Frame = -3 Query: 48 GSKQLQNIRRGLRGDSVVLMGKNTKMKRTLF*NAEKTGNTAFLNLIPLFQGNVG 209 GS QLQ IR+GLRGDS+VLMGKNT ++R + +A+ TGN FL L+PL GNVG Sbjct: 37 GSNQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHADNTGNKEFLELMPLLVGNVG 90 HSP 2 Score: 20.4014 bits (41), Expect = 1.986e-12 Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = -1 Query: 5 KG*LKEVKEEV 37 KG LKEV+EEV Sbjct: 95 KGDLKEVREEV 105
BLAST of FC921982 vs. ExPASy Swiss-Prot
Match: RLA0_MAIZE (60S acidic ribosomal protein P0 OS=Zea mays GN=RP-P0 PE=1 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 4.348e-12 Identity = 37/54 (68.52%), Postives = 42/54 (77.78%), Query Frame = -3 Query: 48 GSKQLQNIRRGLRGDSVVLMGKNTKMKRTLF*NAEKTGNTAFLNLIPLFQGNVG 209 GSKQLQ+IRRGLRGDSVVLMGKNT ++R + AEKTGN F L+ L GNVG Sbjct: 37 GSKQLQDIRRGLRGDSVVLMGKNTLIRRCIKVYAEKTGNHTFDPLMDLLVGNVG 90 HSP 2 Score: 20.4014 bits (41), Expect = 4.348e-12 Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = -1 Query: 5 KG*LKEVKEEV 37 KG LKEV+EEV Sbjct: 95 KGDLKEVREEV 105
BLAST of FC921982 vs. ExPASy Swiss-Prot
Match: RLA0_CHERU (60S acidic ribosomal protein P0 OS=Chenopodium rubrum PE=2 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 4.556e-11 Identity = 34/54 (62.96%), Postives = 39/54 (72.22%), Query Frame = -3 Query: 48 GSKQLQNIRRGLRGDSVVLMGKNTKMKRTLF*NAEKTGNTAFLNLIPLFQGNVG 209 GS QLQ IR GLRGDS+VLMGKNT MKR++ +AE TGN N+ LF NVG Sbjct: 37 GSNQLQAIRIGLRGDSIVLMGKNTMMKRSIRLHAENTGNENLRNVEQLFLPNVG 90 HSP 2 Score: 22.7126 bits (47), Expect = 4.556e-11 Identity = 8/12 (66.67%), Postives = 12/12 (100.00%), Query Frame = -1 Query: 206 TQILVAAADNVG 241 +Q+L+A+ADNVG Sbjct: 26 SQVLIASADNVG 37 The following BLAST results are available for this feature:
BLAST of FC921982 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921982 ID=FC921982; Name=FC921982; organism=Citrus sinensis; type=EST; length=241bpback to top |